RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 THUMPD3Q9BV44 507 aaKnown RBP16.36■□□□□ 0.21
VARS2-212ENST00000542001 CINPQ9BW66 212 aaPredicted RBP16.36■□□□□ 0.21
VARS2-212ENST00000542001 COLEC11Q9BWP8 271 aa16.36■□□□□ 0.21
VARS2-212ENST00000542001 CLIC5Q9NZA1 410 aa16.36■□□□□ 0.21
VARS2-212ENST00000542001 GRM3Q14832 879 aa16.36■□□□□ 0.21
VARS2-212ENST00000542001 HS6ST3Q8IZP7 471 aa16.36■□□□□ 0.21
VARS2-212ENST00000542001 PCYOX1LQ8NBM8 494 aa16.36■□□□□ 0.21
VARS2-212ENST00000542001 OR6Y1Q8NGX8 325 aa16.36■□□□□ 0.21
VARS2-212ENST00000542001 UCMAQ8WVF2 138 aa16.36■□□□□ 0.21
VARS2-212ENST00000542001 PCED1BQ96HM7 432 aa16.36■□□□□ 0.21
VARS2-212ENST00000542001 CYP2S1Q96SQ9 504 aa16.36■□□□□ 0.21
VARS2-212ENST00000542001 ZBED2Q9BTP6 218 aa16.36■□□□□ 0.21
VARS2-212ENST00000542001 TIAM2Q8IVF5 1701 aa16.35■□□□□ 0.21
VARS2-212ENST00000542001 TOGARAM1Q9Y4F4 1720 aa16.35■□□□□ 0.21
VARS2-212ENST00000542001 PMM2O15305 246 aa16.35■□□□□ 0.21
VARS2-212ENST00000542001 CHRNGP07510 517 aa16.35■□□□□ 0.21
VARS2-212ENST00000542001 COX4I1P13073 169 aa16.35■□□□□ 0.21
VARS2-212ENST00000542001 NMBRP28336 390 aa16.35■□□□□ 0.21
VARS2-212ENST00000542001 AKT1P31749 480 aa16.35■□□□□ 0.21
VARS2-212ENST00000542001 HARS2P49590 506 aaKnown RBP16.35■□□□□ 0.21
VARS2-212ENST00000542001 IRF9Q00978 393 aa16.35■□□□□ 0.21
VARS2-212ENST00000542001 FASTKQ14296 549 aaKnown RBP16.35■□□□□ 0.21
VARS2-212ENST00000542001 MAPRE2Q15555 327 aa16.35■□□□□ 0.21
VARS2-212ENST00000542001 RPS27LQ71UM5 84 aaKnown RBP16.35■□□□□ 0.21
VARS2-212ENST00000542001 ARHGEF3Q9NR81 526 aa16.35■□□□□ 0.21
VARS2-212ENST00000542001 FAM105AQ9NUU6 356 aa16.35■□□□□ 0.21
VARS2-212ENST00000542001 PNMA8BQ9ULN7 279 aaPredicted RBP16.35■□□□□ 0.21
VARS2-212ENST00000542001 ARHGAP1Q07960 439 aa16.35■□□□□ 0.21
VARS2-212ENST00000542001 PRKAA1Q13131 559 aa16.35■□□□□ 0.21
VARS2-212ENST00000542001 ESRP1Q6NXG1 681 aaKnown RBP16.35■□□□□ 0.21
VARS2-212ENST00000542001 DPY19L2P1Q6NXN4 242 aa16.35■□□□□ 0.21
VARS2-212ENST00000542001 UBE2OQ9C0C9 1292 aaKnown RBP16.35■□□□□ 0.21
VARS2-212ENST00000542001 MOSPD1Q9UJG1 213 aa16.35■□□□□ 0.21
VARS2-212ENST00000542001 FBXO5Q9UKT4 447 aa16.35■□□□□ 0.21
VARS2-212ENST00000542001 ZNF711Q9Y462 761 aa16.35■□□□□ 0.21
VARS2-212ENST00000542001 SIPA1L3O60292 1781 aaPredicted RBP16.35■□□□□ 0.21
VARS2-212ENST00000542001 MYH4Q9Y623 1939 aa16.35■□□□□ 0.21
VARS2-212ENST00000542001 PEX11AO75192 247 aa16.35■□□□□ 0.21
VARS2-212ENST00000542001 L1CAMP32004 1257 aa16.35■□□□□ 0.21
VARS2-212ENST00000542001 RPL14P50914 215 aaKnown RBP16.35■□□□□ 0.21
VARS2-212ENST00000542001 STX5Q13190 355 aa16.35■□□□□ 0.21
VARS2-212ENST00000542001 MRNIPQ6NTE8 343 aa16.35■□□□□ 0.21
VARS2-212ENST00000542001 HDAC10Q969S8 669 aa16.35■□□□□ 0.21
VARS2-212ENST00000542001 ESAMQ96AP7 390 aa16.35■□□□□ 0.21
VARS2-212ENST00000542001 NXNL1Q96CM4 212 aa16.35■□□□□ 0.21
VARS2-212ENST00000542001 BEGAINQ9BUH8 593 aa16.35■□□□□ 0.21
VARS2-212ENST00000542001 INPP4BO15327 924 aa16.35■□□□□ 0.21
VARS2-212ENST00000542001 GLP2RO95838 553 aa16.35■□□□□ 0.21
VARS2-212ENST00000542001 TFEBP19484 476 aa16.35■□□□□ 0.21
VARS2-212ENST00000542001 CCR10P46092 362 aa16.35■□□□□ 0.21
VARS2-212ENST00000542001 FSTL4Q6MZW2 842 aa16.35■□□□□ 0.21
VARS2-212ENST00000542001 LGI2Q8N0V4 545 aa16.35■□□□□ 0.21
VARS2-212ENST00000542001 CARNMT1Q8N4J0 409 aa16.35■□□□□ 0.21
VARS2-212ENST00000542001 PIGVQ9NUD9 493 aa16.35■□□□□ 0.21
VARS2-212ENST00000542001 PSMD3O43242 534 aa16.34■□□□□ 0.21
VARS2-212ENST00000542001 PBX3P40426 434 aa16.34■□□□□ 0.21
VARS2-212ENST00000542001 GALNT3Q14435 633 aa16.34■□□□□ 0.21
VARS2-212ENST00000542001 PSMD5Q16401 504 aa16.34■□□□□ 0.21
VARS2-212ENST00000542001 SLC26A9Q7LBE3 791 aa16.34■□□□□ 0.21
VARS2-212ENST00000542001 OR6K2Q8NGY2 324 aa16.34■□□□□ 0.21
VARS2-212ENST00000542001 SLCO2A1Q92959 643 aa16.34■□□□□ 0.21
VARS2-212ENST00000542001 LENG8Q96PV6 779 aaPredicted RBP16.34■□□□□ 0.21
VARS2-212ENST00000542001 ABCG8Q9H221 673 aa16.34■□□□□ 0.21
VARS2-212ENST00000542001 WDR41Q9HAD4 459 aa16.34■□□□□ 0.21
VARS2-212ENST00000542001 EGFL7Q9UHF1 273 aa16.34■□□□□ 0.21
VARS2-212ENST00000542001 CAPN8A6NHC0 703 aa16.34■□□□□ 0.21
VARS2-212ENST00000542001 MT-ND1P03886 318 aa16.34■□□□□ 0.21
VARS2-212ENST00000542001 RALGDSQ12967 914 aa16.34■□□□□ 0.21
VARS2-212ENST00000542001 POLD3Q15054 466 aaPredicted RBP16.34■□□□□ 0.21
VARS2-212ENST00000542001 ARL13AQ5H913 290 aaPredicted RBP16.34■□□□□ 0.21
VARS2-212ENST00000542001 ZBTB49Q6ZSB9 765 aa16.34■□□□□ 0.21
VARS2-212ENST00000542001 MILR1Q7Z6M3 343 aa16.34■□□□□ 0.21
VARS2-212ENST00000542001 LRRC52Q8N7C0 313 aa16.34■□□□□ 0.21
VARS2-212ENST00000542001 HIC2Q96JB3 615 aa16.34■□□□□ 0.21
VARS2-212ENST00000542001 C12orf42Q96LP6 360 aa16.34■□□□□ 0.21
VARS2-212ENST00000542001 TM6SF2Q9BZW4 377 aa16.34■□□□□ 0.21
VARS2-212ENST00000542001 ZMYM5Q9UJ78 669 aa16.34■□□□□ 0.21
VARS2-212ENST00000542001 LZTS1Q9Y250 596 aa16.34■□□□□ 0.21
VARS2-212ENST00000542001 EFR3BQ9Y2G0 817 aa16.34■□□□□ 0.21
VARS2-212ENST00000542001 DPPA5A6NC42 116 aa16.34■□□□□ 0.21
VARS2-212ENST00000542001 TRPC5OSA6NMA1 111 aa16.34■□□□□ 0.21
VARS2-212ENST00000542001 F5H5T6 163 aa16.34■□□□□ 0.21
VARS2-212ENST00000542001 TBX10O75333 385 aa16.34■□□□□ 0.21
VARS2-212ENST00000542001 ZNF23P17027 643 aa16.34■□□□□ 0.21
VARS2-212ENST00000542001 RECQLP46063 649 aaPredicted RBP16.34■□□□□ 0.21
VARS2-212ENST00000542001 CCDC153Q494R4 210 aa16.34■□□□□ 0.21
VARS2-212ENST00000542001 ATP6V0D2Q8N8Y2 350 aa16.34■□□□□ 0.21
VARS2-212ENST00000542001 SEMA3CQ99985 751 aa16.34■□□□□ 0.21
VARS2-212ENST00000542001 DCUN1D5Q9BTE7 237 aa16.34■□□□□ 0.21
VARS2-212ENST00000542001 MRASO14807 208 aa16.33■□□□□ 0.21
VARS2-212ENST00000542001 SIN3BO75182 1162 aa16.33■□□□□ 0.21
VARS2-212ENST00000542001 PAGE1O75459 146 aa16.33■□□□□ 0.21
VARS2-212ENST00000542001 CLPTM1O96005 669 aa16.33■□□□□ 0.21
VARS2-212ENST00000542001 TPBGLP0DKB5 382 aa16.33■□□□□ 0.21
VARS2-212ENST00000542001 EEF1DP29692 281 aaKnown RBP16.33■□□□□ 0.21
VARS2-212ENST00000542001 WNT3AP56704 352 aa16.33■□□□□ 0.21
VARS2-212ENST00000542001 KCNK10P57789 538 aa16.33■□□□□ 0.21
VARS2-212ENST00000542001 ARHGAP17Q68EM7 881 aa16.33■□□□□ 0.21
VARS2-212ENST00000542001 C15orf39Q6ZRI6 1047 aa16.33■□□□□ 0.21
VARS2-212ENST00000542001 NT5DC4Q86YG4 428 aa16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms