RNA–Protein interactions for RNA: ENST00000544909.5

PAAF1-215, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-215ENST00000544909 PANX3Q96QZ0 392 aa12.68□□□□□ -0.38
PAAF1-215ENST00000544909 PKMYT1Q99640 499 aa12.68□□□□□ -0.38
PAAF1-215ENST00000544909 THTPAQ9BU02 230 aa12.68□□□□□ -0.38
PAAF1-215ENST00000544909 C20orf96Q9NUD7 363 aaPredicted RBP12.68□□□□□ -0.38
PAAF1-215ENST00000544909 ZDHHC7Q9NXF8 308 aa12.68□□□□□ -0.38
PAAF1-215ENST00000544909 ST3GAL5Q9UNP4 418 aa12.68□□□□□ -0.38
PAAF1-215ENST00000544909 NEU3Q9UQ49 428 aa12.68□□□□□ -0.38
PAAF1-215ENST00000544909 ARL5CA6NH57 179 aa12.67□□□□□ -0.38
PAAF1-215ENST00000544909 MATN2O00339 956 aa12.67□□□□□ -0.38
PAAF1-215ENST00000544909 MATN3O15232 486 aa12.67□□□□□ -0.38
PAAF1-215ENST00000544909 HDAC3O15379 428 aa12.67□□□□□ -0.38
PAAF1-215ENST00000544909 DDHD2O94830 711 aa12.67□□□□□ -0.38
PAAF1-215ENST00000544909 TOP3BO95985 862 aaKnown RBP12.67□□□□□ -0.38
PAAF1-215ENST00000544909 ANPEPP15144 967 aa12.67□□□□□ -0.38
PAAF1-215ENST00000544909 IBSPP21815 317 aaPredicted RBP12.67□□□□□ -0.38
PAAF1-215ENST00000544909 GLDCP23378 1020 aa12.67□□□□□ -0.38
PAAF1-215ENST00000544909 CCR1P32246 355 aa12.67□□□□□ -0.38
PAAF1-215ENST00000544909 CLCNKBP51801 687 aa12.67□□□□□ -0.38
PAAF1-215ENST00000544909 DSG1Q02413 1049 aa12.67□□□□□ -0.38
PAAF1-215ENST00000544909 MTA1Q13330 715 aa12.67□□□□□ -0.38
PAAF1-215ENST00000544909 HSP90AA5PQ58FG0 334 aa12.67□□□□□ -0.38
PAAF1-215ENST00000544909 MAVSQ7Z434 540 aa12.67□□□□□ -0.38
PAAF1-215ENST00000544909 SERINC5Q86VE9 423 aa12.67□□□□□ -0.38
PAAF1-215ENST00000544909 ATPAF2Q8N5M1 289 aa12.67□□□□□ -0.38
PAAF1-215ENST00000544909 CPSF7Q8N684 471 aaKnown RBP12.67□□□□□ -0.38
PAAF1-215ENST00000544909 MICAL1Q8TDZ2 1067 aa12.67□□□□□ -0.38
PAAF1-215ENST00000544909 DQX1Q8TE96 717 aaKnown RBP12.67□□□□□ -0.38
PAAF1-215ENST00000544909 NDRG1Q92597 394 aaKnown RBP12.67□□□□□ -0.38
PAAF1-215ENST00000544909 MYLPFQ96A32 169 aa12.67□□□□□ -0.38
PAAF1-215ENST00000544909 GAD1Q99259 594 aa12.67□□□□□ -0.38
PAAF1-215ENST00000544909 FAM167BQ9BTA0 163 aa12.67□□□□□ -0.38
PAAF1-215ENST00000544909 ACE2Q9BYF1 805 aaPredicted RBP12.67□□□□□ -0.38
PAAF1-215ENST00000544909 ZNF395Q9H8N7 513 aaPredicted RBP12.67□□□□□ -0.38
PAAF1-215ENST00000544909 ANLNQ9NQW6 1124 aa12.67□□□□□ -0.38
PAAF1-215ENST00000544909 SQORQ9Y6N5 450 aa12.67□□□□□ -0.38
PAAF1-215ENST00000544909 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.67□□□□□ -0.38
PAAF1-215ENST00000544909 SYNJ2BP-COX16A0A087WUM0 186 aa12.67□□□□□ -0.38
PAAF1-215ENST00000544909 MANSC4A6NHS7 340 aaPredicted RBP12.67□□□□□ -0.38
PAAF1-215ENST00000544909 LYPLA1O75608 230 aaPredicted RBP12.67□□□□□ -0.38
PAAF1-215ENST00000544909 THRAP10827 490 aa12.67□□□□□ -0.38
PAAF1-215ENST00000544909 SATB1Q01826 763 aa12.67□□□□□ -0.38
PAAF1-215ENST00000544909 TNK2Q07912 1038 aa12.67□□□□□ -0.38
PAAF1-215ENST00000544909 HNRNPDQ14103 355 aaKnown RBP12.67□□□□□ -0.38
PAAF1-215ENST00000544909 UBAP2LQ14157 1087 aaKnown RBP12.67□□□□□ -0.38
PAAF1-215ENST00000544909 AFMIDQ63HM1 303 aa12.67□□□□□ -0.38
PAAF1-215ENST00000544909 KIAA0930Q6ICG6 404 aaPredicted RBP12.67□□□□□ -0.38
PAAF1-215ENST00000544909 GPRIN1Q7Z2K8 1008 aa12.67□□□□□ -0.38
PAAF1-215ENST00000544909 PIWIL4Q7Z3Z4 852 aaKnown RBP12.67□□□□□ -0.38
PAAF1-215ENST00000544909 TAC4Q86UU9 113 aa12.67□□□□□ -0.38
PAAF1-215ENST00000544909 PPHLN1Q8NEY8 458 aaKnown RBP12.67□□□□□ -0.38
PAAF1-215ENST00000544909 CALML6Q8TD86 181 aa12.67□□□□□ -0.38
PAAF1-215ENST00000544909 STYXQ8WUJ0 223 aa12.67□□□□□ -0.38
PAAF1-215ENST00000544909 NRG4Q8WWG1 115 aa12.67□□□□□ -0.38
PAAF1-215ENST00000544909 CCDC126Q96EE4 140 aa12.67□□□□□ -0.38
PAAF1-215ENST00000544909 MFSD3Q96ES6 412 aa12.67□□□□□ -0.38
PAAF1-215ENST00000544909 C1orf74Q96LT6 269 aa12.67□□□□□ -0.38
PAAF1-215ENST00000544909 AGAP3Q96P47 875 aa12.67□□□□□ -0.38
PAAF1-215ENST00000544909 SERPINI1Q99574 410 aa12.67□□□□□ -0.38
PAAF1-215ENST00000544909 CEP41Q9BYV8 373 aa12.67□□□□□ -0.38
PAAF1-215ENST00000544909 UPF3AQ9H1J1 476 aaKnown RBP12.67□□□□□ -0.38
PAAF1-215ENST00000544909 COG4Q9H9E3 785 aa12.67□□□□□ -0.38
PAAF1-215ENST00000544909 ARNT2Q9HBZ2 717 aa12.67□□□□□ -0.38
PAAF1-215ENST00000544909 TCF7L2Q9NQB0 619 aa12.67□□□□□ -0.38
PAAF1-215ENST00000544909 TMPRSS4Q9NRS4 437 aa12.67□□□□□ -0.38
PAAF1-215ENST00000544909 VPS45Q9NRW7 570 aa12.67□□□□□ -0.38
PAAF1-215ENST00000544909 COX16Q9P0S2 106 aa12.67□□□□□ -0.38
PAAF1-215ENST00000544909 SCOCQ9UIL1 159 aa12.67□□□□□ -0.38
PAAF1-215ENST00000544909 NR2E3Q9Y5X4 410 aa12.67□□□□□ -0.38
PAAF1-215ENST00000544909 TRIP12Q14669 1992 aaPredicted RBP12.66□□□□□ -0.38
PAAF1-215ENST00000544909 A0A087X1B8 175 aa12.66□□□□□ -0.38
PAAF1-215ENST00000544909 MAGEA13PA6NCF6 341 aa12.66□□□□□ -0.38
PAAF1-215ENST00000544909 NPHS1O60500 1241 aa12.66□□□□□ -0.38
PAAF1-215ENST00000544909 SLC2A3P11169 496 aa12.66□□□□□ -0.38
PAAF1-215ENST00000544909 RPL14P50914 215 aaKnown RBP12.66□□□□□ -0.38
PAAF1-215ENST00000544909 DNAJB13P59910 316 aa12.66□□□□□ -0.38
PAAF1-215ENST00000544909 TSPY1Q01534 308 aa12.66□□□□□ -0.38
PAAF1-215ENST00000544909 PPM1JQ5JR12 505 aa12.66□□□□□ -0.38
PAAF1-215ENST00000544909 AGMOQ6ZNB7 445 aa12.66□□□□□ -0.38
PAAF1-215ENST00000544909 FAM43BQ6ZT52 329 aaPredicted RBP12.66□□□□□ -0.38
PAAF1-215ENST00000544909 CMC1Q7Z7K0 106 aa12.66□□□□□ -0.38
PAAF1-215ENST00000544909 THEM5Q8N1Q8 247 aa12.66□□□□□ -0.38
PAAF1-215ENST00000544909 RP9Q8TA86 221 aaKnown RBP12.66□□□□□ -0.38
PAAF1-215ENST00000544909 PEX13Q92968 403 aa12.66□□□□□ -0.38
PAAF1-215ENST00000544909 FAR2Q96K12 515 aa12.66□□□□□ -0.38
PAAF1-215ENST00000544909 RANBP9Q96S59 729 aa12.66□□□□□ -0.38
PAAF1-215ENST00000544909 TBL1YQ9BQ87 522 aa12.66□□□□□ -0.38
PAAF1-215ENST00000544909 C1QTNF1Q9BXJ1 281 aa12.66□□□□□ -0.38
PAAF1-215ENST00000544909 GLOD4Q9HC38 313 aa12.66□□□□□ -0.38
PAAF1-215ENST00000544909 TBC1D13Q9NVG8 400 aa12.66□□□□□ -0.38
PAAF1-215ENST00000544909 FLRT1Q9NZU1 646 aa12.66□□□□□ -0.38
PAAF1-215ENST00000544909 SLC17A6Q9P2U8 582 aa12.66□□□□□ -0.38
PAAF1-215ENST00000544909 CDH22Q9UJ99 828 aa12.66□□□□□ -0.38
PAAF1-215ENST00000544909 A0A0U1RQF3 1178 aa12.65□□□□□ -0.38
PAAF1-215ENST00000544909 TARM1B6A8C7 271 aa12.65□□□□□ -0.38
PAAF1-215ENST00000544909 PEX1O43933 1283 aa12.65□□□□□ -0.38
PAAF1-215ENST00000544909 TADA2AO75478 443 aa12.65□□□□□ -0.38
PAAF1-215ENST00000544909 PAPSS2O95340 614 aaPredicted RBP12.65□□□□□ -0.38
PAAF1-215ENST00000544909 PENKP01210 267 aaPredicted RBP12.65□□□□□ -0.38
PAAF1-215ENST00000544909 JCHAINP01591 159 aa12.65□□□□□ -0.38
PAAF1-215ENST00000544909 HOXB8P17481 243 aaPredicted RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms