RNA–Protein interactions for RNA: ENST00000544778.6

BPTF-208, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 5

Gene BPTF, Length 7,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-208ENST00000544778 ACSM2BQ68CK6 577 aa20.31■□□□□ 0.84
BPTF-208ENST00000544778 DCLRE1BQ9H816 532 aa20.31■□□□□ 0.84
BPTF-208ENST00000544778 E7ENQ6 273 aa20.31■□□□□ 0.84
BPTF-208ENST00000544778 H0Y858 1186 aa20.31■□□□□ 0.84
BPTF-208ENST00000544778 LYNP07948 512 aa20.31■□□□□ 0.84
BPTF-208ENST00000544778 TGFBR2P37173 567 aa20.31■□□□□ 0.84
BPTF-208ENST00000544778 PCNX4Q63HM2 1172 aa20.31■□□□□ 0.84
BPTF-208ENST00000544778 NDUFA13Q9P0J0 144 aa20.31■□□□□ 0.84
BPTF-208ENST00000544778 NR2F1P10589 423 aa20.31■□□□□ 0.84
BPTF-208ENST00000544778 HSPA14Q0VDF9 509 aa20.31■□□□□ 0.84
BPTF-208ENST00000544778 MCRS1Q96EZ8 462 aa20.31■□□□□ 0.84
BPTF-208ENST00000544778 TRIM39Q9HCM9 518 aa20.31■□□□□ 0.84
BPTF-208ENST00000544778 GNPTGQ9UJJ9 305 aa20.31■□□□□ 0.84
BPTF-208ENST00000544778 LSM8O95777 96 aaKnown RBP20.3■□□□□ 0.84
BPTF-208ENST00000544778 FAM187BQ17R55 369 aa20.3■□□□□ 0.84
BPTF-208ENST00000544778 PPP1R3GB7ZBB8 358 aa20.3■□□□□ 0.84
BPTF-208ENST00000544778 FKBP6O75344 327 aa20.3■□□□□ 0.84
BPTF-208ENST00000544778 IKBKEQ14164 716 aa20.3■□□□□ 0.84
BPTF-208ENST00000544778 ISLR2Q6UXK2 745 aa20.3■□□□□ 0.84
BPTF-208ENST00000544778 ZNF563Q8TA94 476 aa20.3■□□□□ 0.84
BPTF-208ENST00000544778 HTR3CQ8WXA8 447 aa20.3■□□□□ 0.84
BPTF-208ENST00000544778 RNF208Q9H0X6 261 aa20.3■□□□□ 0.84
BPTF-208ENST00000544778 CPSF1Q10570 1443 aaKnown RBP20.3■□□□□ 0.84
BPTF-208ENST00000544778 IGFALSP35858 605 aa20.3■□□□□ 0.84
BPTF-208ENST00000544778 PFKFB4Q16877 469 aa20.3■□□□□ 0.84
BPTF-208ENST00000544778 POMZP3Q6PJE2 187 aa20.3■□□□□ 0.84
BPTF-208ENST00000544778 RASAL3Q86YV0 1011 aa20.3■□□□□ 0.84
BPTF-208ENST00000544778 SLC41A1Q8IVJ1 513 aa20.3■□□□□ 0.84
BPTF-208ENST00000544778 SLC38A2Q96QD8 506 aa20.3■□□□□ 0.84
BPTF-208ENST00000544778 KCNS3Q9BQ31 491 aa20.3■□□□□ 0.84
BPTF-208ENST00000544778 EPB41L1Q9H4G0 881 aa20.3■□□□□ 0.84
BPTF-208ENST00000544778 OSGEPQ9NPF4 335 aa20.3■□□□□ 0.84
BPTF-208ENST00000544778 UBE2QL1A1L167 161 aa20.3■□□□□ 0.84
BPTF-208ENST00000544778 INSRRP14616 1297 aa20.3■□□□□ 0.84
BPTF-208ENST00000544778 DMGDHQ9UI17 866 aaKnown RBP20.3■□□□□ 0.84
BPTF-208ENST00000544778 ZNF780BQ9Y6R6 833 aa20.3■□□□□ 0.84
BPTF-208ENST00000544778 NR2C2P49116 596 aa20.3■□□□□ 0.84
BPTF-208ENST00000544778 SMCO1Q147U7 214 aa20.3■□□□□ 0.84
BPTF-208ENST00000544778 GPR156Q8NFN8 814 aa20.3■□□□□ 0.84
BPTF-208ENST00000544778 HMX1Q9NP08 348 aaPredicted RBP20.3■□□□□ 0.84
BPTF-208ENST00000544778 POLR1AO95602 1720 aaPredicted RBP20.3■□□□□ 0.84
BPTF-208ENST00000544778 GNRH1P01148 92 aa20.3■□□□□ 0.84
BPTF-208ENST00000544778 FAM228BP0C875 321 aa20.3■□□□□ 0.84
BPTF-208ENST00000544778 ATP5F1P24539 256 aaPredicted RBP20.3■□□□□ 0.84
BPTF-208ENST00000544778 FAIM2Q9BWQ8 316 aa20.3■□□□□ 0.84
BPTF-208ENST00000544778 MRPL9Q9BYD2 267 aaKnown RBP20.3■□□□□ 0.84
BPTF-208ENST00000544778 TP73O15350 636 aa20.29■□□□□ 0.84
BPTF-208ENST00000544778 PCDHA3Q9Y5H8 950 aa20.29■□□□□ 0.84
BPTF-208ENST00000544778 LRPAP1P30533 357 aa20.29■□□□□ 0.84
BPTF-208ENST00000544778 CTNNB1P35222 781 aa20.29■□□□□ 0.84
BPTF-208ENST00000544778 RBM43Q6ZSC3 357 aaKnown RBP20.29■□□□□ 0.84
BPTF-208ENST00000544778 ATAD3AQ9NVI7 634 aa20.29■□□□□ 0.84
BPTF-208ENST00000544778 URADA6NGE7 173 aa20.29■□□□□ 0.84
BPTF-208ENST00000544778 TRDMT1O14717 391 aaKnown RBP20.29■□□□□ 0.84
BPTF-208ENST00000544778 MRASO14807 208 aa20.29■□□□□ 0.84
BPTF-208ENST00000544778 PSIP1O75475 530 aaKnown RBP20.29■□□□□ 0.84
BPTF-208ENST00000544778 CHRNGP07510 517 aa20.29■□□□□ 0.84
BPTF-208ENST00000544778 ITPKBP27987 946 aa20.29■□□□□ 0.84
BPTF-208ENST00000544778 CBX5P45973 191 aa20.29■□□□□ 0.84
BPTF-208ENST00000544778 USP41Q3LFD5 358 aa20.29■□□□□ 0.84
BPTF-208ENST00000544778 INO80DQ53TQ3 878 aaPredicted RBP20.29■□□□□ 0.84
BPTF-208ENST00000544778 CRISPLD1Q9H336 500 aa20.29■□□□□ 0.84
BPTF-208ENST00000544778 ISM1B1AKI9 464 aa20.29■□□□□ 0.84
BPTF-208ENST00000544778 TUFMP49411 452 aaKnown RBP20.29■□□□□ 0.84
BPTF-208ENST00000544778 NEK5Q6P3R8 708 aa20.29■□□□□ 0.84
BPTF-208ENST00000544778 ELOA2Q8IYF1 753 aaPredicted RBP20.29■□□□□ 0.84
BPTF-208ENST00000544778 VPS35Q96QK1 796 aa20.29■□□□□ 0.84
BPTF-208ENST00000544778 DUSP10Q9Y6W6 482 aa20.29■□□□□ 0.84
BPTF-208ENST00000544778 A0A096LPK6 155 aa20.29■□□□□ 0.84
BPTF-208ENST00000544778 TPP2P29144 1249 aaPredicted RBP20.29■□□□□ 0.84
BPTF-208ENST00000544778 KDM7AQ6ZMT4 941 aa20.29■□□□□ 0.84
BPTF-208ENST00000544778 RASSF1Q9NS23 344 aa20.29■□□□□ 0.84
BPTF-208ENST00000544778 F8VZ95 297 aa20.29■□□□□ 0.84
BPTF-208ENST00000544778 TFPIP10646 304 aa20.29■□□□□ 0.84
BPTF-208ENST00000544778 PRCCQ92733 491 aaPredicted RBP20.29■□□□□ 0.84
BPTF-208ENST00000544778 C9orf16Q9BUW7 83 aa20.29■□□□□ 0.84
BPTF-208ENST00000544778 RNF19AQ9NV58 838 aa20.29■□□□□ 0.84
BPTF-208ENST00000544778 ERCC2P18074 760 aa20.28■□□□□ 0.84
BPTF-208ENST00000544778 SNRPD1P62314 119 aaKnown RBP20.28■□□□□ 0.84
BPTF-208ENST00000544778 POU5F2Q8N7G0 328 aa20.28■□□□□ 0.84
BPTF-208ENST00000544778 FAM98AQ8NCA5 519 aaKnown RBP20.28■□□□□ 0.84
BPTF-208ENST00000544778 TMBIM4Q9HC24 238 aa20.28■□□□□ 0.84
BPTF-208ENST00000544778 MYBPC2Q14324 1141 aa20.28■□□□□ 0.84
BPTF-208ENST00000544778 NRF1Q16656 503 aa20.28■□□□□ 0.84
BPTF-208ENST00000544778 ELOVL4Q9GZR5 314 aa20.28■□□□□ 0.84
BPTF-208ENST00000544778 TBL1XO60907 577 aa20.28■□□□□ 0.84
BPTF-208ENST00000544778 AVILO75366 819 aa20.28■□□□□ 0.84
BPTF-208ENST00000544778 TATDN2Q93075 761 aa20.28■□□□□ 0.84
BPTF-208ENST00000544778 ZNF214Q9UL59 606 aaPredicted RBP20.28■□□□□ 0.84
BPTF-208ENST00000544778 ATXN2Q99700 1313 aaKnown RBP20.28■□□□□ 0.84
BPTF-208ENST00000544778 QRICH2Q9H0J4 1663 aa20.28■□□□□ 0.84
BPTF-208ENST00000544778 A0A1W2PRG6 482 aa20.28■□□□□ 0.84
BPTF-208ENST00000544778 ELK3P41970 407 aa20.28■□□□□ 0.84
BPTF-208ENST00000544778 ABRQ12979 859 aa20.28■□□□□ 0.84
BPTF-208ENST00000544778 RBM23Q86U06 439 aaKnown RBP20.28■□□□□ 0.84
BPTF-208ENST00000544778 ADHFE1Q8IWW8 467 aa20.28■□□□□ 0.84
BPTF-208ENST00000544778 TAS1R2Q8TE23 839 aa20.28■□□□□ 0.84
BPTF-208ENST00000544778 ASB8Q9H765 288 aa20.28■□□□□ 0.84
BPTF-208ENST00000544778 OR5F1O95221 314 aa20.28■□□□□ 0.84
BPTF-208ENST00000544778 EXOC3L1Q86VI1 746 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms