RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 LRCH4O75427 683 aa6.78□□□□□ -1.32
CDCA3-209ENST00000544610 ZRANB2O95218 330 aaKnown RBP eCLIP6.78□□□□□ -1.32
CDCA3-209ENST00000544610 TRIM16O95361 564 aa6.78□□□□□ -1.32
CDCA3-209ENST00000544610 CALCAP01258 141 aa6.78□□□□□ -1.32
CDCA3-209ENST00000544610 CFIP05156 583 aa6.78□□□□□ -1.32
CDCA3-209ENST00000544610 RALAP11233 206 aa6.78□□□□□ -1.32
CDCA3-209ENST00000544610 HOXB2P14652 356 aa6.78□□□□□ -1.32
CDCA3-209ENST00000544610 PSMA2P25787 234 aa6.78□□□□□ -1.32
CDCA3-209ENST00000544610 MAPK1P28482 360 aa6.78□□□□□ -1.32
CDCA3-209ENST00000544610 NTSR1P30989 418 aa6.78□□□□□ -1.32
CDCA3-209ENST00000544610 RDXP35241 583 aaKnown RBP6.78□□□□□ -1.32
CDCA3-209ENST00000544610 FLT3P36888 993 aa6.78□□□□□ -1.32
CDCA3-209ENST00000544610 HCAR3P49019 387 aa6.78□□□□□ -1.32
CDCA3-209ENST00000544610 ATXN3P54252 364 aaPredicted RBP6.78□□□□□ -1.32
CDCA3-209ENST00000544610 NRG1Q02297 640 aaPredicted RBP6.78□□□□□ -1.32
CDCA3-209ENST00000544610 SLC25A11Q02978 314 aaKnown RBP6.78□□□□□ -1.32
CDCA3-209ENST00000544610 ZNF33AQ06730 810 aa6.78□□□□□ -1.32
CDCA3-209ENST00000544610 COL9A2Q14055 689 aaPredicted RBP6.78□□□□□ -1.32
CDCA3-209ENST00000544610 MESDQ14696 234 aa6.78□□□□□ -1.32
CDCA3-209ENST00000544610 TAZQ16635 292 aa6.78□□□□□ -1.32
CDCA3-209ENST00000544610 ANO4Q32M45 955 aa6.78□□□□□ -1.32
CDCA3-209ENST00000544610 CCDC14Q49A88 953 aa6.78□□□□□ -1.32
CDCA3-209ENST00000544610 OXLD1Q5BKU9 147 aa6.78□□□□□ -1.32
CDCA3-209ENST00000544610 BSPRYQ5W0U4 402 aa6.78□□□□□ -1.32
CDCA3-209ENST00000544610 EGFLAMQ63HQ2 1017 aa6.78□□□□□ -1.32
CDCA3-209ENST00000544610 BHLHA9Q7RTU4 235 aa6.78□□□□□ -1.32
CDCA3-209ENST00000544610 TMEM25Q86YD3 366 aa6.78□□□□□ -1.32
CDCA3-209ENST00000544610 MIB1Q86YT6 1006 aa6.78□□□□□ -1.32
CDCA3-209ENST00000544610 SLC41A1Q8IVJ1 513 aa6.78□□□□□ -1.32
CDCA3-209ENST00000544610 HDDC3Q8N4P3 179 aa6.78□□□□□ -1.32
CDCA3-209ENST00000544610 MINDY1Q8N5J2 469 aa6.78□□□□□ -1.32
CDCA3-209ENST00000544610 NAT16Q8N8M0 369 aa6.78□□□□□ -1.32
CDCA3-209ENST00000544610 SCAMP5Q8TAC9 235 aa6.78□□□□□ -1.32
CDCA3-209ENST00000544610 RXFP2Q8WXD0 754 aa6.78□□□□□ -1.32
CDCA3-209ENST00000544610 WBP2Q969T9 261 aa6.78□□□□□ -1.32
CDCA3-209ENST00000544610 AZIN2Q96A70 460 aa6.78□□□□□ -1.32
CDCA3-209ENST00000544610 SERPINB11Q96P15 392 aa6.78□□□□□ -1.32
CDCA3-209ENST00000544610 GABRG3Q99928 467 aa6.78□□□□□ -1.32
CDCA3-209ENST00000544610 ARHGAP9Q9BRR9 750 aa6.78□□□□□ -1.32
CDCA3-209ENST00000544610 GTPBP2Q9BX10 602 aaKnown RBP6.78□□□□□ -1.32
CDCA3-209ENST00000544610 ULBP1Q9BZM6 244 aa6.78□□□□□ -1.32
CDCA3-209ENST00000544610 METTL5Q9NRN9 209 aaKnown RBP6.78□□□□□ -1.32
CDCA3-209ENST00000544610 MARK1Q9P0L2 795 aa6.78□□□□□ -1.32
CDCA3-209ENST00000544610 GMIPQ9P107 970 aa6.78□□□□□ -1.32
CDCA3-209ENST00000544610 CHORDC1Q9UHD1 332 aaPredicted RBP6.78□□□□□ -1.32
CDCA3-209ENST00000544610 FEZ2Q9UHY8 353 aaPredicted RBP6.78□□□□□ -1.32
CDCA3-209ENST00000544610 NBEAQ8NFP9 2946 aa6.77□□□□□ -1.33
CDCA3-209ENST00000544610 THADAQ6YHU6 1953 aa6.77□□□□□ -1.33
CDCA3-209ENST00000544610 YJEFN3A6XGL0 299 aa6.77□□□□□ -1.33
CDCA3-209ENST00000544610 EFCAB8A8MWE9 144 aa6.77□□□□□ -1.33
CDCA3-209ENST00000544610 E7ENQ6 273 aa6.77□□□□□ -1.33
CDCA3-209ENST00000544610 PGRMC1O00264 195 aaKnown RBP6.77□□□□□ -1.33
CDCA3-209ENST00000544610 CAPN9O14815 690 aa6.77□□□□□ -1.33
CDCA3-209ENST00000544610 FANCGO15287 622 aa6.77□□□□□ -1.33
CDCA3-209ENST00000544610 DDX3YO15523 660 aaKnown RBP6.77□□□□□ -1.33
CDCA3-209ENST00000544610 PRPSAP2O60256 369 aa6.77□□□□□ -1.33
CDCA3-209ENST00000544610 TLR5O60602 858 aa6.77□□□□□ -1.33
CDCA3-209ENST00000544610 OPHN1O60890 802 aa6.77□□□□□ -1.33
CDCA3-209ENST00000544610 ZNF217O75362 1048 aa6.77□□□□□ -1.33
CDCA3-209ENST00000544610 GJB3O75712 270 aa6.77□□□□□ -1.33
CDCA3-209ENST00000544610 URI1O94763 535 aaPredicted RBP6.77□□□□□ -1.33
CDCA3-209ENST00000544610 LATS1O95835 1130 aa6.77□□□□□ -1.33
CDCA3-209ENST00000544610 FTCDO95954 541 aa6.77□□□□□ -1.33
CDCA3-209ENST00000544610 CAPNS1P04632 268 aa6.77□□□□□ -1.33
CDCA3-209ENST00000544610 ATP1A1P05023 1023 aaKnown RBP6.77□□□□□ -1.33
CDCA3-209ENST00000544610 FYNP06241 537 aa6.77□□□□□ -1.33
CDCA3-209ENST00000544610 LCP1P13796 627 aa6.77□□□□□ -1.33
CDCA3-209ENST00000544610 CD59P13987 128 aa6.77□□□□□ -1.33
CDCA3-209ENST00000544610 ZFXP17010 805 aaPredicted RBP6.77□□□□□ -1.33
CDCA3-209ENST00000544610 CXCR3P49682 368 aa6.77□□□□□ -1.33
CDCA3-209ENST00000544610 PGFP49763 221 aa6.77□□□□□ -1.33
CDCA3-209ENST00000544610 RGS7P49802 495 aa6.77□□□□□ -1.33
CDCA3-209ENST00000544610 YWHAGP61981 247 aaKnown RBP eCLIP6.77□□□□□ -1.33
CDCA3-209ENST00000544610 FAM193AP78312 1265 aa6.77□□□□□ -1.33
CDCA3-209ENST00000544610 SLC14A1Q13336 389 aa6.77□□□□□ -1.33
CDCA3-209ENST00000544610 HNRNPDQ14103 355 aaKnown RBP6.77□□□□□ -1.33
CDCA3-209ENST00000544610 DPYSL2Q16555 572 aa6.77□□□□□ -1.33
CDCA3-209ENST00000544610 ZNF423Q2M1K9 1284 aa6.77□□□□□ -1.33
CDCA3-209ENST00000544610 ARL13BQ3SXY8 428 aa6.77□□□□□ -1.33
CDCA3-209ENST00000544610 GLE1Q53GS7 698 aaKnown RBP6.77□□□□□ -1.33
CDCA3-209ENST00000544610 TFDP3Q5H9I0 405 aa6.77□□□□□ -1.33
CDCA3-209ENST00000544610 ERMARDQ5T6L9 678 aa6.77□□□□□ -1.33
CDCA3-209ENST00000544610 GRAMD4Q6IC98 578 aa6.77□□□□□ -1.33
CDCA3-209ENST00000544610 DRICH1Q6PGQ1 229 aaPredicted RBP6.77□□□□□ -1.33
CDCA3-209ENST00000544610 HTR3DQ70Z44 454 aa6.77□□□□□ -1.33
CDCA3-209ENST00000544610 RAB44Q7Z6P3 723 aaPredicted RBP6.77□□□□□ -1.33
CDCA3-209ENST00000544610 CREG2Q8IUH2 290 aa6.77□□□□□ -1.33
CDCA3-209ENST00000544610 DEFB119Q8N690 84 aa6.77□□□□□ -1.33
CDCA3-209ENST00000544610 EIF1ADQ8N9N8 165 aaKnown RBP6.77□□□□□ -1.33
CDCA3-209ENST00000544610 JOSD2Q8TAC2 188 aa6.77□□□□□ -1.33
CDCA3-209ENST00000544610 RNF139Q8WU17 664 aa6.77□□□□□ -1.33
CDCA3-209ENST00000544610 FAM149B1Q96BN6 582 aa6.77□□□□□ -1.33
CDCA3-209ENST00000544610 C1orf74Q96LT6 269 aa6.77□□□□□ -1.33
CDCA3-209ENST00000544610 HSPA12BQ96MM6 686 aa6.77□□□□□ -1.33
CDCA3-209ENST00000544610 HAPLN3Q96S86 360 aa6.77□□□□□ -1.33
CDCA3-209ENST00000544610 ACOX2Q99424 681 aa6.77□□□□□ -1.33
CDCA3-209ENST00000544610 OCSTAMPQ9BR26 566 aa6.77□□□□□ -1.33
CDCA3-209ENST00000544610 ZNF670Q9BS34 389 aa6.77□□□□□ -1.33
CDCA3-209ENST00000544610 NACA2Q9H009 215 aa6.77□□□□□ -1.33
CDCA3-209ENST00000544610 OSBPL2Q9H1P3 480 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms