RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 COL9A1P20849 921 aa15.82■□□□□ 0.12
DDB1-218ENST00000540784 HOXA6P31267 233 aa15.82■□□□□ 0.12
DDB1-218ENST00000540784 CDKN2BP42772 138 aa15.82■□□□□ 0.12
DDB1-218ENST00000540784 CLCN6P51797 869 aa15.82■□□□□ 0.12
DDB1-218ENST00000540784 COPS2P61201 443 aa15.82■□□□□ 0.12
DDB1-218ENST00000540784 CAMK2GQ13555 558 aaPredicted RBP15.82■□□□□ 0.12
DDB1-218ENST00000540784 TAZQ16635 292 aa15.82■□□□□ 0.12
DDB1-218ENST00000540784 TFDP3Q5H9I0 405 aa15.82■□□□□ 0.12
DDB1-218ENST00000540784 NCBP2-AS2Q69YL0 99 aa15.82■□□□□ 0.12
DDB1-218ENST00000540784 LEKR1Q6ZMV7 388 aa15.82■□□□□ 0.12
DDB1-218ENST00000540784 LRRC49Q8IUZ0 686 aa15.82■□□□□ 0.12
DDB1-218ENST00000540784 PGBD3Q8N328 593 aa15.82■□□□□ 0.12
DDB1-218ENST00000540784 TRIM58Q8NG06 486 aa15.82■□□□□ 0.12
DDB1-218ENST00000540784 HES6Q96HZ4 224 aa15.82■□□□□ 0.12
DDB1-218ENST00000540784 MTG2Q9H4K7 406 aa15.82■□□□□ 0.12
DDB1-218ENST00000540784 PRSS16Q9NQE7 514 aa15.82■□□□□ 0.12
DDB1-218ENST00000540784 IPO11Q9UI26 975 aaKnown RBP15.82■□□□□ 0.12
DDB1-218ENST00000540784 PACSIN2Q9UNF0 486 aaPredicted RBP15.82■□□□□ 0.12
DDB1-218ENST00000540784 DOCK4Q8N1I0 1966 aa15.82■□□□□ 0.12
DDB1-218ENST00000540784 ATG2BQ96BY7 2078 aa15.82■□□□□ 0.12
DDB1-218ENST00000540784 J3KR12 359 aa15.81■□□□□ 0.12
DDB1-218ENST00000540784 SMAD6O43541 496 aaKnown RBP15.81■□□□□ 0.12
DDB1-218ENST00000540784 PRAMEF11O60813 436 aa15.81■□□□□ 0.12
DDB1-218ENST00000540784 SP9P0CG40 484 aa15.81■□□□□ 0.12
DDB1-218ENST00000540784 KRT10P13645 584 aa15.81■□□□□ 0.12
DDB1-218ENST00000540784 PXNP49023 591 aaPredicted RBP15.81■□□□□ 0.12
DDB1-218ENST00000540784 SERPINH1P50454 418 aaKnown RBP15.81■□□□□ 0.12
DDB1-218ENST00000540784 IL10RBQ08334 325 aa15.81■□□□□ 0.12
DDB1-218ENST00000540784 LLGL1Q15334 1064 aa15.81■□□□□ 0.12
DDB1-218ENST00000540784 RPS6KA1Q15418 735 aa15.81■□□□□ 0.12
DDB1-218ENST00000540784 ZNF528Q3MIS6 628 aa15.81■□□□□ 0.12
DDB1-218ENST00000540784 INO80DQ53TQ3 878 aaPredicted RBP15.81■□□□□ 0.12
DDB1-218ENST00000540784 C9orf64Q5T6V5 341 aa15.81■□□□□ 0.12
DDB1-218ENST00000540784 KAZNQ674X7 775 aa15.81■□□□□ 0.12
DDB1-218ENST00000540784 HEATR6Q6AI08 1181 aaKnown RBP15.81■□□□□ 0.12
DDB1-218ENST00000540784 SLC9A4Q6AI14 798 aa15.81■□□□□ 0.12
DDB1-218ENST00000540784 METTL3Q86U44 580 aaKnown RBP15.81■□□□□ 0.12
DDB1-218ENST00000540784 TP53INP2Q8IXH6 220 aa15.81■□□□□ 0.12
DDB1-218ENST00000540784 PLD5Q8N7P1 536 aa15.81■□□□□ 0.12
DDB1-218ENST00000540784 FRS2Q8WU20 508 aa15.81■□□□□ 0.12
DDB1-218ENST00000540784 CASKIN2Q8WXE0 1202 aa15.81■□□□□ 0.12
DDB1-218ENST00000540784 PTPRN2Q92932 1015 aa15.81■□□□□ 0.12
DDB1-218ENST00000540784 FAM126AQ9BYI3 521 aaPredicted RBP15.81■□□□□ 0.12
DDB1-218ENST00000540784 SP110Q9HB58 689 aa15.81■□□□□ 0.12
DDB1-218ENST00000540784 BCCIPQ9P287 314 aaKnown RBP eCLIP15.81■□□□□ 0.12
DDB1-218ENST00000540784 EBF1Q9UH73 591 aa15.81■□□□□ 0.12
DDB1-218ENST00000540784 PYCARDQ9ULZ3 195 aa15.81■□□□□ 0.12
DDB1-218ENST00000540784 FARP1Q9Y4F1 1045 aaPredicted RBP15.81■□□□□ 0.12
DDB1-218ENST00000540784 HEY1Q9Y5J3 304 aa15.81■□□□□ 0.12
DDB1-218ENST00000540784 ZDBF2Q9HCK1 2354 aa15.8■□□□□ 0.12
DDB1-218ENST00000540784 DDX3YO15523 660 aaKnown RBP15.8■□□□□ 0.12
DDB1-218ENST00000540784 CST8O60676 142 aa15.8■□□□□ 0.12
DDB1-218ENST00000540784 SIN3BO75182 1162 aa15.8■□□□□ 0.12
DDB1-218ENST00000540784 CD160O95971 181 aa15.8■□□□□ 0.12
DDB1-218ENST00000540784 PYGMP11217 842 aa15.8■□□□□ 0.12
DDB1-218ENST00000540784 MX2P20592 715 aa15.8■□□□□ 0.12
DDB1-218ENST00000540784 DNA2P51530 1060 aa15.8■□□□□ 0.12
DDB1-218ENST00000540784 DYNLT1P63172 113 aa15.8■□□□□ 0.12
DDB1-218ENST00000540784 GBE1Q04446 702 aa15.8■□□□□ 0.12
DDB1-218ENST00000540784 MEI1Q5TIA1 1274 aa15.8■□□□□ 0.12
DDB1-218ENST00000540784 ANO7Q6IWH7 933 aa15.8■□□□□ 0.12
DDB1-218ENST00000540784 ARHGAP36Q6ZRI8 547 aa15.8■□□□□ 0.12
DDB1-218ENST00000540784 TMPRSS6Q8IU80 811 aa15.8■□□□□ 0.12
DDB1-218ENST00000540784 OR2T3Q8NH03 318 aa15.8■□□□□ 0.12
DDB1-218ENST00000540784 HMGB4Q8WW32 186 aa15.8■□□□□ 0.12
DDB1-218ENST00000540784 ALG3Q92685 438 aa15.8■□□□□ 0.12
DDB1-218ENST00000540784 ISG20Q96AZ6 181 aaKnown RBP15.8■□□□□ 0.12
DDB1-218ENST00000540784 HEMGNQ9BXL5 484 aa15.8■□□□□ 0.12
DDB1-218ENST00000540784 CEP44Q9C0F1 390 aa15.8■□□□□ 0.12
DDB1-218ENST00000540784 KCNH6Q9H252 994 aa15.8■□□□□ 0.12
DDB1-218ENST00000540784 FBRSQ9HAH7 460 aa15.8■□□□□ 0.12
DDB1-218ENST00000540784 CD248Q9HCU0 757 aa15.8■□□□□ 0.12
DDB1-218ENST00000540784 UBA2Q9UBT2 640 aaPredicted RBP15.8■□□□□ 0.12
DDB1-218ENST00000540784 EFR3BQ9Y2G0 817 aa15.8■□□□□ 0.12
DDB1-218ENST00000540784 ACTL7AQ9Y615 435 aa15.8■□□□□ 0.12
DDB1-218ENST00000540784 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.8■□□□□ 0.12
DDB1-218ENST00000540784 hCG_1818297A0A087WSY0 165 aa15.79■□□□□ 0.12
DDB1-218ENST00000540784 CCDC163A0A0D9SF12 145 aa15.79■□□□□ 0.12
DDB1-218ENST00000540784 GOLGA6L9A6NEM1 432 aa15.79■□□□□ 0.12
DDB1-218ENST00000540784 H0Y858 1186 aa15.79■□□□□ 0.12
DDB1-218ENST00000540784 AXIN1O15169 862 aa15.79■□□□□ 0.12
DDB1-218ENST00000540784 MFSD11O43934 449 aa15.79■□□□□ 0.12
DDB1-218ENST00000540784 BNIP3LO60238 219 aa15.79■□□□□ 0.12
DDB1-218ENST00000540784 KIF5CO60282 957 aa15.79■□□□□ 0.12
DDB1-218ENST00000540784 RNASEH1O60930 286 aaKnown RBP15.79■□□□□ 0.12
DDB1-218ENST00000540784 TDGF1P13385 188 aa15.79■□□□□ 0.12
DDB1-218ENST00000540784 VAV1P15498 845 aa15.79■□□□□ 0.12
DDB1-218ENST00000540784 GABRG2P18507 467 aa15.79■□□□□ 0.12
DDB1-218ENST00000540784 RECQLP46063 649 aaPredicted RBP15.79■□□□□ 0.12
DDB1-218ENST00000540784 NR2C2P49116 596 aa15.79■□□□□ 0.12
DDB1-218ENST00000540784 FNTBP49356 437 aa15.79■□□□□ 0.12
DDB1-218ENST00000540784 DMWDQ09019 674 aa15.79■□□□□ 0.12
DDB1-218ENST00000540784 GALNT2Q10471 571 aa15.79■□□□□ 0.12
DDB1-218ENST00000540784 SLC10A2Q12908 348 aaPredicted RBP15.79■□□□□ 0.12
DDB1-218ENST00000540784 CYTH1Q15438 398 aa15.79■□□□□ 0.12
DDB1-218ENST00000540784 PPP2R5EQ16537 467 aa15.79■□□□□ 0.12
DDB1-218ENST00000540784 BZW1Q7L1Q6 419 aaKnown RBP15.79■□□□□ 0.12
DDB1-218ENST00000540784 STK40Q8N2I9 435 aa15.79■□□□□ 0.12
DDB1-218ENST00000540784 ATPAF2Q8N5M1 289 aa15.79■□□□□ 0.12
DDB1-218ENST00000540784 PCDH20Q8N6Y1 951 aaKnown RBP15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms