RNA–Protein interactions for RNA: ENST00000541025.2

TTR-203, Transcript of transthyretin, humanhuman

TSL 2

Gene TTR, Length 956 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTR-203ENST00000541025 BDP1A6H8Y1 2624 aa6.8□□□□□ -1.32
TTR-203ENST00000541025 SF3B1O75533 1304 aaKnown RBP eCLIP6.8□□□□□ -1.32
TTR-203ENST00000541025 MYO10Q9HD67 2058 aa6.8□□□□□ -1.32
TTR-203ENST00000541025 PVALEFA0A1B0GWK0 134 aa6.8□□□□□ -1.32
TTR-203ENST00000541025 GOLGA8IPA6NC78 632 aa6.8□□□□□ -1.32
TTR-203ENST00000541025 GOLGA8JA6NMD2 632 aa6.8□□□□□ -1.32
TTR-203ENST00000541025 TMEM189-UBE2V1I3L0A0 370 aa6.8□□□□□ -1.32
TTR-203ENST00000541025 PODXLO00592 558 aa6.8□□□□□ -1.32
TTR-203ENST00000541025 PPEF2O14830 753 aa6.8□□□□□ -1.32
TTR-203ENST00000541025 EIF3DO15371 548 aaKnown RBP eCLIP6.8□□□□□ -1.32
TTR-203ENST00000541025 TEX28O15482 410 aa6.8□□□□□ -1.32
TTR-203ENST00000541025 ADAM12O43184 909 aa6.8□□□□□ -1.32
TTR-203ENST00000541025 MBTPS2O43462 519 aa6.8□□□□□ -1.32
TTR-203ENST00000541025 TADA2AO75478 443 aa6.8□□□□□ -1.32
TTR-203ENST00000541025 B3GAT3O94766 335 aa6.8□□□□□ -1.32
TTR-203ENST00000541025 PCDH8O95206 1070 aa6.8□□□□□ -1.32
TTR-203ENST00000541025 RPN1P04843 607 aaKnown RBP6.8□□□□□ -1.32
TTR-203ENST00000541025 URODP06132 367 aa6.8□□□□□ -1.32
TTR-203ENST00000541025 LSP1P33241 339 aa6.8□□□□□ -1.32
TTR-203ENST00000541025 ABCD1P33897 745 aa6.8□□□□□ -1.32
TTR-203ENST00000541025 CLCN4P51793 760 aa6.8□□□□□ -1.32
TTR-203ENST00000541025 STK4Q13043 487 aa6.8□□□□□ -1.32
TTR-203ENST00000541025 ALCAMQ13740 583 aa6.8□□□□□ -1.32
TTR-203ENST00000541025 AAK1Q2M2I8 961 aa6.8□□□□□ -1.32
TTR-203ENST00000541025 FAM171A1Q5VUB5 890 aa6.8□□□□□ -1.32
TTR-203ENST00000541025 C1QL3Q5VWW1 255 aa6.8□□□□□ -1.32
TTR-203ENST00000541025 JADE1Q6IE81 842 aa6.8□□□□□ -1.32
TTR-203ENST00000541025 ANKRD54Q6NXT1 300 aa6.8□□□□□ -1.32
TTR-203ENST00000541025 TMEM184AQ6ZMB5 413 aa6.8□□□□□ -1.32
TTR-203ENST00000541025 KRBA2Q6ZNG9 492 aa6.8□□□□□ -1.32
TTR-203ENST00000541025 LHFPL2Q6ZUX7 228 aa6.8□□□□□ -1.32
TTR-203ENST00000541025 SYCP3Q8IZU3 236 aa6.8□□□□□ -1.32
TTR-203ENST00000541025 C12orf76Q8N812 135 aaPredicted RBP6.8□□□□□ -1.32
TTR-203ENST00000541025 ZNF610Q8N9Z0 462 aa6.8□□□□□ -1.32
TTR-203ENST00000541025 SMRP1Q8NCR6 262 aa6.8□□□□□ -1.32
TTR-203ENST00000541025 ENGASEQ8NFI3 743 aa6.8□□□□□ -1.32
TTR-203ENST00000541025 RIN2Q8WYP3 895 aaPredicted RBP6.8□□□□□ -1.32
TTR-203ENST00000541025 PPP2R3CQ969Q6 453 aa6.8□□□□□ -1.32
TTR-203ENST00000541025 KLHL5Q96PQ7 755 aa6.8□□□□□ -1.32
TTR-203ENST00000541025 CDCA3Q99618 268 aaPredicted RBP6.8□□□□□ -1.32
TTR-203ENST00000541025 PYM1Q9BRP8 204 aaKnown RBP6.8□□□□□ -1.32
TTR-203ENST00000541025 FAM213AQ9BRX8 229 aa6.8□□□□□ -1.32
TTR-203ENST00000541025 LRRC27Q9C0I9 530 aa6.8□□□□□ -1.32
TTR-203ENST00000541025 RPF1Q9H9Y2 349 aaKnown RBP6.8□□□□□ -1.32
TTR-203ENST00000541025 PLEKHA5Q9HAU0 1116 aa6.8□□□□□ -1.32
TTR-203ENST00000541025 MRPL17Q9NRX2 175 aaKnown RBP6.8□□□□□ -1.32
TTR-203ENST00000541025 ING3Q9NXR8 418 aa6.8□□□□□ -1.32
TTR-203ENST00000541025 USP25Q9UHP3 1055 aa6.8□□□□□ -1.32
TTR-203ENST00000541025 CD207Q9UJ71 328 aa6.8□□□□□ -1.32
TTR-203ENST00000541025 MYH10P35580 1976 aa6.8□□□□□ -1.32
TTR-203ENST00000541025 PTPRJQ12913 1337 aa6.79□□□□□ -1.32
TTR-203ENST00000541025 ZNF638Q14966 1978 aaKnown RBP6.79□□□□□ -1.32
TTR-203ENST00000541025 CLIC2O15247 247 aa6.79□□□□□ -1.32
TTR-203ENST00000541025 NCK2O43639 380 aa6.79□□□□□ -1.32
TTR-203ENST00000541025 NRP2O60462 931 aa6.79□□□□□ -1.32
TTR-203ENST00000541025 RAMP2O60895 175 aa6.79□□□□□ -1.32
TTR-203ENST00000541025 ALDH1A2O94788 518 aa6.79□□□□□ -1.32
TTR-203ENST00000541025 WEE2P0C1S8 567 aa6.79□□□□□ -1.32
TTR-203ENST00000541025 SPATA31D3P0C874 917 aa6.79□□□□□ -1.32
TTR-203ENST00000541025 XPAP23025 273 aaPredicted RBP6.79□□□□□ -1.32
TTR-203ENST00000541025 KLRC2P26717 231 aa6.79□□□□□ -1.32
TTR-203ENST00000541025 TKTP29401 623 aaKnown RBP6.79□□□□□ -1.32
TTR-203ENST00000541025 LRPAP1P30533 357 aa6.79□□□□□ -1.32
TTR-203ENST00000541025 ANP32AP39687 249 aaKnown RBP6.79□□□□□ -1.32
TTR-203ENST00000541025 CDKN1CP49918 316 aaPredicted RBP6.79□□□□□ -1.32
TTR-203ENST00000541025 CD69Q07108 199 aa6.79□□□□□ -1.32
TTR-203ENST00000541025 PNOCQ13519 176 aa6.79□□□□□ -1.32
TTR-203ENST00000541025 KYAT1Q16773 422 aa6.79□□□□□ -1.32
TTR-203ENST00000541025 BMT2Q1RMZ1 405 aa6.79□□□□□ -1.32
TTR-203ENST00000541025 USP41Q3LFD5 358 aa6.79□□□□□ -1.32
TTR-203ENST00000541025 SPATA1Q5VX52 437 aa6.79□□□□□ -1.32
TTR-203ENST00000541025 RNF219Q5W0B1 726 aaPredicted RBP6.79□□□□□ -1.32
TTR-203ENST00000541025 ARMCX5Q6P1M9 558 aa6.79□□□□□ -1.32
TTR-203ENST00000541025 DCLRE1AQ6PJP8 1040 aa6.79□□□□□ -1.32
TTR-203ENST00000541025 SPATA31D4Q6ZUB0 917 aa6.79□□□□□ -1.32
TTR-203ENST00000541025 MRGPREQ86SM8 312 aa6.79□□□□□ -1.32
TTR-203ENST00000541025 CEP57Q86XR8 500 aa6.79□□□□□ -1.32
TTR-203ENST00000541025 CBWD2Q8IUF1 395 aa6.79□□□□□ -1.32
TTR-203ENST00000541025 BRSK2Q8IWQ3 736 aa6.79□□□□□ -1.32
TTR-203ENST00000541025 LNX1Q8TBB1 728 aaPredicted RBP6.79□□□□□ -1.32
TTR-203ENST00000541025 NOC3LQ8WTT2 800 aaKnown RBP6.79□□□□□ -1.32
TTR-203ENST00000541025 RSAD2Q8WXG1 361 aa6.79□□□□□ -1.32
TTR-203ENST00000541025 UROC1Q96N76 676 aa6.79□□□□□ -1.32
TTR-203ENST00000541025 CLSTN3Q9BQT9 956 aa6.79□□□□□ -1.32
TTR-203ENST00000541025 TTPALQ9BTX7 342 aa6.79□□□□□ -1.32
TTR-203ENST00000541025 S1PR5Q9H228 398 aa6.79□□□□□ -1.32
TTR-203ENST00000541025 TMEM206Q9H813 350 aa6.79□□□□□ -1.32
TTR-203ENST00000541025 AGPAT3Q9NRZ7 376 aa6.79□□□□□ -1.32
TTR-203ENST00000541025 SLC38A7Q9NVC3 462 aa6.79□□□□□ -1.32
TTR-203ENST00000541025 UBQLN1Q9UMX0 589 aaKnown RBP6.79□□□□□ -1.32
TTR-203ENST00000541025 EXOC7Q9UPT5 735 aa6.79□□□□□ -1.32
TTR-203ENST00000541025 USP15Q9Y4E8 981 aaPredicted RBP6.79□□□□□ -1.32
TTR-203ENST00000541025 UBE4BO95155 1302 aa6.78□□□□□ -1.32
TTR-203ENST00000541025 ANAPC1Q9H1A4 1944 aa6.78□□□□□ -1.32
TTR-203ENST00000541025 ANO9A1A5B4 782 aa6.78□□□□□ -1.32
TTR-203ENST00000541025 PIRO00625 290 aa6.78□□□□□ -1.32
TTR-203ENST00000541025 EXTL3O43909 919 aa6.78□□□□□ -1.32
TTR-203ENST00000541025 FAM20BO75063 409 aa6.78□□□□□ -1.32
TTR-203ENST00000541025 RPL9P32969 192 aaKnown RBP6.78□□□□□ -1.32
TTR-203ENST00000541025 CYP2J2P51589 502 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms