RNA–Protein interactions for RNA: ENST00000542133.5

NPIPB4-215, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 3

Gene NPIPB4, Length 910 nt, Biotype nonsense mediated decay.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-215ENST00000542133 JAMLQ86YT9 394 aa7.99□□□□□ -1.13
NPIPB4-215ENST00000542133 MYLK4Q86YV6 388 aaPredicted RBP7.99□□□□□ -1.13
NPIPB4-215ENST00000542133 GOLGA6L1Q8N7Z2 621 aa7.99□□□□□ -1.13
NPIPB4-215ENST00000542133 ZNF366Q8N895 744 aa7.99□□□□□ -1.13
NPIPB4-215ENST00000542133 CACTINQ8WUQ7 758 aaKnown RBP7.99□□□□□ -1.13
NPIPB4-215ENST00000542133 TEKT4Q8WW24 435 aa7.99□□□□□ -1.13
NPIPB4-215ENST00000542133 EXTL1Q92935 676 aa7.99□□□□□ -1.13
NPIPB4-215ENST00000542133 JAKMIP2Q96AA8 810 aa7.99□□□□□ -1.13
NPIPB4-215ENST00000542133 SAAL1Q96ER3 474 aa7.99□□□□□ -1.13
NPIPB4-215ENST00000542133 HPDLQ96IR7 371 aa7.99□□□□□ -1.13
NPIPB4-215ENST00000542133 KCNK16Q96T55 309 aa7.99□□□□□ -1.13
NPIPB4-215ENST00000542133 PLIN2Q99541 437 aa7.99□□□□□ -1.13
NPIPB4-215ENST00000542133 FAM213AQ9BRX8 229 aa7.99□□□□□ -1.13
NPIPB4-215ENST00000542133 B3GNT5Q9BYG0 378 aa7.99□□□□□ -1.13
NPIPB4-215ENST00000542133 TMEM245Q9H330 911 aa7.99□□□□□ -1.13
NPIPB4-215ENST00000542133 FOXP1Q9H334 677 aaPredicted RBP7.99□□□□□ -1.13
NPIPB4-215ENST00000542133 ERVMER34-1Q9H9K5 563 aa7.99□□□□□ -1.13
NPIPB4-215ENST00000542133 FBRSQ9HAH7 460 aa7.99□□□□□ -1.13
NPIPB4-215ENST00000542133 CYLDQ9NQC7 956 aa7.99□□□□□ -1.13
NPIPB4-215ENST00000542133 SMYD2Q9NRG4 433 aa7.99□□□□□ -1.13
NPIPB4-215ENST00000542133 RASSF1Q9NS23 344 aa7.99□□□□□ -1.13
NPIPB4-215ENST00000542133 RBAKQ9NYW8 714 aaPredicted RBP7.99□□□□□ -1.13
NPIPB4-215ENST00000542133 CLEC4EQ9ULY5 219 aa7.99□□□□□ -1.13
NPIPB4-215ENST00000542133 SATB2Q9UPW6 733 aa7.99□□□□□ -1.13
NPIPB4-215ENST00000542133 LRBAP50851 2863 aa7.99□□□□□ -1.13
NPIPB4-215ENST00000542133 A0A1B0GVM2 712 aa7.98□□□□□ -1.13
NPIPB4-215ENST00000542133 BLACEA4D250 179 aa7.98□□□□□ -1.13
NPIPB4-215ENST00000542133 FAM47DPA6NHR8 397 aa7.98□□□□□ -1.13
NPIPB4-215ENST00000542133 PRMT3O60678 531 aa7.98□□□□□ -1.13
NPIPB4-215ENST00000542133 SDC3O75056 442 aa7.98□□□□□ -1.13
NPIPB4-215ENST00000542133 SMC2O95347 1197 aa7.98□□□□□ -1.13
NPIPB4-215ENST00000542133 ITGB2P05107 769 aa7.98□□□□□ -1.13
NPIPB4-215ENST00000542133 FAM87AP0C7U9 286 aa7.98□□□□□ -1.13
NPIPB4-215ENST00000542133 PTPN1P18031 435 aaKnown RBP7.98□□□□□ -1.13
NPIPB4-215ENST00000542133 VARSP26640 1264 aaKnown RBP7.98□□□□□ -1.13
NPIPB4-215ENST00000542133 RBMS1P29558 406 aaKnown RBP7.98□□□□□ -1.13
NPIPB4-215ENST00000542133 CTAG1AP78358 180 aa7.98□□□□□ -1.13
NPIPB4-215ENST00000542133 CLDN10P78369 228 aa7.98□□□□□ -1.13
NPIPB4-215ENST00000542133 NUCB2P80303 420 aa7.98□□□□□ -1.13
NPIPB4-215ENST00000542133 MRPS35P82673 323 aaKnown RBP7.98□□□□□ -1.13
NPIPB4-215ENST00000542133 DAB2P98082 770 aa7.98□□□□□ -1.13
NPIPB4-215ENST00000542133 ZNF211Q13398 564 aaPredicted RBP7.98□□□□□ -1.13
NPIPB4-215ENST00000542133 KCNJ12Q14500 433 aa7.98□□□□□ -1.13
NPIPB4-215ENST00000542133 RASA2Q15283 850 aa7.98□□□□□ -1.13
NPIPB4-215ENST00000542133 ME3Q16798 604 aa7.98□□□□□ -1.13
NPIPB4-215ENST00000542133 SGO2Q562F6 1265 aa7.98□□□□□ -1.13
NPIPB4-215ENST00000542133 HIST2H2BCQ6DN03 193 aa7.98□□□□□ -1.13
NPIPB4-215ENST00000542133 NCEH1Q6PIU2 408 aa7.98□□□□□ -1.13
NPIPB4-215ENST00000542133 NEK10Q6ZWH5 1172 aa7.98□□□□□ -1.13
NPIPB4-215ENST00000542133 RSRC2Q7L4I2 434 aaKnown RBP7.98□□□□□ -1.13
NPIPB4-215ENST00000542133 SDCCAG8Q86SQ7 713 aaPredicted RBP7.98□□□□□ -1.13
NPIPB4-215ENST00000542133 FAM35AQ86V20 835 aa7.98□□□□□ -1.13
NPIPB4-215ENST00000542133 CCDC83Q8IWF9 413 aa7.98□□□□□ -1.13
NPIPB4-215ENST00000542133 B3GALNT2Q8NCR0 500 aa7.98□□□□□ -1.13
NPIPB4-215ENST00000542133 SNX21Q969T3 373 aa7.98□□□□□ -1.13
NPIPB4-215ENST00000542133 C1orf74Q96LT6 269 aa7.98□□□□□ -1.13
NPIPB4-215ENST00000542133 CCNL2Q96S94 520 aaPredicted RBP7.98□□□□□ -1.13
NPIPB4-215ENST00000542133 SPSB2Q99619 263 aa7.98□□□□□ -1.13
NPIPB4-215ENST00000542133 SEMA3CQ99985 751 aa7.98□□□□□ -1.13
NPIPB4-215ENST00000542133 ARHGAP9Q9BRR9 750 aa7.98□□□□□ -1.13
NPIPB4-215ENST00000542133 ST6GALNAC4Q9H4F1 302 aa7.98□□□□□ -1.13
NPIPB4-215ENST00000542133 PDE11AQ9HCR9 933 aa7.98□□□□□ -1.13
NPIPB4-215ENST00000542133 DMAP1Q9NPF5 467 aaPredicted RBP7.98□□□□□ -1.13
NPIPB4-215ENST00000542133 OSER1Q9NX31 292 aa7.98□□□□□ -1.13
NPIPB4-215ENST00000542133 IL20Q9NYY1 176 aa7.98□□□□□ -1.13
NPIPB4-215ENST00000542133 CHMP5Q9NZZ3 219 aa7.98□□□□□ -1.13
NPIPB4-215ENST00000542133 SERGEFQ9UGK8 458 aa7.98□□□□□ -1.13
NPIPB4-215ENST00000542133 ATXN7L1Q9ULK2 861 aaPredicted RBP7.98□□□□□ -1.13
NPIPB4-215ENST00000542133 SRPK3Q9UPE1 567 aa7.98□□□□□ -1.13
NPIPB4-215ENST00000542133 MORC2Q9Y6X9 1032 aaPredicted RBP7.98□□□□□ -1.13
NPIPB4-215ENST00000542133 CENPEQ02224 2701 aa7.98□□□□□ -1.13
NPIPB4-215ENST00000542133 ICE1Q9Y2F5 2266 aa7.98□□□□□ -1.13
NPIPB4-215ENST00000542133 PMS2P1A4D2B8 440 aa7.97□□□□□ -1.13
NPIPB4-215ENST00000542133 CDRT15L2A8MXV6 281 aa7.97□□□□□ -1.13
NPIPB4-215ENST00000542133 TLR4O00206 839 aa7.97□□□□□ -1.13
NPIPB4-215ENST00000542133 MDM4O15151 490 aa7.97□□□□□ -1.13
NPIPB4-215ENST00000542133 EFSO43281 561 aa7.97□□□□□ -1.13
NPIPB4-215ENST00000542133 ATP9BO43861 1147 aa7.97□□□□□ -1.13
NPIPB4-215ENST00000542133 TBCAO75347 108 aaKnown RBP7.97□□□□□ -1.13
NPIPB4-215ENST00000542133 TACC1O75410 805 aa7.97□□□□□ -1.13
NPIPB4-215ENST00000542133 ERLIN1O75477 346 aa7.97□□□□□ -1.13
NPIPB4-215ENST00000542133 B3GALNT1O75752 331 aa7.97□□□□□ -1.13
NPIPB4-215ENST00000542133 STC2O76061 302 aa7.97□□□□□ -1.13
NPIPB4-215ENST00000542133 FERP16591 822 aa7.97□□□□□ -1.13
NPIPB4-215ENST00000542133 SOX11P35716 441 aa7.97□□□□□ -1.13
NPIPB4-215ENST00000542133 ATP5C1P36542 298 aaKnown RBP7.97□□□□□ -1.13
NPIPB4-215ENST00000542133 GNL1P36915 607 aaPredicted RBP7.97□□□□□ -1.13
NPIPB4-215ENST00000542133 AFMP43652 599 aa7.97□□□□□ -1.13
NPIPB4-215ENST00000542133 MXI1P50539 228 aa7.97□□□□□ -1.13
NPIPB4-215ENST00000542133 TOB1P50616 345 aaPredicted RBP7.97□□□□□ -1.13
NPIPB4-215ENST00000542133 GALCP54803 685 aa7.97□□□□□ -1.13
NPIPB4-215ENST00000542133 RIPPLY3P57055 190 aa7.97□□□□□ -1.13
NPIPB4-215ENST00000542133 APBA1Q02410 837 aa7.97□□□□□ -1.13
NPIPB4-215ENST00000542133 ISXQ2M1V0 245 aa7.97□□□□□ -1.13
NPIPB4-215ENST00000542133 FNDC3BQ53EP0 1204 aaKnown RBP7.97□□□□□ -1.13
NPIPB4-215ENST00000542133 ANKRD39Q53RE8 183 aa7.97□□□□□ -1.13
NPIPB4-215ENST00000542133 ZNF776Q68DI1 518 aaPredicted RBP7.97□□□□□ -1.13
NPIPB4-215ENST00000542133 ZNF787Q6DD87 383 aa7.97□□□□□ -1.13
NPIPB4-215ENST00000542133 DTHD1Q6ZMT9 781 aa7.97□□□□□ -1.13
NPIPB4-215ENST00000542133 USP30Q70CQ3 517 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms