RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 DUSP16Q9BY84 665 aa12.51□□□□□ -0.41
NPC1-202ENST00000540608 IARS2Q9NSE4 1012 aaKnown RBP12.51□□□□□ -0.41
NPC1-202ENST00000540608 UBAP1Q9NZ09 502 aa12.51□□□□□ -0.41
NPC1-202ENST00000540608 TLK1Q9UKI8 766 aa12.51□□□□□ -0.41
NPC1-202ENST00000540608 UBQLN1Q9UMX0 589 aaKnown RBP12.51□□□□□ -0.41
NPC1-202ENST00000540608 RALGAPA2Q2PPJ7 1873 aa12.51□□□□□ -0.41
NPC1-202ENST00000540608 PIGNO95427 931 aa12.51□□□□□ -0.41
NPC1-202ENST00000540608 CD4P01730 458 aa12.51□□□□□ -0.41
NPC1-202ENST00000540608 ERCC2P18074 760 aa12.51□□□□□ -0.41
NPC1-202ENST00000540608 XRCC1P18887 633 aaPredicted RBP12.51□□□□□ -0.41
NPC1-202ENST00000540608 GJA5P36382 358 aa12.51□□□□□ -0.41
NPC1-202ENST00000540608 NME3Q13232 169 aa12.51□□□□□ -0.41
NPC1-202ENST00000540608 HERC3Q15034 1050 aa12.51□□□□□ -0.41
NPC1-202ENST00000540608 GRIK4Q16099 956 aa12.51□□□□□ -0.41
NPC1-202ENST00000540608 ZNF792Q3KQV3 632 aa12.51□□□□□ -0.41
NPC1-202ENST00000540608 SYPL2Q5VXT5 272 aa12.51□□□□□ -0.41
NPC1-202ENST00000540608 FASTKD5Q7L8L6 764 aaKnown RBP12.51□□□□□ -0.41
NPC1-202ENST00000540608 LIMS2Q7Z4I7 341 aa12.51□□□□□ -0.41
NPC1-202ENST00000540608 TICAM1Q8IUC6 712 aa12.51□□□□□ -0.41
NPC1-202ENST00000540608 PGAM4Q8N0Y7 254 aa12.51□□□□□ -0.41
NPC1-202ENST00000540608 APPL2Q8NEU8 664 aa12.51□□□□□ -0.41
NPC1-202ENST00000540608 MOCOSQ96EN8 888 aa12.51□□□□□ -0.41
NPC1-202ENST00000540608 SLC2A13Q96QE2 648 aa12.51□□□□□ -0.41
NPC1-202ENST00000540608 SLC9A7Q96T83 725 aa12.51□□□□□ -0.41
NPC1-202ENST00000540608 HNRNPABQ99729 332 aaKnown RBP12.51□□□□□ -0.41
NPC1-202ENST00000540608 EPAS1Q99814 870 aa12.51□□□□□ -0.41
NPC1-202ENST00000540608 GBA3Q9H227 469 aa12.51□□□□□ -0.41
NPC1-202ENST00000540608 TASP1Q9H6P5 420 aa12.51□□□□□ -0.41
NPC1-202ENST00000540608 CHRAC1Q9NRG0 131 aa12.51□□□□□ -0.41
NPC1-202ENST00000540608 PIGVQ9NUD9 493 aa12.51□□□□□ -0.41
NPC1-202ENST00000540608 ZDHHC2Q9UIJ5 367 aa12.51□□□□□ -0.41
NPC1-202ENST00000540608 RIMS3Q9UJD0 308 aa12.51□□□□□ -0.41
NPC1-202ENST00000540608 SLC39A10Q9ULF5 831 aa12.51□□□□□ -0.41
NPC1-202ENST00000540608 ZNF638Q14966 1978 aaKnown RBP12.51□□□□□ -0.41
NPC1-202ENST00000540608 OR6B1O95007 311 aa12.5□□□□□ -0.41
NPC1-202ENST00000540608 PGM3O95394 542 aa12.5□□□□□ -0.41
NPC1-202ENST00000540608 CRTAMO95727 393 aa12.5□□□□□ -0.41
NPC1-202ENST00000540608 CAPNS1P04632 268 aa12.5□□□□□ -0.41
NPC1-202ENST00000540608 TFAP2AP05549 437 aa12.5□□□□□ -0.41
NPC1-202ENST00000540608 SBK3P0C264 359 aa12.5□□□□□ -0.41
NPC1-202ENST00000540608 CD68P34810 354 aaPredicted RBP12.5□□□□□ -0.41
NPC1-202ENST00000540608 ADRA1BP35368 520 aa12.5□□□□□ -0.41
NPC1-202ENST00000540608 GRM3Q14832 879 aa12.5□□□□□ -0.41
NPC1-202ENST00000540608 ARHGAP22Q7Z5H3 698 aa12.5□□□□□ -0.41
NPC1-202ENST00000540608 LCA5Q86VQ0 697 aa12.5□□□□□ -0.41
NPC1-202ENST00000540608 PPP1R13LQ8WUF5 828 aa12.5□□□□□ -0.41
NPC1-202ENST00000540608 RCN3Q96D15 328 aa12.5□□□□□ -0.41
NPC1-202ENST00000540608 TNIP3Q96KP6 325 aa12.5□□□□□ -0.41
NPC1-202ENST00000540608 PPP1R36Q96LQ0 422 aa12.5□□□□□ -0.41
NPC1-202ENST00000540608 GPR22Q99680 433 aa12.5□□□□□ -0.41
NPC1-202ENST00000540608 MLPHQ9BV36 600 aaPredicted RBP12.5□□□□□ -0.41
NPC1-202ENST00000540608 NUF2Q9BZD4 464 aa12.5□□□□□ -0.41
NPC1-202ENST00000540608 BRD8Q9H0E9 1235 aa12.5□□□□□ -0.41
NPC1-202ENST00000540608 PLK2Q9NYY3 685 aa12.5□□□□□ -0.41
NPC1-202ENST00000540608 CLIC5Q9NZA1 410 aa12.5□□□□□ -0.41
NPC1-202ENST00000540608 TRHDEQ9UKU6 1024 aa12.5□□□□□ -0.41
NPC1-202ENST00000540608 FAM72CH0Y354 149 aa12.5□□□□□ -0.41
NPC1-202ENST00000540608 MTSS1O43312 755 aa12.5□□□□□ -0.41
NPC1-202ENST00000540608 TADA2AO75478 443 aa12.5□□□□□ -0.41
NPC1-202ENST00000540608 DDHD2O94830 711 aa12.5□□□□□ -0.41
NPC1-202ENST00000540608 CLPTM1O96005 669 aa12.5□□□□□ -0.41
NPC1-202ENST00000540608 ME2P23368 584 aa12.5□□□□□ -0.41
NPC1-202ENST00000540608 RGS2P41220 211 aa12.5□□□□□ -0.41
NPC1-202ENST00000540608 HCAR3P49019 387 aa12.5□□□□□ -0.41
NPC1-202ENST00000540608 AIF1P55008 147 aa12.5□□□□□ -0.41
NPC1-202ENST00000540608 MRPS22P82650 360 aaKnown RBP12.5□□□□□ -0.41
NPC1-202ENST00000540608 MS4A2Q01362 244 aa12.5□□□□□ -0.41
NPC1-202ENST00000540608 CEACAM7Q14002 265 aa12.5□□□□□ -0.41
NPC1-202ENST00000540608 MAP7Q14244 749 aa12.5□□□□□ -0.41
NPC1-202ENST00000540608 FAM72AQ5TYM5 149 aa12.5□□□□□ -0.41
NPC1-202ENST00000540608 FAM72DQ6L9T8 149 aa12.5□□□□□ -0.41
NPC1-202ENST00000540608 FAM72BQ86X60 149 aa12.5□□□□□ -0.41
NPC1-202ENST00000540608 SHCBP1Q8NEM2 672 aa12.5□□□□□ -0.41
NPC1-202ENST00000540608 KCTD13Q8WZ19 329 aa12.5□□□□□ -0.41
NPC1-202ENST00000540608 DLG3Q92796 817 aa12.5□□□□□ -0.41
NPC1-202ENST00000540608 EMID1Q96A84 441 aaPredicted RBP12.5□□□□□ -0.41
NPC1-202ENST00000540608 TSNARE1Q96NA8 513 aa12.5□□□□□ -0.41
NPC1-202ENST00000540608 ADAMTS10Q9H324 1103 aa12.5□□□□□ -0.41
NPC1-202ENST00000540608 EFCAB1Q9HAE3 211 aa12.5□□□□□ -0.41
NPC1-202ENST00000540608 NSMCE4AQ9NXX6 385 aa12.5□□□□□ -0.41
NPC1-202ENST00000540608 G3BP2Q9UN86 482 aaKnown RBP12.5□□□□□ -0.41
NPC1-202ENST00000540608 CDYLQ9Y232 598 aa12.5□□□□□ -0.41
NPC1-202ENST00000540608 LZTS1Q9Y250 596 aa12.5□□□□□ -0.41
NPC1-202ENST00000540608 TK2O00142 265 aa12.49□□□□□ -0.41
NPC1-202ENST00000540608 VILLO15195 856 aa12.49□□□□□ -0.41
NPC1-202ENST00000540608 AMHP03971 560 aa12.49□□□□□ -0.41
NPC1-202ENST00000540608 DNAJB1P25685 340 aa12.49□□□□□ -0.41
NPC1-202ENST00000540608 PNPLA4P41247 253 aa12.49□□□□□ -0.41
NPC1-202ENST00000540608 CCR10P46092 362 aa12.49□□□□□ -0.41
NPC1-202ENST00000540608 NDUFV1P49821 464 aa12.49□□□□□ -0.41
NPC1-202ENST00000540608 NAGLUP54802 743 aa12.49□□□□□ -0.41
NPC1-202ENST00000540608 NSUN2Q08J23 767 aaKnown RBP eCLIP12.49□□□□□ -0.41
NPC1-202ENST00000540608 SEMA3BQ13214 749 aa12.49□□□□□ -0.41
NPC1-202ENST00000540608 RFTN1Q14699 578 aaPredicted RBP12.49□□□□□ -0.41
NPC1-202ENST00000540608 ITPRIPL1Q6GPH6 555 aa12.49□□□□□ -0.41
NPC1-202ENST00000540608 CATSPER4Q7RTX7 472 aa12.49□□□□□ -0.41
NPC1-202ENST00000540608 AHI1Q8N157 1196 aa12.49□□□□□ -0.41
NPC1-202ENST00000540608 B3GALNT2Q8NCR0 500 aa12.49□□□□□ -0.41
NPC1-202ENST00000540608 NTAN1Q96AB6 310 aa12.49□□□□□ -0.41
NPC1-202ENST00000540608 NMD3Q96D46 503 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms