RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 CATSPERZQ9NTU4 200 aa13.3□□□□□ -0.28
TNC-212ENST00000542877 UBA2Q9UBT2 640 aaPredicted RBP13.3□□□□□ -0.28
TNC-212ENST00000542877 ZMYM5Q9UJ78 669 aa13.3□□□□□ -0.28
TNC-212ENST00000542877 ZNF112Q9UJU3 913 aa13.3□□□□□ -0.28
TNC-212ENST00000542877 ITGB1BP2Q9UKP3 347 aa13.3□□□□□ -0.28
TNC-212ENST00000542877 EFCAB10A6NFE3 127 aa13.3□□□□□ -0.28
TNC-212ENST00000542877 RTN3O95197 1032 aaPredicted RBP13.3□□□□□ -0.28
TNC-212ENST00000542877 TRUB2O95900 331 aaKnown RBP13.3□□□□□ -0.28
TNC-212ENST00000542877 CNPP09543 421 aaKnown RBP13.3□□□□□ -0.28
TNC-212ENST00000542877 AKAP5P24588 427 aa13.3□□□□□ -0.28
TNC-212ENST00000542877 PSMB4P28070 264 aa13.3□□□□□ -0.28
TNC-212ENST00000542877 FMO4P31512 558 aa13.3□□□□□ -0.28
TNC-212ENST00000542877 GUCA1AP43080 201 aaPredicted RBP13.3□□□□□ -0.28
TNC-212ENST00000542877 ZNF57Q68EA5 555 aaPredicted RBP13.3□□□□□ -0.28
TNC-212ENST00000542877 CDC73Q6P1J9 531 aa13.3□□□□□ -0.28
TNC-212ENST00000542877 POLNQ7Z5Q5 900 aa13.3□□□□□ -0.28
TNC-212ENST00000542877 TMEM86AQ8N2M4 240 aa13.3□□□□□ -0.28
TNC-212ENST00000542877 SHC3Q92529 594 aa13.3□□□□□ -0.28
TNC-212ENST00000542877 TEKT5Q96M29 485 aa13.3□□□□□ -0.28
TNC-212ENST00000542877 EPB41L4BQ9H329 900 aa13.3□□□□□ -0.28
TNC-212ENST00000542877 SPAG4Q9NPE6 437 aa13.3□□□□□ -0.28
TNC-212ENST00000542877 MORF4L1Q9UBU8 362 aa13.3□□□□□ -0.28
TNC-212ENST00000542877 ATXN2Q99700 1313 aaKnown RBP13.3□□□□□ -0.28
TNC-212ENST00000542877 COL3A1P02461 1466 aaPredicted RBP13.3□□□□□ -0.28
TNC-212ENST00000542877 MEGF6O75095 1541 aa13.3□□□□□ -0.28
TNC-212ENST00000542877 KRT36O76013 467 aa13.3□□□□□ -0.28
TNC-212ENST00000542877 WFS1O76024 890 aa13.3□□□□□ -0.28
TNC-212ENST00000542877 MFN2O95140 757 aa13.3□□□□□ -0.28
TNC-212ENST00000542877 EPN2O95208 641 aa13.3□□□□□ -0.28
TNC-212ENST00000542877 BMP10O95393 424 aa13.3□□□□□ -0.28
TNC-212ENST00000542877 ALDH2P05091 517 aa13.3□□□□□ -0.28
TNC-212ENST00000542877 TAF5Q15542 800 aa13.3□□□□□ -0.28
TNC-212ENST00000542877 BROXQ5VW32 411 aa13.3□□□□□ -0.28
TNC-212ENST00000542877 NKAPQ8N5F7 415 aaKnown RBP13.3□□□□□ -0.28
TNC-212ENST00000542877 OR52K1Q8NGK4 314 aa13.3□□□□□ -0.28
TNC-212ENST00000542877 ADAM32Q8TC27 787 aa13.3□□□□□ -0.28
TNC-212ENST00000542877 RNF157Q96PX1 679 aa13.3□□□□□ -0.28
TNC-212ENST00000542877 CDH9Q9ULB4 789 aa13.3□□□□□ -0.28
TNC-212ENST00000542877 H3BMM5 538 aa13.3□□□□□ -0.28
TNC-212ENST00000542877 ENTPD5O75356 428 aa13.3□□□□□ -0.28
TNC-212ENST00000542877 YWHAQP27348 245 aa13.3□□□□□ -0.28
TNC-212ENST00000542877 CHKAP35790 457 aa13.3□□□□□ -0.28
TNC-212ENST00000542877 KCTD21Q4G0X4 260 aa13.3□□□□□ -0.28
TNC-212ENST00000542877 ZNF618Q5T7W0 954 aa13.3□□□□□ -0.28
TNC-212ENST00000542877 ZNF621Q6ZSS3 439 aa13.3□□□□□ -0.28
TNC-212ENST00000542877 BBS12Q6ZW61 710 aa13.3□□□□□ -0.28
TNC-212ENST00000542877 GLIS3Q8NEA6 775 aa13.3□□□□□ -0.28
TNC-212ENST00000542877 WDR48Q8TAF3 677 aa13.3□□□□□ -0.28
TNC-212ENST00000542877 RDH11Q8TC12 318 aa13.3□□□□□ -0.28
TNC-212ENST00000542877 MAGEE2Q8TD90 523 aaPredicted RBP13.3□□□□□ -0.28
TNC-212ENST00000542877 SAE1Q9UBE0 346 aaPredicted RBP13.3□□□□□ -0.28
TNC-212ENST00000542877 SPATA2Q9UM82 520 aa13.3□□□□□ -0.28
TNC-212ENST00000542877 SF3B1O75533 1304 aaKnown RBP eCLIP13.29□□□□□ -0.28
TNC-212ENST00000542877 PSMD10O75832 226 aa13.29□□□□□ -0.28
TNC-212ENST00000542877 FYNP06241 537 aa13.29□□□□□ -0.28
TNC-212ENST00000542877 HOXC6P09630 235 aa13.29□□□□□ -0.28
TNC-212ENST00000542877 TSPAN19P0C672 248 aa13.29□□□□□ -0.28
TNC-212ENST00000542877 FMO1Q01740 532 aa13.29□□□□□ -0.28
TNC-212ENST00000542877 UNC5AQ6ZN44 842 aa13.29□□□□□ -0.28
TNC-212ENST00000542877 TTC7BQ86TV6 843 aa13.29□□□□□ -0.28
TNC-212ENST00000542877 LENG9Q96B70 501 aa13.29□□□□□ -0.28
TNC-212ENST00000542877 INPP4AQ96PE3 977 aaPredicted RBP13.29□□□□□ -0.28
TNC-212ENST00000542877 DGCR6LQ9BY27 220 aa13.29□□□□□ -0.28
TNC-212ENST00000542877 FAM126AQ9BYI3 521 aaPredicted RBP13.29□□□□□ -0.28
TNC-212ENST00000542877 TECPR2O15040 1411 aa13.29□□□□□ -0.28
TNC-212ENST00000542877 NFASCO94856 1347 aa13.29□□□□□ -0.28
TNC-212ENST00000542877 TISP43B9A030 160 aa13.29□□□□□ -0.28
TNC-212ENST00000542877 CCDC130P13994 396 aa13.29□□□□□ -0.28
TNC-212ENST00000542877 PTPN3P26045 913 aa13.29□□□□□ -0.28
TNC-212ENST00000542877 GRIA3P42263 894 aa13.29□□□□□ -0.28
TNC-212ENST00000542877 CLCN5P51795 746 aa13.29□□□□□ -0.28
TNC-212ENST00000542877 XIAPP98170 497 aa13.29□□□□□ -0.28
TNC-212ENST00000542877 FGD3Q5JSP0 725 aa13.29□□□□□ -0.28
TNC-212ENST00000542877 C11orf88Q6PI97 169 aa13.29□□□□□ -0.28
TNC-212ENST00000542877 ABRAXAS1Q6UWZ7 409 aa13.29□□□□□ -0.28
TNC-212ENST00000542877 HAS1Q92839 578 aa13.29□□□□□ -0.28
TNC-212ENST00000542877 LEF1Q9UJU2 399 aaPredicted RBP13.29□□□□□ -0.28
TNC-212ENST00000542877 MAPRE3Q9UPY8 281 aa13.29□□□□□ -0.28
TNC-212ENST00000542877 RAP2CQ9Y3L5 183 aa13.29□□□□□ -0.28
TNC-212ENST00000542877 CLUHO75153 1309 aa13.29□□□□□ -0.28
TNC-212ENST00000542877 TRIM43BA6NCK2 446 aa13.29□□□□□ -0.28
TNC-212ENST00000542877 SNAP91O60641 907 aa13.29□□□□□ -0.28
TNC-212ENST00000542877 FGFR3P22607 806 aa13.29□□□□□ -0.28
TNC-212ENST00000542877 DGKAP23743 735 aa13.29□□□□□ -0.28
TNC-212ENST00000542877 NUMBP49757 651 aa13.29□□□□□ -0.28
TNC-212ENST00000542877 NPNTQ6UXI9 565 aa13.29□□□□□ -0.28
TNC-212ENST00000542877 VN1R5Q7Z5H4 357 aa13.29□□□□□ -0.28
TNC-212ENST00000542877 SYT12Q8IV01 421 aa13.29□□□□□ -0.28
TNC-212ENST00000542877 PROX1Q92786 737 aa13.29□□□□□ -0.28
TNC-212ENST00000542877 PHACTR1Q9C0D0 580 aa13.29□□□□□ -0.28
TNC-212ENST00000542877 NUAK2Q9H093 628 aa13.29□□□□□ -0.28
TNC-212ENST00000542877 SEMA4BQ9NPR2 832 aaPredicted RBP13.29□□□□□ -0.28
TNC-212ENST00000542877 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.29□□□□□ -0.28
TNC-212ENST00000542877 ADRB2P07550 413 aa13.29□□□□□ -0.28
TNC-212ENST00000542877 ACSM2AQ08AH3 577 aa13.29□□□□□ -0.28
TNC-212ENST00000542877 NBPF12Q5TAG4 269 aaPredicted RBP13.29□□□□□ -0.28
TNC-212ENST00000542877 ACSM2BQ68CK6 577 aa13.29□□□□□ -0.28
TNC-212ENST00000542877 ALG9Q9H6U8 611 aa13.29□□□□□ -0.28
TNC-212ENST00000542877 ABCC13Q9NSE7 274 aa13.29□□□□□ -0.28
TNC-212ENST00000542877 CRYL1Q9Y2S2 319 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms