RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 HS3ST4Q9Y661 456 aa16.65■□□□□ 0.26
DDX55-212ENST00000544738 PTPN13Q12923 2485 aa16.64■□□□□ 0.26
DDX55-212ENST00000544738 LRRC72A6NJI9 287 aa16.64■□□□□ 0.25
DDX55-212ENST00000544738 F8VZ95 297 aa16.64■□□□□ 0.25
DDX55-212ENST00000544738 GOLGA6L22H0YM25 854 aa16.64■□□□□ 0.25
DDX55-212ENST00000544738 MID1O15344 667 aa16.64■□□□□ 0.25
DDX55-212ENST00000544738 RNASEH2AO75792 299 aaKnown RBP16.64■□□□□ 0.25
DDX55-212ENST00000544738 C5AR1P21730 350 aa16.64■□□□□ 0.25
DDX55-212ENST00000544738 MZF1P28698 734 aaPredicted RBP16.64■□□□□ 0.25
DDX55-212ENST00000544738 CDH4P55283 916 aa16.64■□□□□ 0.25
DDX55-212ENST00000544738 RACK1P63244 317 aaKnown RBP16.64■□□□□ 0.25
DDX55-212ENST00000544738 DEUP1Q05D60 604 aa16.64■□□□□ 0.25
DDX55-212ENST00000544738 ELAVL3Q14576 367 aaKnown RBP16.64■□□□□ 0.25
DDX55-212ENST00000544738 FKBP15Q5T1M5 1219 aa16.64■□□□□ 0.25
DDX55-212ENST00000544738 FAM102AQ5T9C2 384 aaPredicted RBP16.64■□□□□ 0.25
DDX55-212ENST00000544738 CDKAL1Q5VV42 579 aa16.64■□□□□ 0.25
DDX55-212ENST00000544738 TAF3Q5VWG9 929 aa16.64■□□□□ 0.25
DDX55-212ENST00000544738 KIAA0895LQ68EN5 471 aa16.64■□□□□ 0.25
DDX55-212ENST00000544738 CXorf57Q6NSI4 855 aaKnown RBP16.64■□□□□ 0.25
DDX55-212ENST00000544738 RBM43Q6ZSC3 357 aaKnown RBP16.64■□□□□ 0.25
DDX55-212ENST00000544738 DSG4Q86SJ6 1040 aa16.64■□□□□ 0.25
DDX55-212ENST00000544738 XYLT1Q86Y38 959 aa16.64■□□□□ 0.25
DDX55-212ENST00000544738 TSC1Q92574 1164 aa16.64■□□□□ 0.25
DDX55-212ENST00000544738 SKA1Q96BD8 255 aa16.64■□□□□ 0.25
DDX55-212ENST00000544738 SLC6A18Q96N87 628 aa16.64■□□□□ 0.25
DDX55-212ENST00000544738 FEM1AQ9BSK4 669 aa16.64■□□□□ 0.25
DDX55-212ENST00000544738 TKTL2Q9H0I9 626 aa16.64■□□□□ 0.25
DDX55-212ENST00000544738 VPS16Q9H269 839 aa16.64■□□□□ 0.25
DDX55-212ENST00000544738 NEUROG2Q9H2A3 272 aa16.64■□□□□ 0.25
DDX55-212ENST00000544738 ARHGEF38Q9NXL2 777 aa16.64■□□□□ 0.25
DDX55-212ENST00000544738 SLC25A13Q9UJS0 675 aa16.64■□□□□ 0.25
DDX55-212ENST00000544738 TBC1D30Q9Y2I9 924 aa16.64■□□□□ 0.25
DDX55-212ENST00000544738 MYLKQ15746 1914 aa16.63■□□□□ 0.25
DDX55-212ENST00000544738 A0A1W2PP55 124 aa16.63■□□□□ 0.25
DDX55-212ENST00000544738 GOT1P17174 413 aa16.63■□□□□ 0.25
DDX55-212ENST00000544738 STK19P49842 368 aaPredicted RBP16.63■□□□□ 0.25
DDX55-212ENST00000544738 SULT1E1P49888 294 aa16.63■□□□□ 0.25
DDX55-212ENST00000544738 GALCP54803 685 aa16.63■□□□□ 0.25
DDX55-212ENST00000544738 CENPCQ03188 943 aa16.63■□□□□ 0.25
DDX55-212ENST00000544738 KRT31Q15323 416 aa16.63■□□□□ 0.25
DDX55-212ENST00000544738 SHBQ15464 509 aa16.63■□□□□ 0.25
DDX55-212ENST00000544738 LRRC31Q6UY01 552 aa16.63■□□□□ 0.25
DDX55-212ENST00000544738 KDM7AQ6ZMT4 941 aa16.63■□□□□ 0.25
DDX55-212ENST00000544738 ARCQ7LC44 396 aa16.63■□□□□ 0.25
DDX55-212ENST00000544738 NOP9Q86U38 636 aaKnown RBP16.63■□□□□ 0.25
DDX55-212ENST00000544738 STK40Q8N2I9 435 aa16.63■□□□□ 0.25
DDX55-212ENST00000544738 ANKRD20A12PQ8NF67 263 aa16.63■□□□□ 0.25
DDX55-212ENST00000544738 EPS8L1Q8TE68 723 aa16.63■□□□□ 0.25
DDX55-212ENST00000544738 ALG14Q96F25 216 aa16.63■□□□□ 0.25
DDX55-212ENST00000544738 C1orf74Q96LT6 269 aa16.63■□□□□ 0.25
DDX55-212ENST00000544738 SPAG5Q96R06 1193 aa16.63■□□□□ 0.25
DDX55-212ENST00000544738 ORAI3Q9BRQ5 295 aa16.63■□□□□ 0.25
DDX55-212ENST00000544738 AASDHPPTQ9NRN7 309 aa16.63■□□□□ 0.25
DDX55-212ENST00000544738 VPS28Q9UK41 221 aa16.63■□□□□ 0.25
DDX55-212ENST00000544738 UNC79Q9P2D8 2635 aa16.62■□□□□ 0.25
DDX55-212ENST00000544738 A0A1W2PPC4 97 aa16.62■□□□□ 0.25
DDX55-212ENST00000544738 ADCY5O95622 1261 aa16.62■□□□□ 0.25
DDX55-212ENST00000544738 IL1BP01584 269 aa16.62■□□□□ 0.25
DDX55-212ENST00000544738 IGHV4-34P06331 123 aa16.62■□□□□ 0.25
DDX55-212ENST00000544738 PSMD8P48556 350 aa16.62■□□□□ 0.25
DDX55-212ENST00000544738 UCNP55089 124 aa16.62■□□□□ 0.25
DDX55-212ENST00000544738 PCBP4P57723 403 aaKnown RBP16.62■□□□□ 0.25
DDX55-212ENST00000544738 KRT83P78385 493 aa16.62■□□□□ 0.25
DDX55-212ENST00000544738 SRSF1Q07955 248 aaKnown RBP eCLIP16.62■□□□□ 0.259e-8■■■□□ 16.2
DDX55-212ENST00000544738 BNIP3Q12983 259 aa16.62■□□□□ 0.25
DDX55-212ENST00000544738 ACCSLQ4AC99 568 aa16.62■□□□□ 0.25
DDX55-212ENST00000544738 OTUD1Q5VV17 481 aaPredicted RBP16.62■□□□□ 0.25
DDX55-212ENST00000544738 FAM46CQ5VWP2 391 aa16.62■□□□□ 0.25
DDX55-212ENST00000544738 NCEH1Q6PIU2 408 aa16.62■□□□□ 0.25
DDX55-212ENST00000544738 SASS6Q6UVJ0 657 aa16.62■□□□□ 0.25
DDX55-212ENST00000544738 PRICKLE2Q7Z3G6 844 aa16.62■□□□□ 0.25
DDX55-212ENST00000544738 OR2T34Q8NGX1 318 aa16.62■□□□□ 0.25
DDX55-212ENST00000544738 FRS2Q8WU20 508 aa16.62■□□□□ 0.25
DDX55-212ENST00000544738 CPA5Q8WXQ8 436 aa16.62■□□□□ 0.25
DDX55-212ENST00000544738 OR8D1Q8WZ84 308 aa16.62■□□□□ 0.25
DDX55-212ENST00000544738 TBCBQ99426 244 aa16.62■□□□□ 0.25
DDX55-212ENST00000544738 GANQ9H2C0 597 aa16.62■□□□□ 0.25
DDX55-212ENST00000544738 ANO10Q9NW15 660 aa16.62■□□□□ 0.25
DDX55-212ENST00000544738 SERGEFQ9UGK8 458 aa16.62■□□□□ 0.25
DDX55-212ENST00000544738 GOLGA8SH3BPF8 625 aa16.61■□□□□ 0.25
DDX55-212ENST00000544738 ALOX15BO15296 676 aa16.61■□□□□ 0.25
DDX55-212ENST00000544738 ATP9BO43861 1147 aa16.61■□□□□ 0.25
DDX55-212ENST00000544738 WNT1P04628 370 aa16.61■□□□□ 0.25
DDX55-212ENST00000544738 MMEP08473 750 aa16.61■□□□□ 0.25
DDX55-212ENST00000544738 ZNF18P17022 549 aa16.61■□□□□ 0.25
DDX55-212ENST00000544738 CKMT2P17540 419 aa16.61■□□□□ 0.25
DDX55-212ENST00000544738 TFE3P19532 575 aaPredicted RBP16.61■□□□□ 0.25
DDX55-212ENST00000544738 CCR5P51681 352 aa16.61■□□□□ 0.25
DDX55-212ENST00000544738 POLR2FP61218 127 aaKnown RBP16.61■□□□□ 0.25
DDX55-212ENST00000544738 NOMO3P69849 1222 aa16.61■□□□□ 0.25
DDX55-212ENST00000544738 INSM1Q01101 510 aaPredicted RBP16.61■□□□□ 0.25
DDX55-212ENST00000544738 ILKQ13418 452 aa16.61■□□□□ 0.25
DDX55-212ENST00000544738 NAA35Q5VZE5 725 aa16.61■□□□□ 0.25
DDX55-212ENST00000544738 C14orf80Q86SX3 495 aa16.61■□□□□ 0.25
DDX55-212ENST00000544738 SETD3Q86TU7 594 aaPredicted RBP16.61■□□□□ 0.25
DDX55-212ENST00000544738 GPT2Q8TD30 523 aa16.61■□□□□ 0.25
DDX55-212ENST00000544738 C2orf49Q9BVC5 232 aaPredicted RBP16.61■□□□□ 0.25
DDX55-212ENST00000544738 MUC3BQ9H195 1237 aa16.61■□□□□ 0.25
DDX55-212ENST00000544738 GDF3Q9NR23 364 aa16.61■□□□□ 0.25
DDX55-212ENST00000544738 FAM207AQ9NSI2 230 aaPredicted RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms