RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 SLC4A5Q9BY07 1137 aa8.33□□□□□ -1.08
PRKAB1-207ENST00000542698 RHOJQ9H4E5 214 aa8.33□□□□□ -1.08
PRKAB1-207ENST00000542698 RUBCNLQ9H714 662 aa8.33□□□□□ -1.08
PRKAB1-207ENST00000542698 FBXO5Q9UKT4 447 aa8.33□□□□□ -1.08
PRKAB1-207ENST00000542698 POMPQ9Y244 141 aa8.33□□□□□ -1.08
PRKAB1-207ENST00000542698 CASTOR2A6NHX0 329 aa8.33□□□□□ -1.08
PRKAB1-207ENST00000542698 PEX10O60683 326 aa8.33□□□□□ -1.08
PRKAB1-207ENST00000542698 SNRPB2P08579 225 aaKnown RBP8.33□□□□□ -1.08
PRKAB1-207ENST00000542698 CCDC166P0CW27 439 aa8.33□□□□□ -1.08
PRKAB1-207ENST00000542698 FCGR1AP12314 374 aa8.33□□□□□ -1.08
PRKAB1-207ENST00000542698 GRIA1P42261 906 aa8.33□□□□□ -1.08
PRKAB1-207ENST00000542698 PSEN1P49768 467 aa8.33□□□□□ -1.08
PRKAB1-207ENST00000542698 RAB10P61026 200 aa8.33□□□□□ -1.08
PRKAB1-207ENST00000542698 RAD51Q06609 339 aa8.33□□□□□ -1.08
PRKAB1-207ENST00000542698 CA9Q16790 459 aa8.33□□□□□ -1.08
PRKAB1-207ENST00000542698 ARL13AQ5H913 290 aaPredicted RBP8.33□□□□□ -1.08
PRKAB1-207ENST00000542698 C10orf120Q5SQS8 335 aa8.33□□□□□ -1.08
PRKAB1-207ENST00000542698 CWF19L1Q69YN2 538 aaKnown RBP8.33□□□□□ -1.08
PRKAB1-207ENST00000542698 GLB1LQ6UWU2 654 aa8.33□□□□□ -1.08
PRKAB1-207ENST00000542698 TAS1R3Q7RTX0 852 aa8.33□□□□□ -1.08
PRKAB1-207ENST00000542698 CLVS1Q8IUQ0 354 aaPredicted RBP8.33□□□□□ -1.08
PRKAB1-207ENST00000542698 DSELQ8IZU8 1212 aa8.33□□□□□ -1.08
PRKAB1-207ENST00000542698 GALNT15Q8N3T1 639 aa8.33□□□□□ -1.08
PRKAB1-207ENST00000542698 ENDOVQ8N8Q3 282 aaKnown RBP8.33□□□□□ -1.08
PRKAB1-207ENST00000542698 TSPAN14Q8NG11 270 aa8.33□□□□□ -1.08
PRKAB1-207ENST00000542698 ASIC4Q96FT7 647 aa8.33□□□□□ -1.08
PRKAB1-207ENST00000542698 SMARCD1Q96GM5 515 aa8.33□□□□□ -1.08
PRKAB1-207ENST00000542698 QKIQ96PU8 341 aaKnown RBP eCLIP8.33□□□□□ -1.08
PRKAB1-207ENST00000542698 MID1IP1Q9NPA3 183 aa8.33□□□□□ -1.08
PRKAB1-207ENST00000542698 PDGFCQ9NRA1 345 aa8.33□□□□□ -1.08
PRKAB1-207ENST00000542698 DTLQ9NZJ0 730 aa8.33□□□□□ -1.08
PRKAB1-207ENST00000542698 DNAJB4Q9UDY4 337 aa8.33□□□□□ -1.08
PRKAB1-207ENST00000542698 VPS9D1Q9Y2B5 631 aa8.33□□□□□ -1.08
PRKAB1-207ENST00000542698 FARP1Q9Y4F1 1045 aaPredicted RBP8.33□□□□□ -1.08
PRKAB1-207ENST00000542698 CACNA1SQ13698 1873 aa8.33□□□□□ -1.08
PRKAB1-207ENST00000542698 MYH1P12882 1939 aa8.33□□□□□ -1.08
PRKAB1-207ENST00000542698 MYH4Q9Y623 1939 aa8.33□□□□□ -1.08
PRKAB1-207ENST00000542698 TOGARAM1Q9Y4F4 1720 aa8.33□□□□□ -1.08
PRKAB1-207ENST00000542698 A0A087WXM4 84 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 C15orf38-AP3S2A0A0A6YYH1 394 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 CLDN5O00501 218 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 TRIM38O00635 465 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 STX7O15400 261 aaKnown RBP8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 MFSD11O43934 449 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 HNRNPLP14866 589 aaKnown RBP eCLIP8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 VAV1P15498 845 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 FGFR3P22607 806 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 MPSTP25325 297 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 LRPAP1P30533 357 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 NUMBP49757 651 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 IDH3AP50213 366 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 HK2P52789 917 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 KCNJ11Q14654 390 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 TEX44Q53QW1 395 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 ZRANB3Q5FWF4 1079 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 OTUD3Q5T2D3 398 aaPredicted RBP8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 FSTL4Q6MZW2 842 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 DPY19L2P1Q6NXN4 242 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 RBM44Q6ZP01 1051 aaKnown RBP8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 ARPINQ7Z6K5 226 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 TFAP2DQ7Z6R9 452 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 CAMK1DQ8IU85 385 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 IGDCC3Q8IVU1 814 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 TMEM192Q8IY95 271 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 SPATA6LQ8N4H0 392 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 ADCY4Q8NFM4 1077 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 PARK7Q99497 189 aaKnown RBP8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 DCUN1D5Q9BTE7 237 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 GATA5Q9BWX5 397 aaPredicted RBP8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 ARHGEF4Q9NR80 690 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 CHRAC1Q9NRG0 131 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 ADARB2Q9NS39 739 aaKnown RBP8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 DNAJC28Q9NX36 388 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 HMGXB4Q9UGU5 601 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 AFF4Q9UHB7 1163 aaKnown RBP8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 MRPL42Q9Y6G3 142 aaKnown RBP8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 SHANK3Q9BYB0 1731 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 ATP6AP2A0A1C7CYW4 349 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 NCF1BA6NI72 391 aaPredicted RBP8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 NCF1CA8MVU1 366 aaPredicted RBP8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 M0R3G1 203 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 ATP6AP2O75787 350 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 NCF1P14598 390 aaPredicted RBP8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 PEX2P28328 305 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 GRIA3P42263 894 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 RGS4P49798 205 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 LIMK2P53671 638 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 TWF1Q12792 350 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 DCTN2Q13561 401 aaKnown RBP8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 C16orf72Q14CZ0 275 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 CYP51A1Q16850 503 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 PTRHD1Q6GMV3 140 aaKnown RBP8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 PYROXD2Q8N2H3 581 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 TNIP2Q8NFZ5 429 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 C18orf25Q96B23 403 aaPredicted RBP8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 KCTD15Q96SI1 283 aaPredicted RBP8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 SEPHS2Q99611 448 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 MRPL57Q9BQC6 102 aaKnown RBP8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 DUSP16Q9BY84 665 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 MAF1Q9H063 256 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms