RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 K7ERQ8 282 aa17.47■□□□□ 0.39
RABGGTA-203ENST00000543002 DFFAO00273 331 aa17.47■□□□□ 0.39
RABGGTA-203ENST00000543002 ZSCAN12O43309 604 aa17.47■□□□□ 0.39
RABGGTA-203ENST00000543002 ALDH1A2O94788 518 aa17.47■□□□□ 0.39
RABGGTA-203ENST00000543002 CD160O95971 181 aa17.47■□□□□ 0.39
RABGGTA-203ENST00000543002 CDKN2BP42772 138 aa17.47■□□□□ 0.39
RABGGTA-203ENST00000543002 SERPINH1P50454 418 aaKnown RBP17.47■□□□□ 0.39
RABGGTA-203ENST00000543002 DLG2Q15700 870 aa17.47■□□□□ 0.39
RABGGTA-203ENST00000543002 ACCSLQ4AC99 568 aa17.47■□□□□ 0.39
RABGGTA-203ENST00000543002 SLC9A4Q6AI14 798 aa17.47■□□□□ 0.39
RABGGTA-203ENST00000543002 SPOCD1Q6ZMY3 1216 aa17.47■□□□□ 0.39
RABGGTA-203ENST00000543002 RASSF3Q86WH2 238 aa17.47■□□□□ 0.39
RABGGTA-203ENST00000543002 TP53INP2Q8IXH6 220 aa17.47■□□□□ 0.39
RABGGTA-203ENST00000543002 NETO2Q8NC67 525 aa17.47■□□□□ 0.39
RABGGTA-203ENST00000543002 NELL1Q92832 810 aa17.47■□□□□ 0.39
RABGGTA-203ENST00000543002 PTPRN2Q92932 1015 aa17.47■□□□□ 0.39
RABGGTA-203ENST00000543002 ALS2CR12Q96Q35 445 aa17.47■□□□□ 0.39
RABGGTA-203ENST00000543002 FAM126AQ9BYI3 521 aaPredicted RBP17.47■□□□□ 0.39
RABGGTA-203ENST00000543002 MTG2Q9H4K7 406 aa17.47■□□□□ 0.39
RABGGTA-203ENST00000543002 EBF1Q9UH73 591 aa17.47■□□□□ 0.39
RABGGTA-203ENST00000543002 CKAP5Q14008 2032 aa17.46■□□□□ 0.39
RABGGTA-203ENST00000543002 CCDC163A0A0D9SF12 145 aa17.46■□□□□ 0.38
RABGGTA-203ENST00000543002 ZBTB24O43167 697 aaPredicted RBP17.46■□□□□ 0.38
RABGGTA-203ENST00000543002 SMAD6O43541 496 aaKnown RBP17.46■□□□□ 0.38
RABGGTA-203ENST00000543002 MFSD11O43934 449 aa17.46■□□□□ 0.38
RABGGTA-203ENST00000543002 PRAMEF11O60813 436 aa17.46■□□□□ 0.38
RABGGTA-203ENST00000543002 ZFXP17010 805 aaPredicted RBP17.46■□□□□ 0.38
RABGGTA-203ENST00000543002 GABRG2P18507 467 aa17.46■□□□□ 0.38
RABGGTA-203ENST00000543002 NRLP54845 237 aa17.46■□□□□ 0.38
RABGGTA-203ENST00000543002 RWDD2BP57060 319 aa17.46■□□□□ 0.38
RABGGTA-203ENST00000543002 DMWDQ09019 674 aa17.46■□□□□ 0.38
RABGGTA-203ENST00000543002 TCF15Q12870 199 aa17.46■□□□□ 0.38
RABGGTA-203ENST00000543002 TFDP3Q5H9I0 405 aa17.46■□□□□ 0.38
RABGGTA-203ENST00000543002 C9orf64Q5T6V5 341 aa17.46■□□□□ 0.38
RABGGTA-203ENST00000543002 ANO7Q6IWH7 933 aa17.46■□□□□ 0.38
RABGGTA-203ENST00000543002 METTL3Q86U44 580 aaKnown RBP17.46■□□□□ 0.38
RABGGTA-203ENST00000543002 RFX6Q8HWS3 928 aa17.46■□□□□ 0.38
RABGGTA-203ENST00000543002 REXO1L1PQ8IX06 675 aa17.46■□□□□ 0.38
RABGGTA-203ENST00000543002 UBL4BQ8N7F7 174 aa17.46■□□□□ 0.38
RABGGTA-203ENST00000543002 OR2T3Q8NH03 318 aa17.46■□□□□ 0.38
RABGGTA-203ENST00000543002 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.46■□□□□ 0.38
RABGGTA-203ENST00000543002 CASKIN2Q8WXE0 1202 aa17.46■□□□□ 0.38
RABGGTA-203ENST00000543002 ALG3Q92685 438 aa17.46■□□□□ 0.38
RABGGTA-203ENST00000543002 ERLEC1Q96DZ1 483 aa17.46■□□□□ 0.38
RABGGTA-203ENST00000543002 CEP44Q9C0F1 390 aa17.46■□□□□ 0.38
RABGGTA-203ENST00000543002 FBRSQ9HAH7 460 aa17.46■□□□□ 0.38
RABGGTA-203ENST00000543002 PDFQ9HBH1 243 aa17.46■□□□□ 0.38
RABGGTA-203ENST00000543002 PACSIN2Q9UNF0 486 aaPredicted RBP17.46■□□□□ 0.38
RABGGTA-203ENST00000543002 ACTL7AQ9Y615 435 aa17.46■□□□□ 0.38
RABGGTA-203ENST00000543002 hCG_1818297A0A087WSY0 165 aa17.45■□□□□ 0.38
RABGGTA-203ENST00000543002 J3KR12 359 aa17.45■□□□□ 0.38
RABGGTA-203ENST00000543002 APOL1O14791 398 aa17.45■□□□□ 0.38
RABGGTA-203ENST00000543002 DDX3YO15523 660 aaKnown RBP17.45■□□□□ 0.38
RABGGTA-203ENST00000543002 SIN3BO75182 1162 aa17.45■□□□□ 0.38
RABGGTA-203ENST00000543002 VAV1P15498 845 aa17.45■□□□□ 0.38
RABGGTA-203ENST00000543002 PXNP49023 591 aaPredicted RBP17.45■□□□□ 0.38
RABGGTA-203ENST00000543002 FNTBP49356 437 aa17.45■□□□□ 0.38
RABGGTA-203ENST00000543002 COPAP53621 1224 aa17.45■□□□□ 0.38
RABGGTA-203ENST00000543002 COPS2P61201 443 aa17.45■□□□□ 0.38
RABGGTA-203ENST00000543002 PPP2R5EQ16537 467 aa17.45■□□□□ 0.38
RABGGTA-203ENST00000543002 INO80DQ53TQ3 878 aaPredicted RBP17.45■□□□□ 0.38
RABGGTA-203ENST00000543002 C22orf39Q6P5X5 142 aa17.45■□□□□ 0.38
RABGGTA-203ENST00000543002 LEKR1Q6ZMV7 388 aa17.45■□□□□ 0.38
RABGGTA-203ENST00000543002 WDR5BQ86VZ2 330 aa17.45■□□□□ 0.38
RABGGTA-203ENST00000543002 LRRC49Q8IUZ0 686 aa17.45■□□□□ 0.38
RABGGTA-203ENST00000543002 CCDC50Q8IVM0 306 aa17.45■□□□□ 0.38
RABGGTA-203ENST00000543002 PLD5Q8N7P1 536 aa17.45■□□□□ 0.38
RABGGTA-203ENST00000543002 MDGA1Q8NFP4 955 aa17.45■□□□□ 0.38
RABGGTA-203ENST00000543002 TRIM58Q8NG06 486 aa17.45■□□□□ 0.38
RABGGTA-203ENST00000543002 HMGB4Q8WW32 186 aa17.45■□□□□ 0.38
RABGGTA-203ENST00000543002 ISG20Q96AZ6 181 aaKnown RBP17.45■□□□□ 0.38
RABGGTA-203ENST00000543002 HES6Q96HZ4 224 aa17.45■□□□□ 0.38
RABGGTA-203ENST00000543002 MKRN2Q9H000 416 aaKnown RBP17.45■□□□□ 0.38
RABGGTA-203ENST00000543002 BCCIPQ9P287 314 aaKnown RBP eCLIP17.45■□□□□ 0.38
RABGGTA-203ENST00000543002 IPO11Q9UI26 975 aaKnown RBP17.45■□□□□ 0.38
RABGGTA-203ENST00000543002 HCN4Q9Y3Q4 1203 aa17.45■□□□□ 0.38
RABGGTA-203ENST00000543002 H0Y858 1186 aa17.44■□□□□ 0.38
RABGGTA-203ENST00000543002 AXIN1O15169 862 aa17.44■□□□□ 0.38
RABGGTA-203ENST00000543002 C7P10643 843 aa17.44■□□□□ 0.38
RABGGTA-203ENST00000543002 KRT10P13645 584 aa17.44■□□□□ 0.38
RABGGTA-203ENST00000543002 NDUFV2P19404 249 aa17.44■□□□□ 0.38
RABGGTA-203ENST00000543002 GBE1Q04446 702 aa17.44■□□□□ 0.38
RABGGTA-203ENST00000543002 IL10RBQ08334 325 aa17.44■□□□□ 0.38
RABGGTA-203ENST00000543002 GALNT2Q10471 571 aa17.44■□□□□ 0.38
RABGGTA-203ENST00000543002 TFDP2Q14188 446 aa17.44■□□□□ 0.38
RABGGTA-203ENST00000543002 HEATR6Q6AI08 1181 aaKnown RBP17.44■□□□□ 0.38
RABGGTA-203ENST00000543002 ARHGAP36Q6ZRI8 547 aa17.44■□□□□ 0.38
RABGGTA-203ENST00000543002 Q6ZVU0 165 aa17.44■□□□□ 0.38
RABGGTA-203ENST00000543002 LONP2Q86WA8 852 aa17.44■□□□□ 0.38
RABGGTA-203ENST00000543002 TMPRSS6Q8IU80 811 aa17.44■□□□□ 0.38
RABGGTA-203ENST00000543002 PGBD3Q8N328 593 aa17.44■□□□□ 0.38
RABGGTA-203ENST00000543002 PCDH20Q8N6Y1 951 aaKnown RBP17.44■□□□□ 0.38
RABGGTA-203ENST00000543002 MRGPRX1Q96LB2 322 aa17.44■□□□□ 0.38
RABGGTA-203ENST00000543002 IRF2BPLQ9H1B7 796 aa17.44■□□□□ 0.38
RABGGTA-203ENST00000543002 SP110Q9HB58 689 aa17.44■□□□□ 0.38
RABGGTA-203ENST00000543002 ZSCAN32Q9NX65 697 aa17.44■□□□□ 0.38
RABGGTA-203ENST00000543002 UBA2Q9UBT2 640 aaPredicted RBP17.44■□□□□ 0.38
RABGGTA-203ENST00000543002 PYCARDQ9ULZ3 195 aa17.44■□□□□ 0.38
RABGGTA-203ENST00000543002 FCF1Q9Y324 198 aaKnown RBP17.44■□□□□ 0.38
RABGGTA-203ENST00000543002 MAFKO60675 156 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms