RNA–Protein interactions for RNA: ENST00000541953.5

CLSTN3-213, Transcript of calsyntenin 3, humanhuman

TSL 5

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-213ENST00000541953 OXR1Q8N573 874 aa15.86■□□□□ 0.13
CLSTN3-213ENST00000541953 DCBLD1Q8N8Z6 715 aa15.86■□□□□ 0.13
CLSTN3-213ENST00000541953 OR2A12Q8NGT7 310 aa15.86■□□□□ 0.13
CLSTN3-213ENST00000541953 SHC3Q92529 594 aa15.86■□□□□ 0.13
CLSTN3-213ENST00000541953 RNF34Q969K3 372 aa15.86■□□□□ 0.13
CLSTN3-213ENST00000541953 FCRL3Q96P31 734 aaPredicted RBP15.86■□□□□ 0.13
CLSTN3-213ENST00000541953 UBL7Q96S82 380 aaPredicted RBP15.86■□□□□ 0.13
CLSTN3-213ENST00000541953 TRIM62Q9BVG3 475 aa15.86■□□□□ 0.13
CLSTN3-213ENST00000541953 SIK2Q9H0K1 926 aa15.86■□□□□ 0.13
CLSTN3-213ENST00000541953 SIX2Q9NPC8 291 aa15.86■□□□□ 0.13
CLSTN3-213ENST00000541953 CLCA2Q9UQC9 943 aa15.86■□□□□ 0.13
CLSTN3-213ENST00000541953 DMTF1Q9Y222 760 aa15.86■□□□□ 0.13
CLSTN3-213ENST00000541953 HS3ST2Q9Y278 367 aa15.86■□□□□ 0.13
CLSTN3-213ENST00000541953 TBC1D30Q9Y2I9 924 aa15.86■□□□□ 0.13
CLSTN3-213ENST00000541953 ACTL7AQ9Y615 435 aa15.86■□□□□ 0.13
CLSTN3-213ENST00000541953 DOCK4Q8N1I0 1966 aa15.86■□□□□ 0.13
CLSTN3-213ENST00000541953 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.85■□□□□ 0.13
CLSTN3-213ENST00000541953 BICDL2A1A5D9 508 aa15.85■□□□□ 0.13
CLSTN3-213ENST00000541953 C1QTNF3-AMACRE9PGA6 284 aa15.85■□□□□ 0.13
CLSTN3-213ENST00000541953 PRAMEF26H0Y7S4 382 aa15.85■□□□□ 0.13
CLSTN3-213ENST00000541953 M0QYT0 321 aa15.85■□□□□ 0.13
CLSTN3-213ENST00000541953 ZNF821O75541 412 aaPredicted RBP15.85■□□□□ 0.13
CLSTN3-213ENST00000541953 CCDC173Q0VFZ6 552 aa15.85■□□□□ 0.13
CLSTN3-213ENST00000541953 ZNF177Q13360 481 aaPredicted RBP15.85■□□□□ 0.13
CLSTN3-213ENST00000541953 FGL2Q14314 439 aa15.85■□□□□ 0.13
CLSTN3-213ENST00000541953 ZNF542PQ5EBM4 170 aa15.85■□□□□ 0.13
CLSTN3-213ENST00000541953 FAM46CQ5VWP2 391 aa15.85■□□□□ 0.13
CLSTN3-213ENST00000541953 TMC6Q7Z403 805 aa15.85■□□□□ 0.13
CLSTN3-213ENST00000541953 DSG4Q86SJ6 1040 aa15.85■□□□□ 0.13
CLSTN3-213ENST00000541953 IRF2BP1Q8IU81 584 aa15.85■□□□□ 0.13
CLSTN3-213ENST00000541953 ELOA2Q8IYF1 753 aaPredicted RBP15.85■□□□□ 0.13
CLSTN3-213ENST00000541953 GRIN3AQ8TCU5 1115 aa15.85■□□□□ 0.13
CLSTN3-213ENST00000541953 SLC39A7Q92504 469 aa15.85■□□□□ 0.13
CLSTN3-213ENST00000541953 MUC3BQ9H195 1237 aa15.85■□□□□ 0.13
CLSTN3-213ENST00000541953 TNKS2Q9H2K2 1166 aa15.85■□□□□ 0.13
CLSTN3-213ENST00000541953 PREBQ9HCU5 417 aa15.85■□□□□ 0.13
CLSTN3-213ENST00000541953 ASNSD1Q9NWL6 643 aa15.85■□□□□ 0.13
CLSTN3-213ENST00000541953 MPP6Q9NZW5 540 aa15.85■□□□□ 0.13
CLSTN3-213ENST00000541953 APEX2Q9UBZ4 518 aa15.85■□□□□ 0.13
CLSTN3-213ENST00000541953 PCDHGC3Q9UN70 934 aa15.85■□□□□ 0.13
CLSTN3-213ENST00000541953 FLNBO75369 2602 aaKnown RBP15.85■□□□□ 0.13
CLSTN3-213ENST00000541953 EIF4E1BA6NMX2 242 aaKnown RBP15.84■□□□□ 0.13
CLSTN3-213ENST00000541953 KPNA3O00505 521 aaPredicted RBP15.84■□□□□ 0.13
CLSTN3-213ENST00000541953 ALOX15BO15296 676 aa15.84■□□□□ 0.13
CLSTN3-213ENST00000541953 NEBLO76041 1014 aa15.84■□□□□ 0.13
CLSTN3-213ENST00000541953 ENDOD1O94919 500 aa15.84■□□□□ 0.13
CLSTN3-213ENST00000541953 GLI1P08151 1106 aa15.84■□□□□ 0.13
CLSTN3-213ENST00000541953 SLC2A3P11169 496 aa15.84■□□□□ 0.13
CLSTN3-213ENST00000541953 ZNF18P17022 549 aa15.84■□□□□ 0.13
CLSTN3-213ENST00000541953 CHRNA3P32297 505 aa15.84■□□□□ 0.13
CLSTN3-213ENST00000541953 CLCN1P35523 988 aa15.84■□□□□ 0.13
CLSTN3-213ENST00000541953 TLE3Q04726 772 aa15.84■□□□□ 0.13
CLSTN3-213ENST00000541953 KCNMA1Q12791 1236 aa15.84■□□□□ 0.13
CLSTN3-213ENST00000541953 ZNF211Q13398 564 aaPredicted RBP15.84■□□□□ 0.13
CLSTN3-213ENST00000541953 ILKQ13418 452 aa15.84■□□□□ 0.13
CLSTN3-213ENST00000541953 EFHC1Q5JVL4 640 aa15.84■□□□□ 0.13
CLSTN3-213ENST00000541953 TPRG1LQ5T0D9 272 aa15.84■□□□□ 0.13
CLSTN3-213ENST00000541953 TRNP1Q6NT89 227 aa15.84■□□□□ 0.13
CLSTN3-213ENST00000541953 C11orf57Q6ZUT1 292 aaPredicted RBP15.84■□□□□ 0.13
CLSTN3-213ENST00000541953 SLC26A9Q7LBE3 791 aa15.84■□□□□ 0.13
CLSTN3-213ENST00000541953 TFAP2DQ7Z6R9 452 aa15.84■□□□□ 0.13
CLSTN3-213ENST00000541953 SLC47A2Q86VL8 602 aa15.84■□□□□ 0.13
CLSTN3-213ENST00000541953 SPACA3Q8IXA5 215 aa15.84■□□□□ 0.13
CLSTN3-213ENST00000541953 OR7D4Q8NG98 312 aa15.84■□□□□ 0.13
CLSTN3-213ENST00000541953 OR4C6Q8NH72 309 aa15.84■□□□□ 0.13
CLSTN3-213ENST00000541953 KLHDC7BQ96G42 594 aa15.84■□□□□ 0.13
CLSTN3-213ENST00000541953 NPY6RQ99463 290 aa15.84■□□□□ 0.13
CLSTN3-213ENST00000541953 CALN1Q9BXU9 219 aa15.84■□□□□ 0.13
CLSTN3-213ENST00000541953 TKTL2Q9H0I9 626 aa15.84■□□□□ 0.13
CLSTN3-213ENST00000541953 ZNF212Q9UDV6 495 aa15.84■□□□□ 0.13
CLSTN3-213ENST00000541953 SLC12A6Q9UHW9 1150 aa15.84■□□□□ 0.13
CLSTN3-213ENST00000541953 TPX2Q9ULW0 747 aaKnown RBP15.84■□□□□ 0.13
CLSTN3-213ENST00000541953 ATXN7O15265 892 aaPredicted RBP15.83■□□□□ 0.12
CLSTN3-213ENST00000541953 RAD51BO15315 384 aa15.83■□□□□ 0.12
CLSTN3-213ENST00000541953 CLDN11O75508 207 aa15.83■□□□□ 0.12
CLSTN3-213ENST00000541953 PIAS2O75928 621 aa15.83■□□□□ 0.12
CLSTN3-213ENST00000541953 GNA14O95837 355 aa15.83■□□□□ 0.12
CLSTN3-213ENST00000541953 MT-CO3P00414 261 aa15.83■□□□□ 0.12
CLSTN3-213ENST00000541953 RHOCP08134 193 aa15.83■□□□□ 0.12
CLSTN3-213ENST00000541953 CDK4P11802 303 aa15.83■□□□□ 0.12
CLSTN3-213ENST00000541953 PON1P27169 355 aa15.83■□□□□ 0.12
CLSTN3-213ENST00000541953 PPP1R2P41236 205 aa15.83■□□□□ 0.12
CLSTN3-213ENST00000541953 CDH4P55283 916 aa15.83■□□□□ 0.12
CLSTN3-213ENST00000541953 SLC6A3Q01959 620 aa15.83■□□□□ 0.12
CLSTN3-213ENST00000541953 OVGP1Q12889 678 aa15.83■□□□□ 0.12
CLSTN3-213ENST00000541953 TBC1D25Q3MII6 688 aa15.83■□□□□ 0.12
CLSTN3-213ENST00000541953 TMEM259Q4ZIN3 620 aa15.83■□□□□ 0.12
CLSTN3-213ENST00000541953 RAB6CQ53S08 254 aa15.83■□□□□ 0.12
CLSTN3-213ENST00000541953 C2CD6Q53TS8 623 aa15.83■□□□□ 0.12
CLSTN3-213ENST00000541953 CDCP2Q5VXM1 449 aa15.83■□□□□ 0.12
CLSTN3-213ENST00000541953 DPY19L2P1Q6NXN4 242 aa15.83■□□□□ 0.12
CLSTN3-213ENST00000541953 C22orf39Q6P5X5 142 aa15.83■□□□□ 0.12
CLSTN3-213ENST00000541953 ENOSF1Q7L5Y1 443 aa15.83■□□□□ 0.12
CLSTN3-213ENST00000541953 HORMAD1Q86X24 394 aa15.83■□□□□ 0.12
CLSTN3-213ENST00000541953 ATP11CQ8NB49 1132 aa15.83■□□□□ 0.12
CLSTN3-213ENST00000541953 VOPP1Q96AW1 172 aa15.83■□□□□ 0.12
CLSTN3-213ENST00000541953 NAF1Q96HR8 494 aaKnown RBP15.83■□□□□ 0.12
CLSTN3-213ENST00000541953 RAB6CQ9H0N0 254 aa15.83■□□□□ 0.12
CLSTN3-213ENST00000541953 KLHL11Q9NVR0 708 aa15.83■□□□□ 0.12
CLSTN3-213ENST00000541953 ARHGEF38Q9NXL2 777 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms