RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 OLFM3Q96PB7 478 aa15.75■□□□□ 0.11
DDB1-216ENST00000539739 FERMT1Q9BQL6 677 aa15.75■□□□□ 0.11
DDB1-216ENST00000539739 HOMER3Q9NSC5 361 aa15.75■□□□□ 0.11
DDB1-216ENST00000539739 HACD1B0YJ81 288 aa15.74■□□□□ 0.11
DDB1-216ENST00000539739 K7EQS6 105 aa15.74■□□□□ 0.11
DDB1-216ENST00000539739 NPC1O15118 1278 aa15.74■□□□□ 0.11
DDB1-216ENST00000539739 PRAMEF11O60813 436 aa15.74■□□□□ 0.11
DDB1-216ENST00000539739 ZMPSTE24O75844 475 aa15.74■□□□□ 0.11
DDB1-216ENST00000539739 URI1O94763 535 aaPredicted RBP15.74■□□□□ 0.11
DDB1-216ENST00000539739 SRPRAP08240 638 aaKnown RBP15.74■□□□□ 0.11
DDB1-216ENST00000539739 GLDCP23378 1020 aa15.74■□□□□ 0.11
DDB1-216ENST00000539739 EIF3EP60228 445 aaKnown RBP15.74■□□□□ 0.11
DDB1-216ENST00000539739 AP1B1Q10567 949 aa15.74■□□□□ 0.11
DDB1-216ENST00000539739 LRRC32Q14392 662 aa15.74■□□□□ 0.11
DDB1-216ENST00000539739 METTL3Q86U44 580 aaKnown RBP15.74■□□□□ 0.11
DDB1-216ENST00000539739 ZC3H18Q86VM9 953 aaKnown RBP15.74■□□□□ 0.11
DDB1-216ENST00000539739 KCNV2Q8TDN2 545 aa15.74■□□□□ 0.11
DDB1-216ENST00000539739 CYB5D2Q8WUJ1 264 aa15.74■□□□□ 0.11
DDB1-216ENST00000539739 TFB1MQ8WVM0 346 aaKnown RBP15.74■□□□□ 0.11
DDB1-216ENST00000539739 TSGA13Q96PP4 275 aa15.74■□□□□ 0.11
DDB1-216ENST00000539739 MFSD1Q9H3U5 465 aa15.74■□□□□ 0.11
DDB1-216ENST00000539739 TBC1D17Q9HA65 648 aa15.74■□□□□ 0.11
DDB1-216ENST00000539739 LTB4R2Q9NPC1 389 aa15.74■□□□□ 0.11
DDB1-216ENST00000539739 UBA2Q9UBT2 640 aaPredicted RBP15.74■□□□□ 0.11
DDB1-216ENST00000539739 SLC8A2Q9UPR5 921 aa15.74■□□□□ 0.11
DDB1-216ENST00000539739 ERVW-1Q9UQF0 538 aa15.74■□□□□ 0.11
DDB1-216ENST00000539739 MIA3Q5JRA6 1907 aa15.74■□□□□ 0.11
DDB1-216ENST00000539739 KIAA1549LQ6ZVL6 1849 aa15.73■□□□□ 0.11
DDB1-216ENST00000539739 GOLGA6L10A0A0M3HER8 536 aa15.73■□□□□ 0.11
DDB1-216ENST00000539739 FAM170BA6NMN3 283 aa15.73■□□□□ 0.11
DDB1-216ENST00000539739 J3KR12 359 aa15.73■□□□□ 0.11
DDB1-216ENST00000539739 MAFKO60675 156 aa15.73■□□□□ 0.11
DDB1-216ENST00000539739 ZNF189O75820 626 aaPredicted RBP15.73■□□□□ 0.11
DDB1-216ENST00000539739 CTSOP43234 321 aaPredicted RBP15.73■□□□□ 0.11
DDB1-216ENST00000539739 SEC13P55735 322 aa15.73■□□□□ 0.11
DDB1-216ENST00000539739 ARF5P84085 180 aa15.73■□□□□ 0.11
DDB1-216ENST00000539739 PPIDQ08752 370 aaKnown RBP15.73■□□□□ 0.11
DDB1-216ENST00000539739 TUBB2AQ13885 445 aa15.73■□□□□ 0.11
DDB1-216ENST00000539739 CCINQ13939 588 aa15.73■□□□□ 0.11
DDB1-216ENST00000539739 ARHGAP36Q6ZRI8 547 aa15.73■□□□□ 0.11
DDB1-216ENST00000539739 TRMT11Q7Z4G4 463 aaKnown RBP15.73■□□□□ 0.11
DDB1-216ENST00000539739 CREG2Q8IUH2 290 aa15.73■□□□□ 0.11
DDB1-216ENST00000539739 SFTPA1Q8IWL2 248 aa15.73■□□□□ 0.11
DDB1-216ENST00000539739 CCDC13Q8IYE1 715 aa15.73■□□□□ 0.11
DDB1-216ENST00000539739 SYNPOQ8N3V7 929 aa15.73■□□□□ 0.11
DDB1-216ENST00000539739 ZNF513Q8N8E2 541 aaPredicted RBP15.73■□□□□ 0.11
DDB1-216ENST00000539739 ATP11CQ8NB49 1132 aa15.73■□□□□ 0.11
DDB1-216ENST00000539739 CASKIN2Q8WXE0 1202 aa15.73■□□□□ 0.11
DDB1-216ENST00000539739 SORCS1Q8WY21 1168 aa15.73■□□□□ 0.11
DDB1-216ENST00000539739 RPL10LQ96L21 214 aaKnown RBP15.73■□□□□ 0.11
DDB1-216ENST00000539739 ZNF599Q96NL3 588 aa15.73■□□□□ 0.11
DDB1-216ENST00000539739 LGMNQ99538 433 aa15.73■□□□□ 0.11
DDB1-216ENST00000539739 TUBB2BQ9BVA1 445 aa15.73■□□□□ 0.11
DDB1-216ENST00000539739 MED4Q9NPJ6 270 aa15.73■□□□□ 0.11
DDB1-216ENST00000539739 VCANP13611 3396 aa15.72■□□□□ 0.11
DDB1-216ENST00000539739 KRIT1O00522 736 aa15.72■□□□□ 0.11
DDB1-216ENST00000539739 MATN3O15232 486 aa15.72■□□□□ 0.11
DDB1-216ENST00000539739 RBP3P10745 1247 aa15.72■□□□□ 0.11
DDB1-216ENST00000539739 HNRNPLP14866 589 aaKnown RBP eCLIP15.72■□□□□ 0.116e-6■■■□□ 18.9
DDB1-216ENST00000539739 TARSP26639 723 aaKnown RBP15.72■□□□□ 0.11
DDB1-216ENST00000539739 TIE1P35590 1138 aa15.72■□□□□ 0.11
DDB1-216ENST00000539739 VASPP50552 380 aaPredicted RBP15.72■□□□□ 0.11
DDB1-216ENST00000539739 CLCN6P51797 869 aa15.72■□□□□ 0.11
DDB1-216ENST00000539739 MRPS21P82921 87 aaKnown RBP15.72■□□□□ 0.11
DDB1-216ENST00000539739 RFTN1Q14699 578 aaPredicted RBP15.72■□□□□ 0.11
DDB1-216ENST00000539739 FNDC3BQ53EP0 1204 aaKnown RBP15.72■□□□□ 0.11
DDB1-216ENST00000539739 INO80DQ53TQ3 878 aaPredicted RBP15.72■□□□□ 0.11
DDB1-216ENST00000539739 DARS2Q6PI48 645 aaKnown RBP15.72■□□□□ 0.11
DDB1-216ENST00000539739 LINGO4Q6UY18 593 aa15.72■□□□□ 0.11
DDB1-216ENST00000539739 TRIM67Q6ZTA4 783 aa15.72■□□□□ 0.11
DDB1-216ENST00000539739 CDKL3Q8IVW4 592 aaPredicted RBP15.72■□□□□ 0.11
DDB1-216ENST00000539739 BBS5Q8N3I7 341 aa15.72■□□□□ 0.11
DDB1-216ENST00000539739 KDM1BQ8NB78 822 aa15.72■□□□□ 0.11
DDB1-216ENST00000539739 EZH1Q92800 747 aaPredicted RBP15.72■□□□□ 0.11
DDB1-216ENST00000539739 FAM118BQ9BPY3 351 aa15.72■□□□□ 0.11
DDB1-216ENST00000539739 OSBPL6Q9BZF3 934 aa15.72■□□□□ 0.11
DDB1-216ENST00000539739 LMAN1LQ9HAT1 526 aa15.72■□□□□ 0.11
DDB1-216ENST00000539739 THAP10Q9P2Z0 257 aaPredicted RBP15.72■□□□□ 0.11
DDB1-216ENST00000539739 CDC23Q9UJX2 597 aa15.72■□□□□ 0.11
DDB1-216ENST00000539739 HS3ST2Q9Y278 367 aa15.72■□□□□ 0.11
DDB1-216ENST00000539739 R3HDM2Q9Y2K5 976 aaKnown RBP15.72■□□□□ 0.11
DDB1-216ENST00000539739 CHD5Q8TDI0 1954 aa15.72■□□□□ 0.11
DDB1-216ENST00000539739 MTSS1O43312 755 aa15.72■□□□□ 0.11
DDB1-216ENST00000539739 NEBLO76041 1014 aa15.72■□□□□ 0.11
DDB1-216ENST00000539739 KIR2DL1P43626 348 aaPredicted RBP15.72■□□□□ 0.11
DDB1-216ENST00000539739 SERPINH1P50454 418 aaKnown RBP15.72■□□□□ 0.11
DDB1-216ENST00000539739 RENBPP51606 427 aa15.72■□□□□ 0.11
DDB1-216ENST00000539739 HNRNPDQ14103 355 aaKnown RBP15.72■□□□□ 0.11
DDB1-216ENST00000539739 ZNF234Q14588 700 aa15.72■□□□□ 0.11
DDB1-216ENST00000539739 SIX1Q15475 284 aaPredicted RBP15.72■□□□□ 0.11
DDB1-216ENST00000539739 CCNG2Q16589 344 aa15.72■□□□□ 0.11
DDB1-216ENST00000539739 ACCSLQ4AC99 568 aa15.72■□□□□ 0.11
DDB1-216ENST00000539739 HSF5Q4G112 596 aaPredicted RBP15.72■□□□□ 0.11
DDB1-216ENST00000539739 SLC45A4Q5BKX6 768 aa15.72■□□□□ 0.11
DDB1-216ENST00000539739 TMCO4Q5TGY1 634 aa15.72■□□□□ 0.11
DDB1-216ENST00000539739 EGFLAMQ63HQ2 1017 aa15.72■□□□□ 0.11
DDB1-216ENST00000539739 SDE2Q6IQ49 451 aa15.72■□□□□ 0.11
DDB1-216ENST00000539739 LEKR1Q6ZMV7 388 aa15.72■□□□□ 0.11
DDB1-216ENST00000539739 SH2D3CQ8N5H7 860 aa15.72■□□□□ 0.11
DDB1-216ENST00000539739 C1orf54Q8WWF1 131 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms