RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 NRG1Q02297 640 aaPredicted RBP6.66□□□□□ -1.34
PTPRO-208ENST00000542557 TUSC3Q13454 348 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 ITGA9Q13797 1035 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 UBAP2LQ14157 1087 aaKnown RBP6.66□□□□□ -1.34
PTPRO-208ENST00000542557 DSC3Q14574 896 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 CCDC6Q16204 474 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 ANO4Q32M45 955 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 HSP90AA5PQ58FG0 334 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 CD300LGQ6UXG3 332 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 ARHGAP12Q8IWW6 846 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 ULK2Q8IYT8 1036 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 PLD6Q8N2A8 252 aaKnown RBP6.66□□□□□ -1.34
PTPRO-208ENST00000542557 CNTD1Q8N815 330 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 TRPV1Q8NER1 839 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 VPS39Q96JC1 886 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 AGAP2Q99490 1192 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 IL12RB2Q99665 862 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 PAAF1Q9BRP4 392 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 RHOBTB2Q9BYZ6 727 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 SMOC2Q9H3U7 446 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 RHOJQ9H4E5 214 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 CATSPERBQ9H7T0 1116 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 MRM3Q9HC36 420 aaKnown RBP6.66□□□□□ -1.34
PTPRO-208ENST00000542557 GPAMQ9HCL2 828 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 ABCC13Q9NSE7 274 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 C20orf96Q9NUD7 363 aaPredicted RBP6.66□□□□□ -1.34
PTPRO-208ENST00000542557 FNIP2Q9P278 1114 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 SNX10Q9Y5X0 201 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 SHROOM3Q8TF72 1996 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 A0A0U1RQF3 1178 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 G3V2L1 256 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 NVLO15381 856 aaKnown RBP6.66□□□□□ -1.34
PTPRO-208ENST00000542557 ATP9BO43861 1147 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 ANXA9O76027 345 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 JCHAINP01591 159 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 C2P06681 752 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 SKIP12755 728 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 PRDX6P30041 224 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 HUNKP57058 714 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 ACTR3P61158 418 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 TSPY1Q01534 308 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 KDSRQ06136 332 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 BLMHQ13867 455 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 PPP2R5DQ14738 602 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 NAA25Q14CX7 972 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 ZRSR2Q15696 482 aaKnown RBP6.66□□□□□ -1.34
PTPRO-208ENST00000542557 UGP2Q16851 508 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 PCID2Q5JVF3 399 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 GNASQ5JWF2 1037 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 METTL21CQ5VZV1 264 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 CXCL17Q6UXB2 119 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 ATG14Q6ZNE5 492 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 LRRC49Q8IUZ0 686 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 ATPAF2Q8N5M1 289 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 GIPC2Q8TF65 315 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 DNAJC9Q8WXX5 260 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 RSPH1Q8WYR4 309 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 ZNF333Q96JL9 665 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 CDH19Q9H159 772 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 AGO3Q9H9G7 860 aaKnown RBP6.66□□□□□ -1.34
PTPRO-208ENST00000542557 NMRAL1Q9HBL8 299 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 CHRAC1Q9NRG0 131 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 PNPOQ9NVS9 261 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 NMRK1Q9NWW6 199 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 MATN3O15232 486 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 TRIM13O60858 407 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 TBX10O75333 385 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 B3GAT3O94766 335 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 COL6A2P12110 1019 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 CCR1P32246 355 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 NUMBP49757 651 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 COPAP53621 1224 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 GEMP55040 296 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 BTKQ06187 659 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 THOC5Q13769 683 aaKnown RBP6.66□□□□□ -1.34
PTPRO-208ENST00000542557 MUM1Q2TAK8 710 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 SNX30Q5VWJ9 437 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 CST9Q5W186 159 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 AFMIDQ63HM1 303 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 TIGD7Q6NT04 549 aaPredicted RBP6.66□□□□□ -1.34
PTPRO-208ENST00000542557 PKN3Q6P5Z2 889 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 ZC3HC1Q86WB0 502 aaKnown RBP6.66□□□□□ -1.34
PTPRO-208ENST00000542557 THEM5Q8N1Q8 247 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 OR10T2Q8NGX3 314 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 FBXO27Q8NI29 283 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 RNF34Q969K3 372 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 CMTM5Q96DZ9 223 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 CELF6Q96J87 481 aaKnown RBP6.66□□□□□ -1.34
PTPRO-208ENST00000542557 SUSD3Q96L08 255 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 PGLYRP2Q96PD5 576 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 TBL1YQ9BQ87 522 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 C1QTNF1Q9BXJ1 281 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 SPC25Q9HBM1 224 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 GLOD4Q9HC38 313 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 IARS2Q9NSE4 1012 aaKnown RBP6.66□□□□□ -1.34
PTPRO-208ENST00000542557 TMLHEQ9NVH6 421 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 ZNF358Q9NW07 568 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 OXSMQ9NWU1 459 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 SLC7A8Q9UHI5 535 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 ANGPTL2Q9UKU9 493 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms