RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 PTGIRP43119 386 aa19.3■□□□□ 0.68
TNFRSF1A-213ENST00000540022 ARF5P84085 180 aa19.3■□□□□ 0.68
TNFRSF1A-213ENST00000540022 TMEM215Q68D42 235 aa19.3■□□□□ 0.68
TNFRSF1A-213ENST00000540022 GRAMD4Q6IC98 578 aa19.3■□□□□ 0.68
TNFRSF1A-213ENST00000540022 TIGD7Q6NT04 549 aaPredicted RBP19.3■□□□□ 0.68
TNFRSF1A-213ENST00000540022 PRUNE1Q86TP1 453 aa19.3■□□□□ 0.68
TNFRSF1A-213ENST00000540022 ALLCQ8N6M5 410 aa19.3■□□□□ 0.68
TNFRSF1A-213ENST00000540022 DNASE1L2Q92874 299 aa19.3■□□□□ 0.68
TNFRSF1A-213ENST00000540022 HEBP1Q9NRV9 189 aa19.3■□□□□ 0.68
TNFRSF1A-213ENST00000540022 HPCAL4Q9UM19 191 aa19.3■□□□□ 0.68
TNFRSF1A-213ENST00000540022 CFAP69A5D8W1 941 aa19.3■□□□□ 0.68
TNFRSF1A-213ENST00000540022 SGK1O00141 431 aa19.3■□□□□ 0.68
TNFRSF1A-213ENST00000540022 CD160O95971 181 aa19.3■□□□□ 0.68
TNFRSF1A-213ENST00000540022 STIP1P31948 543 aaKnown RBP19.3■□□□□ 0.68
TNFRSF1A-213ENST00000540022 EIF2DP41214 584 aaKnown RBP19.3■□□□□ 0.68
TNFRSF1A-213ENST00000540022 CLCN6P51797 869 aa19.3■□□□□ 0.68
TNFRSF1A-213ENST00000540022 KDSRQ06136 332 aa19.3■□□□□ 0.68
TNFRSF1A-213ENST00000540022 WASHC5Q12768 1159 aa19.3■□□□□ 0.68
TNFRSF1A-213ENST00000540022 DMC1Q14565 340 aa19.3■□□□□ 0.68
TNFRSF1A-213ENST00000540022 AHI1Q8N157 1196 aa19.3■□□□□ 0.68
TNFRSF1A-213ENST00000540022 GLIS1Q8NBF1 620 aa19.3■□□□□ 0.68
TNFRSF1A-213ENST00000540022 MAML1Q92585 1016 aa19.3■□□□□ 0.68
TNFRSF1A-213ENST00000540022 SLCO2A1Q92959 643 aa19.3■□□□□ 0.68
TNFRSF1A-213ENST00000540022 C2orf49Q9BVC5 232 aaPredicted RBP19.3■□□□□ 0.68
TNFRSF1A-213ENST00000540022 SEPT10Q9P0V9 454 aa19.3■□□□□ 0.68
TNFRSF1A-213ENST00000540022 RAD51CO43502 376 aa19.29■□□□□ 0.68
TNFRSF1A-213ENST00000540022 ECEL1O95672 775 aa19.29■□□□□ 0.68
TNFRSF1A-213ENST00000540022 PDGFBP01127 241 aaPredicted RBP19.29■□□□□ 0.68
TNFRSF1A-213ENST00000540022 IFNB1P01574 187 aa19.29■□□□□ 0.68
TNFRSF1A-213ENST00000540022 ETS1P14921 441 aa19.29■□□□□ 0.68
TNFRSF1A-213ENST00000540022 PTPN3P26045 913 aa19.29■□□□□ 0.68
TNFRSF1A-213ENST00000540022 CTSOP43234 321 aaPredicted RBP19.29■□□□□ 0.68
TNFRSF1A-213ENST00000540022 DR1Q01658 176 aa19.29■□□□□ 0.68
TNFRSF1A-213ENST00000540022 LMNB2Q03252 620 aa19.29■□□□□ 0.68
TNFRSF1A-213ENST00000540022 ZBTB17Q13105 803 aa19.29■□□□□ 0.68
TNFRSF1A-213ENST00000540022 MBLAC2Q68D91 279 aa19.29■□□□□ 0.68
TNFRSF1A-213ENST00000540022 LINGO4Q6UY18 593 aa19.29■□□□□ 0.68
TNFRSF1A-213ENST00000540022 GSTA5Q7RTV2 222 aa19.29■□□□□ 0.68
TNFRSF1A-213ENST00000540022 USP33Q8TEY7 942 aa19.29■□□□□ 0.68
TNFRSF1A-213ENST00000540022 GRK7Q8WTQ7 553 aa19.29■□□□□ 0.68
TNFRSF1A-213ENST00000540022 ACDQ96AP0 544 aa19.29■□□□□ 0.68
TNFRSF1A-213ENST00000540022 ZNF419Q96HQ0 510 aaPredicted RBP19.29■□□□□ 0.68
TNFRSF1A-213ENST00000540022 RUNDC3BQ96NL0 473 aa19.29■□□□□ 0.68
TNFRSF1A-213ENST00000540022 PNKPQ96T60 521 aa19.29■□□□□ 0.68
TNFRSF1A-213ENST00000540022 CEP41Q9BYV8 373 aa19.29■□□□□ 0.68
TNFRSF1A-213ENST00000540022 FBRSL1Q9HCM7 1045 aaKnown RBP19.29■□□□□ 0.68
TNFRSF1A-213ENST00000540022 SLC2A4RGQ9NR83 387 aa19.29■□□□□ 0.68
TNFRSF1A-213ENST00000540022 FEZ2Q9UHY8 353 aaPredicted RBP19.29■□□□□ 0.68
TNFRSF1A-213ENST00000540022 NEU2Q9Y3R4 380 aa19.29■□□□□ 0.68
TNFRSF1A-213ENST00000540022 PRRT4C9JH25 899 aa19.28■□□□□ 0.68
TNFRSF1A-213ENST00000540022 SPECC1L-ADORA2AF8WAN1 911 aa19.28■□□□□ 0.68
TNFRSF1A-213ENST00000540022 RNF103O00237 685 aa19.28■□□□□ 0.68
TNFRSF1A-213ENST00000540022 TTI1O43156 1089 aa19.28■□□□□ 0.68
TNFRSF1A-213ENST00000540022 MTSS1O43312 755 aa19.28■□□□□ 0.68
TNFRSF1A-213ENST00000540022 ZSCAN5DPP0CG00 497 aa19.28■□□□□ 0.68
TNFRSF1A-213ENST00000540022 CCNB1P14635 433 aa19.28■□□□□ 0.68
TNFRSF1A-213ENST00000540022 CTHP32929 405 aa19.28■□□□□ 0.68
TNFRSF1A-213ENST00000540022 IFI35P80217 286 aaPredicted RBP19.28■□□□□ 0.68
TNFRSF1A-213ENST00000540022 PFKPQ01813 784 aa19.28■□□□□ 0.68
TNFRSF1A-213ENST00000540022 SLC10A7Q0GE19 358 aa19.28■□□□□ 0.68
TNFRSF1A-213ENST00000540022 HNRNPDQ14103 355 aaKnown RBP19.28■□□□□ 0.68
TNFRSF1A-213ENST00000540022 DHX34Q14147 1143 aaKnown RBP19.28■□□□□ 0.68
TNFRSF1A-213ENST00000540022 TXNDC11Q6PKC3 985 aa19.28■□□□□ 0.68
TNFRSF1A-213ENST00000540022 SFTPA1Q8IWL2 248 aa19.28■□□□□ 0.68
TNFRSF1A-213ENST00000540022 FBXL6Q8N531 539 aa19.28■□□□□ 0.68
TNFRSF1A-213ENST00000540022 TERB1Q8NA31 727 aa19.28■□□□□ 0.68
TNFRSF1A-213ENST00000540022 CCDC26Q8TAB7 109 aa19.28■□□□□ 0.68
TNFRSF1A-213ENST00000540022 WFIKKN2Q8TEU8 576 aa19.28■□□□□ 0.68
TNFRSF1A-213ENST00000540022 FATE1Q969F0 183 aa19.28■□□□□ 0.68
TNFRSF1A-213ENST00000540022 TTC17Q96AE7 1141 aa19.28■□□□□ 0.68
TNFRSF1A-213ENST00000540022 RTP4Q96DX8 246 aa19.28■□□□□ 0.68
TNFRSF1A-213ENST00000540022 LRRC1Q9BTT6 524 aa19.28■□□□□ 0.68
TNFRSF1A-213ENST00000540022 ARIH1Q9Y4X5 557 aaPredicted RBP19.28■□□□□ 0.68
TNFRSF1A-213ENST00000540022 PIAS3Q9Y6X2 628 aa19.28■□□□□ 0.68
TNFRSF1A-213ENST00000540022 SHISA7A6NL88 538 aa19.27■□□□□ 0.68
TNFRSF1A-213ENST00000540022 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.27■□□□□ 0.68
TNFRSF1A-213ENST00000540022 MT-CO1P00395 513 aa19.27■□□□□ 0.68
TNFRSF1A-213ENST00000540022 JCHAINP01591 159 aa19.27■□□□□ 0.68
TNFRSF1A-213ENST00000540022 GALK1P51570 392 aa19.27■□□□□ 0.68
TNFRSF1A-213ENST00000540022 TRIP13Q15645 432 aaPredicted RBP19.27■□□□□ 0.68
TNFRSF1A-213ENST00000540022 C8orf74Q6P047 294 aa19.27■□□□□ 0.68
TNFRSF1A-213ENST00000540022 JAMLQ86YT9 394 aa19.27■□□□□ 0.68
TNFRSF1A-213ENST00000540022 CNTD1Q8N815 330 aa19.27■□□□□ 0.68
TNFRSF1A-213ENST00000540022 ZNF599Q96NL3 588 aa19.27■□□□□ 0.68
TNFRSF1A-213ENST00000540022 IL12RB2Q99665 862 aa19.27■□□□□ 0.68
TNFRSF1A-213ENST00000540022 C8orf33Q9H7E9 229 aaPredicted RBP19.27■□□□□ 0.68
TNFRSF1A-213ENST00000540022 UBA2Q9UBT2 640 aaPredicted RBP19.27■□□□□ 0.68
TNFRSF1A-213ENST00000540022 MYOFQ9NZM1 2061 aa19.27■□□□□ 0.68
TNFRSF1A-213ENST00000540022 COL4A2P08572 1712 aa19.27■□□□□ 0.68
TNFRSF1A-213ENST00000540022 A0A0A0MRY4 1105 aa19.26■□□□□ 0.67
TNFRSF1A-213ENST00000540022 C5orf60A6NFR6 353 aa19.26■□□□□ 0.67
TNFRSF1A-213ENST00000540022 ZSCAN5CA6NGD5 496 aaPredicted RBP19.26■□□□□ 0.67
TNFRSF1A-213ENST00000540022 KAT7O95251 611 aa19.26■□□□□ 0.67
TNFRSF1A-213ENST00000540022 GAS8O95995 478 aa19.26■□□□□ 0.67
TNFRSF1A-213ENST00000540022 KRT14P02533 472 aa19.26■□□□□ 0.67
TNFRSF1A-213ENST00000540022 POLR2EP19388 210 aaKnown RBP19.26■□□□□ 0.67
TNFRSF1A-213ENST00000540022 LBRQ14739 615 aaKnown RBP19.26■□□□□ 0.67
TNFRSF1A-213ENST00000540022 TEX44Q53QW1 395 aa19.26■□□□□ 0.67
TNFRSF1A-213ENST00000540022 TMCO4Q5TGY1 634 aa19.26■□□□□ 0.67
TNFRSF1A-213ENST00000540022 MARC1Q5VT66 337 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms