RNA–Protein interactions for RNA: ENST00000542848.5

PTPN6-219, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 5

Gene PTPN6, Length 656 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-219ENST00000542848 NPY6RQ99463 290 aa12.16□□□□□ -0.46
PTPN6-219ENST00000542848 C2orf49Q9BVC5 232 aaPredicted RBP12.16□□□□□ -0.46
PTPN6-219ENST00000542848 MUC3BQ9H195 1237 aa12.16□□□□□ -0.46
PTPN6-219ENST00000542848 SYNCQ9H7C4 482 aa12.16□□□□□ -0.46
PTPN6-219ENST00000542848 ARHGEF38Q9NXL2 777 aa12.16□□□□□ -0.46
PTPN6-219ENST00000542848 KIAA1468Q9P260 1216 aa12.16□□□□□ -0.46
PTPN6-219ENST00000542848 RP1P56715 2156 aa12.15□□□□□ -0.46
PTPN6-219ENST00000542848 DRGXA6NNA5 263 aa12.15□□□□□ -0.46
PTPN6-219ENST00000542848 FOXN3O00409 490 aaPredicted RBP12.15□□□□□ -0.46
PTPN6-219ENST00000542848 CNTN5O94779 1100 aa12.15□□□□□ -0.46
PTPN6-219ENST00000542848 ADCY5O95622 1261 aa12.15□□□□□ -0.46
PTPN6-219ENST00000542848 MT-CO1P00395 513 aa12.15□□□□□ -0.46
PTPN6-219ENST00000542848 F9P00740 461 aa12.15□□□□□ -0.46
PTPN6-219ENST00000542848 RHOCP08134 193 aa12.15□□□□□ -0.46
PTPN6-219ENST00000542848 CHRNA3P32297 505 aa12.15□□□□□ -0.46
PTPN6-219ENST00000542848 ABCG1P45844 678 aa12.15□□□□□ -0.46
PTPN6-219ENST00000542848 CLCN6P51797 869 aa12.15□□□□□ -0.46
PTPN6-219ENST00000542848 BPIFB4P59827 614 aa12.15□□□□□ -0.46
PTPN6-219ENST00000542848 E2F1Q01094 437 aa12.15□□□□□ -0.46
PTPN6-219ENST00000542848 ZNF211Q13398 564 aaPredicted RBP12.15□□□□□ -0.46
PTPN6-219ENST00000542848 PROX2Q3B8N5 592 aa12.15□□□□□ -0.46
PTPN6-219ENST00000542848 PTPN20Q4JDL3 420 aa12.15□□□□□ -0.46
PTPN6-219ENST00000542848 PIP5KL1Q5T9C9 394 aa12.15□□□□□ -0.46
PTPN6-219ENST00000542848 SLC47A2Q86VL8 602 aa12.15□□□□□ -0.46
PTPN6-219ENST00000542848 ATP11CQ8NB49 1132 aa12.15□□□□□ -0.46
PTPN6-219ENST00000542848 TMEM145Q8NBT3 493 aa12.15□□□□□ -0.46
PTPN6-219ENST00000542848 NT5C3BQ969T7 300 aa12.15□□□□□ -0.46
PTPN6-219ENST00000542848 PSMB7Q99436 277 aa12.15□□□□□ -0.46
PTPN6-219ENST00000542848 TKTL2Q9H0I9 626 aa12.15□□□□□ -0.46
PTPN6-219ENST00000542848 SIX2Q9NPC8 291 aa12.15□□□□□ -0.46
PTPN6-219ENST00000542848 PIGVQ9NUD9 493 aa12.15□□□□□ -0.46
PTPN6-219ENST00000542848 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.15□□□□□ -0.46
PTPN6-219ENST00000542848 DNAJC12Q9UKB3 198 aa12.15□□□□□ -0.46
PTPN6-219ENST00000542848 STAP1Q9ULZ2 295 aa12.15□□□□□ -0.46
PTPN6-219ENST00000542848 PAXBP1Q9Y5B6 917 aa12.15□□□□□ -0.46
PTPN6-219ENST00000542848 AK5Q9Y6K8 562 aa12.15□□□□□ -0.46
PTPN6-219ENST00000542848 LRRK1Q38SD2 2015 aa12.15□□□□□ -0.47
PTPN6-219ENST00000542848 KALRNO60229 2985 aa12.14□□□□□ -0.47
PTPN6-219ENST00000542848 BNIP3LO60238 219 aa12.14□□□□□ -0.47
PTPN6-219ENST00000542848 PRNPP04156 253 aa12.14□□□□□ -0.47
PTPN6-219ENST00000542848 CTSLP07711 333 aa12.14□□□□□ -0.47
PTPN6-219ENST00000542848 SCNN1AP37088 669 aa12.14□□□□□ -0.47
PTPN6-219ENST00000542848 GGCXP38435 758 aa12.14□□□□□ -0.47
PTPN6-219ENST00000542848 EIF2S3P41091 472 aaKnown RBP12.14□□□□□ -0.47
PTPN6-219ENST00000542848 MTIF2P46199 727 aaKnown RBP12.14□□□□□ -0.47
PTPN6-219ENST00000542848 GABRB2P47870 512 aa12.14□□□□□ -0.47
PTPN6-219ENST00000542848 CLDN6P56747 220 aa12.14□□□□□ -0.47
PTPN6-219ENST00000542848 KCNMA1Q12791 1236 aa12.14□□□□□ -0.47
PTPN6-219ENST00000542848 POM121L1PQ3SYA9 428 aa12.14□□□□□ -0.47
PTPN6-219ENST00000542848 ALFQ53S48 1182 aa12.14□□□□□ -0.47
PTPN6-219ENST00000542848 OTUD1Q5VV17 481 aaPredicted RBP12.14□□□□□ -0.47
PTPN6-219ENST00000542848 LRRC31Q6UY01 552 aa12.14□□□□□ -0.47
PTPN6-219ENST00000542848 LRRC69Q6ZNQ3 347 aa12.14□□□□□ -0.47
PTPN6-219ENST00000542848 HORMAD1Q86X24 394 aa12.14□□□□□ -0.47
PTPN6-219ENST00000542848 FAM71AQ8IYT1 594 aa12.14□□□□□ -0.47
PTPN6-219ENST00000542848 ZNF683Q8IZ20 524 aa12.14□□□□□ -0.47
PTPN6-219ENST00000542848 SLC25A45Q8N413 288 aa12.14□□□□□ -0.47
PTPN6-219ENST00000542848 TMEM35BQ8NCS4 154 aa12.14□□□□□ -0.47
PTPN6-219ENST00000542848 OR2A12Q8NGT7 310 aa12.14□□□□□ -0.47
PTPN6-219ENST00000542848 FAM174AQ8TBP5 190 aa12.14□□□□□ -0.47
PTPN6-219ENST00000542848 DCBLD2Q96PD2 775 aa12.14□□□□□ -0.47
PTPN6-219ENST00000542848 BBC3Q96PG8 261 aaPredicted RBP12.14□□□□□ -0.47
PTPN6-219ENST00000542848 ANLNQ9NQW6 1124 aa12.14□□□□□ -0.47
PTPN6-219ENST00000542848 DYRK4Q9NR20 520 aa12.14□□□□□ -0.47
PTPN6-219ENST00000542848 KLHL11Q9NVR0 708 aa12.14□□□□□ -0.47
PTPN6-219ENST00000542848 VPS51Q9UID3 782 aa12.14□□□□□ -0.47
PTPN6-219ENST00000542848 KIF26BQ2KJY2 2108 aa12.14□□□□□ -0.47
PTPN6-219ENST00000542848 HELZ2Q9BYK8 2649 aaKnown RBP12.13□□□□□ -0.47
PTPN6-219ENST00000542848 MGAQ8IWI9 3026 aa12.13□□□□□ -0.47
PTPN6-219ENST00000542848 IGLV3-10A0A075B6K4 115 aa12.13□□□□□ -0.47
PTPN6-219ENST00000542848 A0A1W2PQU0 124 aa12.13□□□□□ -0.47
PTPN6-219ENST00000542848 EIF4E1BA6NMX2 242 aaKnown RBP12.13□□□□□ -0.47
PTPN6-219ENST00000542848 KPNA3O00505 521 aaPredicted RBP12.13□□□□□ -0.47
PTPN6-219ENST00000542848 SLC31A1O15431 190 aa12.13□□□□□ -0.47
PTPN6-219ENST00000542848 RRP8O43159 456 aaKnown RBP12.13□□□□□ -0.47
PTPN6-219ENST00000542848 SMAD6O43541 496 aaKnown RBP12.13□□□□□ -0.47
PTPN6-219ENST00000542848 SIGLEC6O43699 453 aa12.13□□□□□ -0.47
PTPN6-219ENST00000542848 SNAP91O60641 907 aa12.13□□□□□ -0.47
PTPN6-219ENST00000542848 THEGLP0DJG4 465 aa12.13□□□□□ -0.47
PTPN6-219ENST00000542848 PRKCSHP14314 528 aaPredicted RBP12.13□□□□□ -0.47
PTPN6-219ENST00000542848 GLDCP23378 1020 aa12.13□□□□□ -0.47
PTPN6-219ENST00000542848 DGKAP23743 735 aa12.13□□□□□ -0.47
PTPN6-219ENST00000542848 CDH5P33151 784 aaPredicted RBP12.13□□□□□ -0.47
PTPN6-219ENST00000542848 SULT1E1P49888 294 aa12.13□□□□□ -0.47
PTPN6-219ENST00000542848 RNASE9P60153 205 aaKnown RBP12.13□□□□□ -0.47
PTPN6-219ENST00000542848 SEMG2Q02383 582 aa12.13□□□□□ -0.47
PTPN6-219ENST00000542848 DEUP1Q05D60 604 aa12.13□□□□□ -0.47
PTPN6-219ENST00000542848 SLC20A2Q08357 652 aa12.13□□□□□ -0.47
PTPN6-219ENST00000542848 MAN2A1Q16706 1144 aa12.13□□□□□ -0.47
PTPN6-219ENST00000542848 ZNF284Q2VY69 593 aa12.13□□□□□ -0.47
PTPN6-219ENST00000542848 SLC25A52Q3SY17 297 aa12.13□□□□□ -0.47
PTPN6-219ENST00000542848 HS1BP3Q53T59 392 aa12.13□□□□□ -0.47
PTPN6-219ENST00000542848 ZNF783Q6ZMS7 281 aa12.13□□□□□ -0.47
PTPN6-219ENST00000542848 ERN2Q76MJ5 926 aaKnown RBP12.13□□□□□ -0.47
PTPN6-219ENST00000542848 DCP2Q8IU60 420 aaKnown RBP12.13□□□□□ -0.47
PTPN6-219ENST00000542848 DCAF4L2Q8NA75 395 aa12.13□□□□□ -0.47
PTPN6-219ENST00000542848 MLKLQ8NB16 471 aa12.13□□□□□ -0.47
PTPN6-219ENST00000542848 OR4C6Q8NH72 309 aa12.13□□□□□ -0.47
PTPN6-219ENST00000542848 BAP1Q92560 729 aa12.13□□□□□ -0.47
PTPN6-219ENST00000542848 ARRDC3Q96B67 414 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms