RNA–Protein interactions for RNA: ENST00000542340.1

CACNA2D4-215, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 3

Gene CACNA2D4, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-215ENST00000542340 LINGO4Q6UY18 593 aa20.53■□□□□ 0.88
CACNA2D4-215ENST00000542340 Q6ZVU0 165 aa20.53■□□□□ 0.88
CACNA2D4-215ENST00000542340 GANCQ8TET4 914 aa20.53■□□□□ 0.88
CACNA2D4-215ENST00000542340 DNASE2BQ8WZ79 361 aa20.53■□□□□ 0.88
CACNA2D4-215ENST00000542340 TCEAL3Q969E4 200 aa20.53■□□□□ 0.88
CACNA2D4-215ENST00000542340 CCDC114Q96M63 670 aa20.53■□□□□ 0.88
CACNA2D4-215ENST00000542340 PEBP4Q96S96 227 aa20.53■□□□□ 0.88
CACNA2D4-215ENST00000542340 OMDQ99983 421 aa20.53■□□□□ 0.88
CACNA2D4-215ENST00000542340 SNRNP25Q9BV90 132 aaKnown RBP20.53■□□□□ 0.88
CACNA2D4-215ENST00000542340 NUP85Q9BW27 656 aa20.53■□□□□ 0.88
CACNA2D4-215ENST00000542340 RBSNQ9H1K0 784 aa20.53■□□□□ 0.88
CACNA2D4-215ENST00000542340 DEF6Q9H4E7 631 aa20.53■□□□□ 0.88
CACNA2D4-215ENST00000542340 DHX35Q9H5Z1 703 aaKnown RBP20.53■□□□□ 0.88
CACNA2D4-215ENST00000542340 DONSONQ9NYP3 566 aa20.53■□□□□ 0.88
CACNA2D4-215ENST00000542340 CDV3Q9UKY7 258 aaKnown RBP20.53■□□□□ 0.88
CACNA2D4-215ENST00000542340 FZD4Q9ULV1 537 aa20.53■□□□□ 0.88
CACNA2D4-215ENST00000542340 HPCAL4Q9UM19 191 aa20.53■□□□□ 0.88
CACNA2D4-215ENST00000542340 FARP1Q9Y4F1 1045 aaPredicted RBP20.53■□□□□ 0.88
CACNA2D4-215ENST00000542340 PATE3B3GLJ2 98 aa20.52■□□□□ 0.88
CACNA2D4-215ENST00000542340 AKR1B15C9JRZ8 316 aaPredicted RBP20.52■□□□□ 0.88
CACNA2D4-215ENST00000542340 SMAD6O43541 496 aaKnown RBP20.52■□□□□ 0.88
CACNA2D4-215ENST00000542340 SEMA4FO95754 770 aa20.52■□□□□ 0.88
CACNA2D4-215ENST00000542340 IL1BP01584 269 aa20.52■□□□□ 0.88
CACNA2D4-215ENST00000542340 PSMD8P48556 350 aa20.52■□□□□ 0.88
CACNA2D4-215ENST00000542340 SERPINH1P50454 418 aaKnown RBP20.52■□□□□ 0.88
CACNA2D4-215ENST00000542340 LIMK1P53667 647 aa20.52■□□□□ 0.88
CACNA2D4-215ENST00000542340 YBEYP58557 167 aaPredicted RBP20.52■□□□□ 0.88
CACNA2D4-215ENST00000542340 TPI1P60174 286 aa20.52■□□□□ 0.88
CACNA2D4-215ENST00000542340 ARF5P84085 180 aa20.52■□□□□ 0.88
CACNA2D4-215ENST00000542340 PUM1Q14671 1186 aaKnown RBP eCLIP20.52■□□□□ 0.88
CACNA2D4-215ENST00000542340 DUOXA1Q1HG43 343 aa20.52■□□□□ 0.88
CACNA2D4-215ENST00000542340 TRIM61Q5EBN2 209 aa20.52■□□□□ 0.88
CACNA2D4-215ENST00000542340 FAM46CQ5VWP2 391 aa20.52■□□□□ 0.88
CACNA2D4-215ENST00000542340 SLC23A3Q6PIS1 610 aa20.52■□□□□ 0.88
CACNA2D4-215ENST00000542340 CYP4V2Q6ZWL3 525 aaPredicted RBP20.52■□□□□ 0.88
CACNA2D4-215ENST00000542340 RGL4Q8IZJ4 473 aa20.52■□□□□ 0.88
CACNA2D4-215ENST00000542340 NIPA2Q8N8Q9 360 aa20.52■□□□□ 0.88
CACNA2D4-215ENST00000542340 ARHGEF26Q96DR7 871 aa20.52■□□□□ 0.88
CACNA2D4-215ENST00000542340 CEP44Q9C0F1 390 aa20.52■□□□□ 0.88
CACNA2D4-215ENST00000542340 RXFP3Q9NSD7 469 aa20.52■□□□□ 0.88
CACNA2D4-215ENST00000542340 GPATCH2LQ9NWQ4 482 aa20.52■□□□□ 0.88
CACNA2D4-215ENST00000542340 IP6K2Q9UHH9 426 aa20.52■□□□□ 0.88
CACNA2D4-215ENST00000542340 PPM1HQ9ULR3 514 aa20.52■□□□□ 0.88
CACNA2D4-215ENST00000542340 CEP192Q8TEP8 1941 aa20.52■□□□□ 0.88
CACNA2D4-215ENST00000542340 TNRC6BQ9UPQ9 1833 aaKnown RBP20.52■□□□□ 0.88
CACNA2D4-215ENST00000542340 ATXN2Q99700 1313 aaKnown RBP20.52■□□□□ 0.87
CACNA2D4-215ENST00000542340 A0A1W2PP55 124 aa20.51■□□□□ 0.87
CACNA2D4-215ENST00000542340 MEI4A8MW99 385 aa20.51■□□□□ 0.87
CACNA2D4-215ENST00000542340 AKR1B10O60218 316 aa20.51■□□□□ 0.87
CACNA2D4-215ENST00000542340 RNASEH2AO75792 299 aaKnown RBP20.51■□□□□ 0.87
CACNA2D4-215ENST00000542340 GOT1P17174 413 aa20.51■□□□□ 0.87
CACNA2D4-215ENST00000542340 ZNF135P52742 658 aaPredicted RBP20.51■□□□□ 0.87
CACNA2D4-215ENST00000542340 GEMIN4P57678 1058 aaKnown RBP20.51■□□□□ 0.87
CACNA2D4-215ENST00000542340 IRX4P78413 519 aa20.51■□□□□ 0.87
CACNA2D4-215ENST00000542340 CA9Q16790 459 aa20.51■□□□□ 0.87
CACNA2D4-215ENST00000542340 BOLA3Q53S33 107 aa20.51■□□□□ 0.87
CACNA2D4-215ENST00000542340 DCAF12L1Q5VU92 463 aa20.51■□□□□ 0.87
CACNA2D4-215ENST00000542340 C22orf39Q6P5X5 142 aa20.51■□□□□ 0.87
CACNA2D4-215ENST00000542340 UMODL1-AS1Q8N2C9 162 aa20.51■□□□□ 0.87
CACNA2D4-215ENST00000542340 AADATQ8N5Z0 425 aa20.51■□□□□ 0.87
CACNA2D4-215ENST00000542340 OR2A12Q8NGT7 310 aa20.51■□□□□ 0.87
CACNA2D4-215ENST00000542340 CCDC42Q96M95 316 aa20.51■□□□□ 0.87
CACNA2D4-215ENST00000542340 CHP1Q99653 195 aa20.51■□□□□ 0.87
CACNA2D4-215ENST00000542340 NUSAP1Q9BXS6 441 aaKnown RBP20.51■□□□□ 0.87
CACNA2D4-215ENST00000542340 NEUROG2Q9H2A3 272 aa20.51■□□□□ 0.87
CACNA2D4-215ENST00000542340 NOL6Q9H6R4 1146 aaKnown RBP20.51■□□□□ 0.87
CACNA2D4-215ENST00000542340 SERGEFQ9UGK8 458 aa20.51■□□□□ 0.87
CACNA2D4-215ENST00000542340 SUSD2Q9UGT4 822 aa20.51■□□□□ 0.87
CACNA2D4-215ENST00000542340 ANAPC7Q9UJX3 599 aa20.51■□□□□ 0.87
CACNA2D4-215ENST00000542340 LNP1A1A4G5 178 aa20.5■□□□□ 0.87
CACNA2D4-215ENST00000542340 C1QTNF3-AMACRE9PGA6 284 aa20.5■□□□□ 0.87
CACNA2D4-215ENST00000542340 MYO1FO00160 1098 aa20.5■□□□□ 0.87
CACNA2D4-215ENST00000542340 EEF2KO00418 725 aaKnown RBP20.5■□□□□ 0.87
CACNA2D4-215ENST00000542340 SLC30A4O14863 429 aa20.5■□□□□ 0.87
CACNA2D4-215ENST00000542340 KDELR3O43731 214 aa20.5■□□□□ 0.87
CACNA2D4-215ENST00000542340 BNIP3LO60238 219 aa20.5■□□□□ 0.87
CACNA2D4-215ENST00000542340 CD160O95971 181 aa20.5■□□□□ 0.87
CACNA2D4-215ENST00000542340 SERPINF2P08697 491 aa20.5■□□□□ 0.87
CACNA2D4-215ENST00000542340 H2AFZP0C0S5 128 aa20.5■□□□□ 0.87
CACNA2D4-215ENST00000542340 GNSP15586 552 aa20.5■□□□□ 0.87
CACNA2D4-215ENST00000542340 MAOBP27338 520 aa20.5■□□□□ 0.87
CACNA2D4-215ENST00000542340 PARP15Q460N3 678 aa20.5■□□□□ 0.87
CACNA2D4-215ENST00000542340 H2AFVQ71UI9 128 aa20.5■□□□□ 0.87
CACNA2D4-215ENST00000542340 HDDC3Q8N4P3 179 aa20.5■□□□□ 0.87
CACNA2D4-215ENST00000542340 PCDH20Q8N6Y1 951 aaKnown RBP20.5■□□□□ 0.87
CACNA2D4-215ENST00000542340 CTNNBL1Q8WYA6 563 aaPredicted RBP20.5■□□□□ 0.87
CACNA2D4-215ENST00000542340 KCTD15Q96SI1 283 aaPredicted RBP20.5■□□□□ 0.87
CACNA2D4-215ENST00000542340 C6orf106Q9H6K1 298 aaPredicted RBP20.5■□□□□ 0.87
CACNA2D4-215ENST00000542340 NHEJ1Q9H9Q4 299 aaPredicted RBP20.5■□□□□ 0.87
CACNA2D4-215ENST00000542340 UVRAGQ9P2Y5 699 aa20.5■□□□□ 0.87
CACNA2D4-215ENST00000542340 SLC6A14Q9UN76 642 aa20.5■□□□□ 0.87
CACNA2D4-215ENST00000542340 CHD5Q8TDI0 1954 aa20.49■□□□□ 0.87
CACNA2D4-215ENST00000542340 ZSCAN5CA6NGD5 496 aaPredicted RBP20.49■□□□□ 0.87
CACNA2D4-215ENST00000542340 ZNF821O75541 412 aaPredicted RBP20.49■□□□□ 0.87
CACNA2D4-215ENST00000542340 CHRNA3P32297 505 aa20.49■□□□□ 0.87
CACNA2D4-215ENST00000542340 DRD3P35462 400 aa20.49■□□□□ 0.87
CACNA2D4-215ENST00000542340 RECQLP46063 649 aaPredicted RBP20.49■□□□□ 0.87
CACNA2D4-215ENST00000542340 HCAR3P49019 387 aa20.49■□□□□ 0.87
CACNA2D4-215ENST00000542340 GAS2L3Q86XJ1 694 aa20.49■□□□□ 0.87
CACNA2D4-215ENST00000542340 TMIEQ8NEW7 156 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms