RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 ZKSCAN8Q15776 578 aaPredicted RBP3.52□□□□□ -1.85
USP28-210ENST00000542033 GXYLT1Q4G148 440 aa3.52□□□□□ -1.85
USP28-210ENST00000542033 MIDNQ504T8 468 aa3.52□□□□□ -1.85
USP28-210ENST00000542033 KIAA1755Q5JYT7 1200 aa3.52□□□□□ -1.85
USP28-210ENST00000542033 SLC30A9Q6PML9 568 aa3.52□□□□□ -1.85
USP28-210ENST00000542033 B4GALNT4Q76KP1 1039 aa3.52□□□□□ -1.85
USP28-210ENST00000542033 RTL10Q7L3V2 364 aa3.52□□□□□ -1.85
USP28-210ENST00000542033 TBC1D1Q86TI0 1168 aaPredicted RBP3.52□□□□□ -1.85
USP28-210ENST00000542033 NBPF5PQ86XG9 351 aaPredicted RBP3.52□□□□□ -1.85
USP28-210ENST00000542033 DDIASQ8IXT1 998 aa3.52□□□□□ -1.85
USP28-210ENST00000542033 ANKRD44Q8N8A2 993 aa3.52□□□□□ -1.85
USP28-210ENST00000542033 EXD3Q8N9H8 876 aa3.52□□□□□ -1.85
USP28-210ENST00000542033 IP6K1Q92551 441 aa3.52□□□□□ -1.85
USP28-210ENST00000542033 CENPIQ92674 756 aaPredicted RBP3.52□□□□□ -1.85
USP28-210ENST00000542033 RILPL2Q969X0 211 aa3.52□□□□□ -1.85
USP28-210ENST00000542033 RBM17Q96I25 401 aaKnown RBP3.52□□□□□ -1.85
USP28-210ENST00000542033 TRMOQ9BU70 441 aa3.52□□□□□ -1.85
USP28-210ENST00000542033 HDHD5Q9BXW7 423 aa3.52□□□□□ -1.85
USP28-210ENST00000542033 SPRTNQ9H040 489 aaPredicted RBP3.52□□□□□ -1.85
USP28-210ENST00000542033 TSPYL1Q9H0U9 437 aa3.52□□□□□ -1.85
USP28-210ENST00000542033 AAMDCQ9H7C9 122 aa3.52□□□□□ -1.85
USP28-210ENST00000542033 RMI1Q9H9A7 625 aa3.52□□□□□ -1.85
USP28-210ENST00000542033 NOD2Q9HC29 1040 aa3.52□□□□□ -1.85
USP28-210ENST00000542033 FBXO4Q9UKT5 387 aa3.52□□□□□ -1.85
USP28-210ENST00000542033 LAMP3Q9UQV4 416 aa3.52□□□□□ -1.85
USP28-210ENST00000542033 HS3ST3B1Q9Y662 390 aa3.52□□□□□ -1.85
USP28-210ENST00000542033 KAT6BQ8WYB5 2073 aa3.51□□□□□ -1.85
USP28-210ENST00000542033 TRBV5-3A0A0A0MS03 114 aa3.51□□□□□ -1.85
USP28-210ENST00000542033 KIR2DS5A0A0G2JLQ3 304 aa3.51□□□□□ -1.85
USP28-210ENST00000542033 DYTNA2CJ06 578 aa3.51□□□□□ -1.85
USP28-210ENST00000542033 TMEM247A6NEH6 219 aa3.51□□□□□ -1.85
USP28-210ENST00000542033 NPIPB13A6NJU9 1138 aa3.51□□□□□ -1.85
USP28-210ENST00000542033 SAC3D1A6NKF1 404 aa3.51□□□□□ -1.85
USP28-210ENST00000542033 NPIPB5A8MRT5 1133 aa3.51□□□□□ -1.85
USP28-210ENST00000542033 PRSS47A8MTI9 375 aa3.51□□□□□ -1.85
USP28-210ENST00000542033 KCNJ18B7U540 433 aa3.51□□□□□ -1.85
USP28-210ENST00000542033 NPIPB4C9JG80 1138 aa3.51□□□□□ -1.85
USP28-210ENST00000542033 F5H0A9 414 aaPredicted RBP3.51□□□□□ -1.85
USP28-210ENST00000542033 STX16-NPEPL1H3BU86 382 aa3.51□□□□□ -1.85
USP28-210ENST00000542033 K7ENM7 598 aa3.51□□□□□ -1.85
USP28-210ENST00000542033 KIR2DS3K7RE56 304 aa3.51□□□□□ -1.85
USP28-210ENST00000542033 STX16O14662 325 aa3.51□□□□□ -1.85
USP28-210ENST00000542033 ANP32CO43423 234 aa3.51□□□□□ -1.85
USP28-210ENST00000542033 ZC3H11AO75152 810 aaKnown RBP eCLIP3.51□□□□□ -1.857e-6■■■■■ 33.7
USP28-210ENST00000542033 LCKP06239 509 aa3.51□□□□□ -1.85
USP28-210ENST00000542033 CYP4B1P13584 511 aa3.51□□□□□ -1.85
USP28-210ENST00000542033 ACP5P13686 325 aa3.51□□□□□ -1.85
USP28-210ENST00000542033 ME1P48163 572 aa3.51□□□□□ -1.85
USP28-210ENST00000542033 CYP2J2P51589 502 aa3.51□□□□□ -1.85
USP28-210ENST00000542033 NAP1L1P55209 391 aaKnown RBP3.51□□□□□ -1.85
USP28-210ENST00000542033 MAP2K1Q02750 393 aaPredicted RBP3.51□□□□□ -1.85
USP28-210ENST00000542033 GAD2Q05329 585 aa3.51□□□□□ -1.85
USP28-210ENST00000542033 PMPCAQ10713 525 aa3.51□□□□□ -1.85
USP28-210ENST00000542033 MTX1Q13505 466 aa3.51□□□□□ -1.85
USP28-210ENST00000542033 SLC12A1Q13621 1099 aa3.51□□□□□ -1.85
USP28-210ENST00000542033 THOC5Q13769 683 aaKnown RBP3.51□□□□□ -1.85
USP28-210ENST00000542033 MYBPC2Q14324 1141 aa3.51□□□□□ -1.85
USP28-210ENST00000542033 ANKRD1Q15327 319 aa3.51□□□□□ -1.85
USP28-210ENST00000542033 TWIST1Q15672 202 aa3.51□□□□□ -1.85
USP28-210ENST00000542033 CCDC96Q2M329 555 aa3.51□□□□□ -1.85
USP28-210ENST00000542033 CTXN3Q4LDR2 81 aa3.51□□□□□ -1.85
USP28-210ENST00000542033 ALG10Q5BKT4 473 aa3.51□□□□□ -1.85
USP28-210ENST00000542033 ALG10BQ5I7T1 473 aa3.51□□□□□ -1.85
USP28-210ENST00000542033 ZNF484Q5JVG2 852 aa3.51□□□□□ -1.85
USP28-210ENST00000542033 DNTTIP2Q5QJE6 756 aaKnown RBP3.51□□□□□ -1.85
USP28-210ENST00000542033 TTC39AQ5SRH9 613 aa3.51□□□□□ -1.85
USP28-210ENST00000542033 MAP3K21Q5TCX8 1036 aa3.51□□□□□ -1.85
USP28-210ENST00000542033 SPATA1Q5VX52 437 aa3.51□□□□□ -1.85
USP28-210ENST00000542033 MTFR2Q6P444 385 aa3.51□□□□□ -1.85
USP28-210ENST00000542033 BRINP3Q76B58 766 aa3.51□□□□□ -1.85
USP28-210ENST00000542033 IGFN1Q86VF2 1251 aa3.51□□□□□ -1.85
USP28-210ENST00000542033 HEATR4Q86WZ0 1026 aa3.51□□□□□ -1.85
USP28-210ENST00000542033 SCN4BQ8IWT1 228 aa3.51□□□□□ -1.85
USP28-210ENST00000542033 ARFGAP1Q8N6T3 406 aa3.51□□□□□ -1.85
USP28-210ENST00000542033 MPLKIPQ8TAP9 179 aa3.51□□□□□ -1.85
USP28-210ENST00000542033 FAM110DQ8TAY7 271 aaPredicted RBP3.51□□□□□ -1.85
USP28-210ENST00000542033 WIPF2Q8TF74 440 aaPredicted RBP3.51□□□□□ -1.85
USP28-210ENST00000542033 HTRA1Q92743 480 aa3.51□□□□□ -1.85
USP28-210ENST00000542033 ZFYVE19Q96K21 471 aa3.51□□□□□ -1.85
USP28-210ENST00000542033 COG8Q96MW5 612 aa3.51□□□□□ -1.85
USP28-210ENST00000542033 TSPAN18Q96SJ8 248 aa3.51□□□□□ -1.85
USP28-210ENST00000542033 ARHGAP39Q9C0H5 1083 aa3.51□□□□□ -1.85
USP28-210ENST00000542033 PNNQ9H307 717 aaKnown RBP3.51□□□□□ -1.85
USP28-210ENST00000542033 ACAD9Q9H845 621 aa3.51□□□□□ -1.85
USP28-210ENST00000542033 THSD1Q9NS62 852 aa3.51□□□□□ -1.85
USP28-210ENST00000542033 BLOC1S4Q9NUP1 217 aa3.51□□□□□ -1.85
USP28-210ENST00000542033 THAP1Q9NVV9 213 aa3.51□□□□□ -1.85
USP28-210ENST00000542033 IRAK4Q9NWZ3 460 aa3.51□□□□□ -1.85
USP28-210ENST00000542033 HEY2Q9UBP5 337 aa3.51□□□□□ -1.85
USP28-210ENST00000542033 KLQ9UEF7 1012 aa3.51□□□□□ -1.85
USP28-210ENST00000542033 POLG2Q9UHN1 485 aa3.51□□□□□ -1.85
USP28-210ENST00000542033 SUFUQ9UMX1 484 aa3.51□□□□□ -1.85
USP28-210ENST00000542033 AFG3L2Q9Y4W6 797 aa3.51□□□□□ -1.85
USP28-210ENST00000542033 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.51□□□□□ -1.85
USP28-210ENST00000542033 ZCCHC6Q5VYS8 1495 aaKnown RBP3.51□□□□□ -1.85
USP28-210ENST00000542033 TCRBV7S3A2A0A539 114 aa3.5□□□□□ -1.85
USP28-210ENST00000542033 ANKRD18BA2A2Z9 1011 aa3.5□□□□□ -1.85
USP28-210ENST00000542033 FOXO6A8MYZ6 492 aa3.5□□□□□ -1.85
USP28-210ENST00000542033 TBX18O95935 607 aa3.5□□□□□ -1.85
USP28-210ENST00000542033 IGKV2-30P06310 120 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms