RNA–Protein interactions for RNA: ENST00000540086.5

CDH19-203, Transcript of cadherin 19, humanhuman

TSL 2 BASIC

Gene CDH19, Length 1,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-203ENST00000540086 USP4Q13107 963 aa7.04□□□□□ -1.28
CDH19-203ENST00000540086 CDH18Q13634 790 aa7.04□□□□□ -1.28
CDH19-203ENST00000540086 ZNF77Q15935 545 aa7.04□□□□□ -1.28
CDH19-203ENST00000540086 ANO4Q32M45 955 aa7.04□□□□□ -1.28
CDH19-203ENST00000540086 PPP1R21Q6ZMI0 780 aa7.04□□□□□ -1.28
CDH19-203ENST00000540086 MTERF4Q7Z6M4 381 aaKnown RBP7.04□□□□□ -1.28
CDH19-203ENST00000540086 SETD3Q86TU7 594 aaPredicted RBP7.04□□□□□ -1.28
CDH19-203ENST00000540086 CAND1Q86VP6 1230 aaKnown RBP7.04□□□□□ -1.28
CDH19-203ENST00000540086 IGDCC3Q8IVU1 814 aa7.04□□□□□ -1.28
CDH19-203ENST00000540086 ARID3BQ8IVW6 561 aaPredicted RBP7.04□□□□□ -1.28
CDH19-203ENST00000540086 MFN1Q8IWA4 741 aa7.04□□□□□ -1.28
CDH19-203ENST00000540086 AGGF1Q8N302 714 aaeCLIP7.04□□□□□ -1.28
CDH19-203ENST00000540086 EFHBQ8N7U6 833 aa7.04□□□□□ -1.28
CDH19-203ENST00000540086 ST13P5Q8NFI4 369 aaPredicted RBP7.04□□□□□ -1.28
CDH19-203ENST00000540086 SPATA22Q8NHS9 363 aa7.04□□□□□ -1.28
CDH19-203ENST00000540086 OXNAD1Q96HP4 312 aaPredicted RBP7.04□□□□□ -1.28
CDH19-203ENST00000540086 RUFY1Q96T51 708 aa7.04□□□□□ -1.28
CDH19-203ENST00000540086 MLPHQ9BV36 600 aaPredicted RBP7.04□□□□□ -1.28
CDH19-203ENST00000540086 MUC3BQ9H195 1237 aa7.04□□□□□ -1.28
CDH19-203ENST00000540086 MAGEH1Q9H213 219 aa7.04□□□□□ -1.28
CDH19-203ENST00000540086 LINC00597Q9H2U6 94 aa7.04□□□□□ -1.28
CDH19-203ENST00000540086 PRO3102Q9H379 93 aa7.04□□□□□ -1.28
CDH19-203ENST00000540086 RETREG1Q9H6L5 497 aa7.04□□□□□ -1.28
CDH19-203ENST00000540086 GLOD4Q9HC38 313 aa7.04□□□□□ -1.28
CDH19-203ENST00000540086 ATP13A1Q9HD20 1204 aa7.04□□□□□ -1.28
CDH19-203ENST00000540086 NT5MQ9NPB1 228 aa7.04□□□□□ -1.28
CDH19-203ENST00000540086 CLEC4EQ9ULY5 219 aa7.04□□□□□ -1.28
CDH19-203ENST00000540086 NFS1Q9Y697 457 aa7.04□□□□□ -1.28
CDH19-203ENST00000540086 TTC24A2A3L6 582 aaPredicted RBP7.03□□□□□ -1.28
CDH19-203ENST00000540086 SOBPA7XYQ1 873 aa7.03□□□□□ -1.28
CDH19-203ENST00000540086 E7ESA3 106 aa7.03□□□□□ -1.28
CDH19-203ENST00000540086 CBX4O00257 560 aa7.03□□□□□ -1.28
CDH19-203ENST00000540086 ALOX15BO15296 676 aa7.03□□□□□ -1.28
CDH19-203ENST00000540086 SNAP91O60641 907 aa7.03□□□□□ -1.28
CDH19-203ENST00000540086 USP12O75317 370 aa7.03□□□□□ -1.28
CDH19-203ENST00000540086 LUC7L3O95232 432 aaKnown RBP7.03□□□□□ -1.28
CDH19-203ENST00000540086 PAPLNO95428 1278 aa7.03□□□□□ -1.28
CDH19-203ENST00000540086 MT-CYBP00156 380 aaPredicted RBP7.03□□□□□ -1.28
CDH19-203ENST00000540086 FSHRP23945 695 aa7.03□□□□□ -1.28
CDH19-203ENST00000540086 MZF1P28698 734 aaPredicted RBP7.03□□□□□ -1.28
CDH19-203ENST00000540086 VIPR2P41587 438 aa7.03□□□□□ -1.28
CDH19-203ENST00000540086 ELK3P41970 407 aa7.03□□□□□ -1.28
CDH19-203ENST00000540086 MMP13P45452 471 aa7.03□□□□□ -1.28
CDH19-203ENST00000540086 RENBPP51606 427 aa7.03□□□□□ -1.28
CDH19-203ENST00000540086 OXCT1P55809 520 aa7.03□□□□□ -1.28
CDH19-203ENST00000540086 MAXP61244 160 aa7.03□□□□□ -1.28
CDH19-203ENST00000540086 ZNF844Q08AG5 666 aa7.03□□□□□ -1.28
CDH19-203ENST00000540086 IFFO1Q0D2I5 559 aa7.03□□□□□ -1.28
CDH19-203ENST00000540086 HNRNPDQ14103 355 aaKnown RBP7.03□□□□□ -1.28
CDH19-203ENST00000540086 LBRQ14739 615 aaKnown RBP7.03□□□□□ -1.28
CDH19-203ENST00000540086 MPPE1Q53F39 396 aa7.03□□□□□ -1.28
CDH19-203ENST00000540086 SPDYCQ5MJ68 293 aa7.03□□□□□ -1.28
CDH19-203ENST00000540086 CEP85LQ5SZL2 805 aa7.03□□□□□ -1.28
CDH19-203ENST00000540086 TMCO4Q5TGY1 634 aa7.03□□□□□ -1.28
CDH19-203ENST00000540086 MARC1Q5VT66 337 aa7.03□□□□□ -1.28
CDH19-203ENST00000540086 ANKRD54Q6NXT1 300 aa7.03□□□□□ -1.28
CDH19-203ENST00000540086 SYCE2Q6PIF2 218 aa7.03□□□□□ -1.28
CDH19-203ENST00000540086 CEP128Q6ZU80 1094 aa7.03□□□□□ -1.28
CDH19-203ENST00000540086 GET4Q7L5D6 327 aaPredicted RBP7.03□□□□□ -1.28
CDH19-203ENST00000540086 GPR149Q86SP6 731 aa7.03□□□□□ -1.28
CDH19-203ENST00000540086 TMEM25Q86YD3 366 aa7.03□□□□□ -1.28
CDH19-203ENST00000540086 RELL1Q8IUW5 271 aa7.03□□□□□ -1.28
CDH19-203ENST00000540086 NPAS3Q8IXF0 933 aa7.03□□□□□ -1.28
CDH19-203ENST00000540086 CPXM2Q8N436 756 aa7.03□□□□□ -1.28
CDH19-203ENST00000540086 MCUQ8NE86 351 aa7.03□□□□□ -1.28
CDH19-203ENST00000540086 FBXO36Q8NEA4 188 aa7.03□□□□□ -1.28
CDH19-203ENST00000540086 NSMCE1Q8WV22 266 aa7.03□□□□□ -1.28
CDH19-203ENST00000540086 RSPRY1Q96DX4 576 aa7.03□□□□□ -1.28
CDH19-203ENST00000540086 LRRC3BQ96PB8 259 aa7.03□□□□□ -1.28
CDH19-203ENST00000540086 APOL2Q9BQE5 337 aa7.03□□□□□ -1.28
CDH19-203ENST00000540086 PDFQ9HBH1 243 aa7.03□□□□□ -1.28
CDH19-203ENST00000540086 EIF2B3Q9NR50 452 aaKnown RBP7.03□□□□□ -1.28
CDH19-203ENST00000540086 CHMP2BQ9UQN3 213 aa7.03□□□□□ -1.28
CDH19-203ENST00000540086 WNT6Q9Y6F9 365 aa7.03□□□□□ -1.28
CDH19-203ENST00000540086 GBF1Q92538 1859 aa7.03□□□□□ -1.28
CDH19-203ENST00000540086 PDE4DIPQ5VU43 2346 aa7.03□□□□□ -1.28
CDH19-203ENST00000540086 SMIM23A6NLE4 172 aa7.02□□□□□ -1.29
CDH19-203ENST00000540086 MUSKO15146 869 aa7.02□□□□□ -1.29
CDH19-203ENST00000540086 EIF3HO15372 352 aaKnown RBP eCLIP7.02□□□□□ -1.29
CDH19-203ENST00000540086 KDELR3O43731 214 aa7.02□□□□□ -1.29
CDH19-203ENST00000540086 GJB3O75712 270 aa7.02□□□□□ -1.29
CDH19-203ENST00000540086 AP2A1O95782 977 aa7.02□□□□□ -1.29
CDH19-203ENST00000540086 SYF2O95926 243 aaKnown RBP7.02□□□□□ -1.29
CDH19-203ENST00000540086 NUDT17P0C025 328 aa7.02□□□□□ -1.29
CDH19-203ENST00000540086 CSKP41240 450 aa7.02□□□□□ -1.29
CDH19-203ENST00000540086 SESN2P58004 480 aaPredicted RBP7.02□□□□□ -1.29
CDH19-203ENST00000540086 GPX6P59796 221 aa7.02□□□□□ -1.29
CDH19-203ENST00000540086 CDK16Q00536 496 aa7.02□□□□□ -1.29
CDH19-203ENST00000540086 DSC2Q02487 901 aa7.02□□□□□ -1.29
CDH19-203ENST00000540086 ITKQ08881 620 aa7.02□□□□□ -1.29
CDH19-203ENST00000540086 PRPSAP1Q14558 356 aa7.02□□□□□ -1.29
CDH19-203ENST00000540086 ZNF235Q14590 738 aa7.02□□□□□ -1.29
CDH19-203ENST00000540086 DNAJC21Q5F1R6 531 aaKnown RBP7.02□□□□□ -1.29
CDH19-203ENST00000540086 FAM78AQ5JUQ0 283 aa7.02□□□□□ -1.29
CDH19-203ENST00000540086 FYB2Q5VWT5 728 aa7.02□□□□□ -1.29
CDH19-203ENST00000540086 KCTD11Q693B1 232 aa7.02□□□□□ -1.29
CDH19-203ENST00000540086 LRIG3Q6UXM1 1119 aa7.02□□□□□ -1.29
CDH19-203ENST00000540086 LINGO4Q6UY18 593 aa7.02□□□□□ -1.29
CDH19-203ENST00000540086 TMEM184AQ6ZMB5 413 aa7.02□□□□□ -1.29
CDH19-203ENST00000540086 EP400NLQ6ZTU2 488 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms