RNA–Protein interactions for RNA: ENST00000539960.1

PRPF19-204, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 2

Gene PRPF19, Length 796 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-204ENST00000539960 IGLV3-19P01714 112 aa13.71□□□□□ -0.21
PRPF19-204ENST00000539960 DNTTP04053 509 aa13.71□□□□□ -0.21
PRPF19-204ENST00000539960 SERPINH1P50454 418 aaKnown RBP13.71□□□□□ -0.21
PRPF19-204ENST00000539960 GEMIN4P57678 1058 aaKnown RBP13.71□□□□□ -0.21
PRPF19-204ENST00000539960 KRT81Q14533 505 aa13.71□□□□□ -0.21
PRPF19-204ENST00000539960 ELAVL3Q14576 367 aaKnown RBP13.71□□□□□ -0.21
PRPF19-204ENST00000539960 PDK2Q15119 407 aa13.71□□□□□ -0.21
PRPF19-204ENST00000539960 ELF2Q15723 593 aa13.71□□□□□ -0.21
PRPF19-204ENST00000539960 AFMIDQ63HM1 303 aa13.71□□□□□ -0.21
PRPF19-204ENST00000539960 SLC36A4Q6YBV0 504 aa13.71□□□□□ -0.21
PRPF19-204ENST00000539960 Q6ZVU0 165 aa13.71□□□□□ -0.21
PRPF19-204ENST00000539960 MMAAQ8IVH4 418 aaKnown RBP13.71□□□□□ -0.21
PRPF19-204ENST00000539960 MAP7D3Q8IWC1 876 aa13.71□□□□□ -0.21
PRPF19-204ENST00000539960 ACRBPQ8NEB7 543 aa13.71□□□□□ -0.21
PRPF19-204ENST00000539960 LOXL4Q96JB6 756 aa13.71□□□□□ -0.21
PRPF19-204ENST00000539960 CEP44Q9C0F1 390 aa13.71□□□□□ -0.21
PRPF19-204ENST00000539960 SLC39A8Q9C0K1 460 aa13.71□□□□□ -0.21
PRPF19-204ENST00000539960 CD93Q9NPY3 652 aa13.71□□□□□ -0.21
PRPF19-204ENST00000539960 RCOR3Q9P2K3 495 aaPredicted RBP13.71□□□□□ -0.21
PRPF19-204ENST00000539960 SCML1Q9UN30 329 aa13.71□□□□□ -0.21
PRPF19-204ENST00000539960 CYP8B1Q9UNU6 501 aa13.71□□□□□ -0.21
PRPF19-204ENST00000539960 FARP1Q9Y4F1 1045 aaPredicted RBP13.71□□□□□ -0.21
PRPF19-204ENST00000539960 ALG6Q9Y672 507 aa13.71□□□□□ -0.21
PRPF19-204ENST00000539960 ARHGAP42A6NI28 874 aa13.7□□□□□ -0.22
PRPF19-204ENST00000539960 BTNL10A8MVZ5 291 aa13.7□□□□□ -0.22
PRPF19-204ENST00000539960 ALOX15BO15296 676 aa13.7□□□□□ -0.22
PRPF19-204ENST00000539960 PJA2O43164 708 aa13.7□□□□□ -0.22
PRPF19-204ENST00000539960 BUB1O43683 1085 aa13.7□□□□□ -0.22
PRPF19-204ENST00000539960 BUB1BO60566 1050 aaPredicted RBP13.7□□□□□ -0.22
PRPF19-204ENST00000539960 ZNF821O75541 412 aaPredicted RBP13.7□□□□□ -0.22
PRPF19-204ENST00000539960 RETP07949 1114 aa13.7□□□□□ -0.22
PRPF19-204ENST00000539960 CD48P09326 243 aa13.7□□□□□ -0.22
PRPF19-204ENST00000539960 COMTP21964 271 aa13.7□□□□□ -0.22
PRPF19-204ENST00000539960 CD6P30203 668 aa13.7□□□□□ -0.22
PRPF19-204ENST00000539960 OXTRP30559 389 aa13.7□□□□□ -0.22
PRPF19-204ENST00000539960 SLC8A1P32418 973 aa13.7□□□□□ -0.22
PRPF19-204ENST00000539960 GJC1P36383 396 aa13.7□□□□□ -0.22
PRPF19-204ENST00000539960 PAPOLAP51003 745 aaKnown RBP13.7□□□□□ -0.22
PRPF19-204ENST00000539960 VAV2P52735 878 aa13.7□□□□□ -0.22
PRPF19-204ENST00000539960 SFSWAPQ12872 951 aaKnown RBP13.7□□□□□ -0.22
PRPF19-204ENST00000539960 MMRN1Q13201 1228 aa13.7□□□□□ -0.22
PRPF19-204ENST00000539960 CST6Q15828 149 aa13.7□□□□□ -0.22
PRPF19-204ENST00000539960 INO80DQ53TQ3 878 aaPredicted RBP13.7□□□□□ -0.22
PRPF19-204ENST00000539960 SPDYCQ5MJ68 293 aa13.7□□□□□ -0.22
PRPF19-204ENST00000539960 LRRC38Q5VT99 294 aa13.7□□□□□ -0.22
PRPF19-204ENST00000539960 LPCAT2Q7L5N7 544 aa13.7□□□□□ -0.22
PRPF19-204ENST00000539960 DSG4Q86SJ6 1040 aa13.7□□□□□ -0.22
PRPF19-204ENST00000539960 ALYREFQ86V81 257 aaKnown RBP13.7□□□□□ -0.22
PRPF19-204ENST00000539960 ZNF354CQ86Y25 554 aa13.7□□□□□ -0.22
PRPF19-204ENST00000539960 PLPP6Q8IY26 295 aa13.7□□□□□ -0.22
PRPF19-204ENST00000539960 PCDH20Q8N6Y1 951 aaKnown RBP13.7□□□□□ -0.22
PRPF19-204ENST00000539960 OR2A12Q8NGT7 310 aa13.7□□□□□ -0.22
PRPF19-204ENST00000539960 OR8D1Q8WZ84 308 aa13.7□□□□□ -0.22
PRPF19-204ENST00000539960 RUBCNQ92622 972 aa13.7□□□□□ -0.22
PRPF19-204ENST00000539960 ISG20Q96AZ6 181 aaKnown RBP13.7□□□□□ -0.22
PRPF19-204ENST00000539960 CELF6Q96J87 481 aaKnown RBP13.7□□□□□ -0.22
PRPF19-204ENST00000539960 CALR3Q96L12 384 aaKnown RBP13.7□□□□□ -0.22
PRPF19-204ENST00000539960 LACRTQ9GZZ8 138 aa13.7□□□□□ -0.22
PRPF19-204ENST00000539960 ETNK2Q9NVF9 386 aa13.7□□□□□ -0.22
PRPF19-204ENST00000539960 WSB2Q9NYS7 404 aaPredicted RBP13.7□□□□□ -0.22
PRPF19-204ENST00000539960 SALL4Q9UJQ4 1053 aa13.7□□□□□ -0.22
PRPF19-204ENST00000539960 ACTL7AQ9Y615 435 aa13.7□□□□□ -0.22
PRPF19-204ENST00000539960 DUSP10Q9Y6W6 482 aa13.7□□□□□ -0.22
PRPF19-204ENST00000539960 GPR179Q6PRD1 2367 aa13.69□□□□□ -0.22
PRPF19-204ENST00000539960 MUC22E2RYF6 1773 aaPredicted RBP13.69□□□□□ -0.22
PRPF19-204ENST00000539960 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.69□□□□□ -0.22
PRPF19-204ENST00000539960 BNIP3LO60238 219 aa13.69□□□□□ -0.22
PRPF19-204ENST00000539960 IL1BP01584 269 aa13.69□□□□□ -0.22
PRPF19-204ENST00000539960 C5AR1P21730 350 aa13.69□□□□□ -0.22
PRPF19-204ENST00000539960 RECQLP46063 649 aaPredicted RBP13.69□□□□□ -0.22
PRPF19-204ENST00000539960 DNA2P51530 1060 aa13.69□□□□□ -0.22
PRPF19-204ENST00000539960 DPYSL3Q14195 570 aa13.69□□□□□ -0.22
PRPF19-204ENST00000539960 TTC31Q49AM3 519 aaPredicted RBP13.69□□□□□ -0.22
PRPF19-204ENST00000539960 ANKRD20A8PQ5CZ79 823 aa13.69□□□□□ -0.22
PRPF19-204ENST00000539960 CARD16Q5EG05 197 aa13.69□□□□□ -0.22
PRPF19-204ENST00000539960 ZFYVE27Q5T4F4 411 aa13.69□□□□□ -0.22
PRPF19-204ENST00000539960 PMS2CLQ68D20 193 aa13.69□□□□□ -0.22
PRPF19-204ENST00000539960 C22orf39Q6P5X5 142 aa13.69□□□□□ -0.22
PRPF19-204ENST00000539960 TMCO3Q6UWJ1 677 aa13.69□□□□□ -0.22
PRPF19-204ENST00000539960 LEKR1Q6ZMV7 388 aa13.69□□□□□ -0.22
PRPF19-204ENST00000539960 USP30Q70CQ3 517 aa13.69□□□□□ -0.22
PRPF19-204ENST00000539960 KIAA1328Q86T90 577 aa13.69□□□□□ -0.22
PRPF19-204ENST00000539960 CACUL1Q86Y37 369 aa13.69□□□□□ -0.22
PRPF19-204ENST00000539960 ARHGAP12Q8IWW6 846 aa13.69□□□□□ -0.22
PRPF19-204ENST00000539960 RHOT1Q8IXI2 618 aa13.69□□□□□ -0.22
PRPF19-204ENST00000539960 TMEFF1Q8IYR6 380 aa13.69□□□□□ -0.22
PRPF19-204ENST00000539960 NPWQ8N729 165 aa13.69□□□□□ -0.22
PRPF19-204ENST00000539960 CASKIN2Q8WXE0 1202 aa13.69□□□□□ -0.22
PRPF19-204ENST00000539960 RAPGEF5Q92565 580 aa13.69□□□□□ -0.22
PRPF19-204ENST00000539960 TOE1Q96GM8 510 aaKnown RBP13.69□□□□□ -0.22
PRPF19-204ENST00000539960 CCDC114Q96M63 670 aa13.69□□□□□ -0.22
PRPF19-204ENST00000539960 CALN1Q9BXU9 219 aa13.69□□□□□ -0.22
PRPF19-204ENST00000539960 TNKS2Q9H2K2 1166 aa13.69□□□□□ -0.22
PRPF19-204ENST00000539960 PABPC3Q9H361 631 aaKnown RBP13.69□□□□□ -0.22
PRPF19-204ENST00000539960 FBXL12Q9NXK8 326 aa13.69□□□□□ -0.22
PRPF19-204ENST00000539960 NCDNQ9UBB6 729 aa13.69□□□□□ -0.22
PRPF19-204ENST00000539960 GMEB2Q9UKD1 530 aa13.69□□□□□ -0.22
PRPF19-204ENST00000539960 PPM1HQ9ULR3 514 aa13.69□□□□□ -0.22
PRPF19-204ENST00000539960 NCKAP1Q9Y2A7 1128 aa13.69□□□□□ -0.22
PRPF19-204ENST00000539960 FCF1Q9Y324 198 aaKnown RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms