RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 GREM1O60565 184 aa20.2■□□□□ 0.82
COPS7A-218ENST00000543939 ALDH1A2O94788 518 aa20.2■□□□□ 0.82
COPS7A-218ENST00000543939 ARHGEF15O94989 841 aa20.2■□□□□ 0.82
COPS7A-218ENST00000543939 CLCN4P51793 760 aa20.2■□□□□ 0.82
COPS7A-218ENST00000543939 GEMP55040 296 aa20.2■□□□□ 0.82
COPS7A-218ENST00000543939 CYP4F8P98187 520 aa20.2■□□□□ 0.82
COPS7A-218ENST00000543939 SLC10A7Q0GE19 358 aa20.2■□□□□ 0.82
COPS7A-218ENST00000543939 TRMT10BQ6PF06 316 aaKnown RBP20.2■□□□□ 0.82
COPS7A-218ENST00000543939 CHST9Q7L1S5 443 aa20.2■□□□□ 0.82
COPS7A-218ENST00000543939 SPRED2Q7Z698 418 aa20.2■□□□□ 0.82
COPS7A-218ENST00000543939 LINC00523Q86TU6 105 aa20.2■□□□□ 0.82
COPS7A-218ENST00000543939 MRPS31Q92665 395 aaKnown RBP20.2■□□□□ 0.82
COPS7A-218ENST00000543939 HTATIP2Q9BUP3 242 aa20.2■□□□□ 0.82
COPS7A-218ENST00000543939 MAGEH1Q9H213 219 aa20.2■□□□□ 0.82
COPS7A-218ENST00000543939 SMYD2Q9NRG4 433 aa20.2■□□□□ 0.82
COPS7A-218ENST00000543939 BFARQ9NZS9 450 aa20.2■□□□□ 0.82
COPS7A-218ENST00000543939 SENP1Q9P0U3 644 aa20.2■□□□□ 0.82
COPS7A-218ENST00000543939 GBF1Q92538 1859 aa20.2■□□□□ 0.82
COPS7A-218ENST00000543939 FAM159BA6NKW6 160 aa20.19■□□□□ 0.82
COPS7A-218ENST00000543939 CXorf49A8MYA2 514 aaPredicted RBP20.19■□□□□ 0.82
COPS7A-218ENST00000543939 AP3B1O00203 1094 aa20.19■□□□□ 0.82
COPS7A-218ENST00000543939 PRAMEF11O60813 436 aa20.19■□□□□ 0.82
COPS7A-218ENST00000543939 CLDN11O75508 207 aa20.19■□□□□ 0.82
COPS7A-218ENST00000543939 NEBLO76041 1014 aa20.19■□□□□ 0.82
COPS7A-218ENST00000543939 CSPG5O95196 566 aa20.19■□□□□ 0.82
COPS7A-218ENST00000543939 MT-CYBP00156 380 aaPredicted RBP20.19■□□□□ 0.82
COPS7A-218ENST00000543939 BRAFP15056 766 aa20.19■□□□□ 0.82
COPS7A-218ENST00000543939 KRT15P19012 456 aa20.19■□□□□ 0.82
COPS7A-218ENST00000543939 NPY2RP49146 381 aa20.19■□□□□ 0.82
COPS7A-218ENST00000543939 SGSHP51688 502 aa20.19■□□□□ 0.82
COPS7A-218ENST00000543939 ZXDBP98169 803 aa20.19■□□□□ 0.82
COPS7A-218ENST00000543939 MARC1Q5VT66 337 aa20.19■□□□□ 0.82
COPS7A-218ENST00000543939 ZNF354CQ86Y25 554 aa20.19■□□□□ 0.82
COPS7A-218ENST00000543939 ELMOD1Q8N336 334 aa20.19■□□□□ 0.82
COPS7A-218ENST00000543939 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.19■□□□□ 0.82
COPS7A-218ENST00000543939 DNAAF3Q8N9W5 541 aa20.19■□□□□ 0.82
COPS7A-218ENST00000543939 MZB1Q8WU39 189 aa20.19■□□□□ 0.82
COPS7A-218ENST00000543939 SLC25A51Q9H1U9 297 aa20.19■□□□□ 0.82
COPS7A-218ENST00000543939 CPQQ9Y646 472 aa20.19■□□□□ 0.82
COPS7A-218ENST00000543939 DOCK6Q96HP0 2047 aa20.19■□□□□ 0.82
COPS7A-218ENST00000543939 TMEM120BA0PK00 339 aa20.19■□□□□ 0.82
COPS7A-218ENST00000543939 GNA12Q03113 381 aa20.19■□□□□ 0.82
COPS7A-218ENST00000543939 Q6ZNB5 142 aa20.19■□□□□ 0.82
COPS7A-218ENST00000543939 LRRC6Q86X45 466 aa20.19■□□□□ 0.82
COPS7A-218ENST00000543939 OR52K2Q8NGK3 314 aa20.19■□□□□ 0.82
COPS7A-218ENST00000543939 SLC22A17Q8WUG5 538 aa20.19■□□□□ 0.82
COPS7A-218ENST00000543939 NSMCE1Q8WV22 266 aa20.19■□□□□ 0.82
COPS7A-218ENST00000543939 PABPC5Q96DU9 382 aaKnown RBP20.19■□□□□ 0.82
COPS7A-218ENST00000543939 APOL2Q9BQE5 337 aa20.19■□□□□ 0.82
COPS7A-218ENST00000543939 MIA3Q5JRA6 1907 aa20.18■□□□□ 0.82
COPS7A-218ENST00000543939 A0A1B0GVM2 712 aa20.18■□□□□ 0.82
COPS7A-218ENST00000543939 TCAF2A6NFQ2 919 aa20.18■□□□□ 0.82
COPS7A-218ENST00000543939 SRRM3A6NNA2 597 aaPredicted RBP20.18■□□□□ 0.82
COPS7A-218ENST00000543939 NRG2O14511 850 aaPredicted RBP20.18■□□□□ 0.82
COPS7A-218ENST00000543939 RB1P06400 928 aa20.18■□□□□ 0.82
COPS7A-218ENST00000543939 INHBAP08476 426 aa20.18■□□□□ 0.82
COPS7A-218ENST00000543939 MYOGP15173 224 aa20.18■□□□□ 0.82
COPS7A-218ENST00000543939 CDC25CP30307 473 aa20.18■□□□□ 0.82
COPS7A-218ENST00000543939 ADRA1AP35348 466 aa20.18■□□□□ 0.82
COPS7A-218ENST00000543939 SLC7A9P82251 487 aa20.18■□□□□ 0.82
COPS7A-218ENST00000543939 CDH17Q12864 832 aa20.18■□□□□ 0.82
COPS7A-218ENST00000543939 CAMK1Q14012 370 aa20.18■□□□□ 0.82
COPS7A-218ENST00000543939 CRYMQ14894 314 aa20.18■□□□□ 0.82
COPS7A-218ENST00000543939 PPM1LQ5SGD2 360 aa20.18■□□□□ 0.82
COPS7A-218ENST00000543939 RTL10Q7L3V2 364 aa20.18■□□□□ 0.82
COPS7A-218ENST00000543939 SLC26A11Q86WA9 606 aa20.18■□□□□ 0.82
COPS7A-218ENST00000543939 PPM1NQ8N819 430 aa20.18■□□□□ 0.82
COPS7A-218ENST00000543939 ATXN2LQ8WWM7 1075 aaKnown RBP20.18■□□□□ 0.82
COPS7A-218ENST00000543939 TTC17Q96AE7 1141 aa20.18■□□□□ 0.82
COPS7A-218ENST00000543939 TBL1YQ9BQ87 522 aa20.18■□□□□ 0.82
COPS7A-218ENST00000543939 TRABDQ9H4I3 376 aa20.18■□□□□ 0.82
COPS7A-218ENST00000543939 PDFQ9HBH1 243 aa20.18■□□□□ 0.82
COPS7A-218ENST00000543939 NT5MQ9NPB1 228 aa20.18■□□□□ 0.82
COPS7A-218ENST00000543939 SAMD15Q9P1V8 674 aa20.18■□□□□ 0.82
COPS7A-218ENST00000543939 ZNF180Q9UJW8 692 aa20.18■□□□□ 0.82
COPS7A-218ENST00000543939 IKBKGQ9Y6K9 419 aa20.18■□□□□ 0.82
COPS7A-218ENST00000543939 HELZP42694 1942 aaKnown RBP20.17■□□□□ 0.82
COPS7A-218ENST00000543939 A0A0D9SEW6 157 aa20.17■□□□□ 0.82
COPS7A-218ENST00000543939 A0A1W2PPM1 405 aa20.17■□□□□ 0.82
COPS7A-218ENST00000543939 GFRA2O00451 464 aa20.17■□□□□ 0.82
COPS7A-218ENST00000543939 CCL16O15467 120 aa20.17■□□□□ 0.82
COPS7A-218ENST00000543939 TSPAN3O60637 253 aa20.17■□□□□ 0.82
COPS7A-218ENST00000543939 HOXD9P28356 352 aaPredicted RBP20.17■□□□□ 0.82
COPS7A-218ENST00000543939 MPP2Q14168 576 aa20.17■□□□□ 0.82
COPS7A-218ENST00000543939 CERCAMQ5T4B2 595 aa20.17■□□□□ 0.82
COPS7A-218ENST00000543939 TTC39BQ5VTQ0 682 aaPredicted RBP20.17■□□□□ 0.82
COPS7A-218ENST00000543939 CTAGE3PQ8IX95 158 aa20.17■□□□□ 0.82
COPS7A-218ENST00000543939 MAB21L3Q8N8X9 362 aa20.17■□□□□ 0.82
COPS7A-218ENST00000543939 IPMKQ8NFU5 416 aa20.17■□□□□ 0.82
COPS7A-218ENST00000543939 IMP4Q96G21 291 aaKnown RBP20.17■□□□□ 0.82
COPS7A-218ENST00000543939 ZNF599Q96NL3 588 aa20.17■□□□□ 0.82
COPS7A-218ENST00000543939 CORO1BQ9BR76 489 aa20.17■□□□□ 0.82
COPS7A-218ENST00000543939 ATXN3LQ9H3M9 355 aa20.17■□□□□ 0.82
COPS7A-218ENST00000543939 KCNK9Q9NPC2 374 aa20.17■□□□□ 0.82
COPS7A-218ENST00000543939 INTS9Q9NV88 658 aaKnown RBP20.17■□□□□ 0.82
COPS7A-218ENST00000543939 TBC1D30Q9Y2I9 924 aa20.17■□□□□ 0.82
COPS7A-218ENST00000543939 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.16■□□□□ 0.82
COPS7A-218ENST00000543939 ILVBLA1L0T0 632 aa20.16■□□□□ 0.82
COPS7A-218ENST00000543939 GRM6O15303 877 aa20.16■□□□□ 0.82
COPS7A-218ENST00000543939 C1RP00736 705 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms