RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 TAF12Q16514 161 aa10.36□□□□□ -0.75
SPARC-209ENST00000539687 TRIM60Q495X7 471 aa10.36□□□□□ -0.75
SPARC-209ENST00000539687 C5orf22Q49AR2 442 aa10.36□□□□□ -0.75
SPARC-209ENST00000539687 ANKRD20A4Q4UJ75 823 aa10.36□□□□□ -0.75
SPARC-209ENST00000539687 SPOUT1Q5T280 376 aaKnown RBP10.36□□□□□ -0.75
SPARC-209ENST00000539687 HECTD3Q5T447 861 aa10.36□□□□□ -0.75
SPARC-209ENST00000539687 PIK3R6Q5UE93 754 aa10.36□□□□□ -0.75
SPARC-209ENST00000539687 MARC1Q5VT66 337 aa10.36□□□□□ -0.75
SPARC-209ENST00000539687 NLRP9Q7RTR0 991 aa10.36□□□□□ -0.75
SPARC-209ENST00000539687 ZNF683Q8IZ20 524 aa10.36□□□□□ -0.75
SPARC-209ENST00000539687 MPP5Q8N3R9 675 aa10.36□□□□□ -0.75
SPARC-209ENST00000539687 ZNF461Q8TAF7 563 aa10.36□□□□□ -0.75
SPARC-209ENST00000539687 LRRN4Q8WUT4 740 aa10.36□□□□□ -0.75
SPARC-209ENST00000539687 CCT6BQ92526 530 aa10.36□□□□□ -0.75
SPARC-209ENST00000539687 ZNF75CPQ92670 426 aaPredicted RBP10.36□□□□□ -0.75
SPARC-209ENST00000539687 TRMT2BQ96GJ1 504 aaKnown RBP10.36□□□□□ -0.75
SPARC-209ENST00000539687 OXNAD1Q96HP4 312 aaPredicted RBP10.36□□□□□ -0.75
SPARC-209ENST00000539687 SCLYQ96I15 445 aa10.36□□□□□ -0.75
SPARC-209ENST00000539687 MYRFLQ96LU7 910 aa10.36□□□□□ -0.75
SPARC-209ENST00000539687 RANBP9Q96S59 729 aa10.36□□□□□ -0.75
SPARC-209ENST00000539687 SRPK1Q96SB4 655 aaKnown RBP10.36□□□□□ -0.75
SPARC-209ENST00000539687 SIKE1Q9BRV8 207 aa10.36□□□□□ -0.75
SPARC-209ENST00000539687 MLPHQ9BV36 600 aaPredicted RBP10.36□□□□□ -0.75
SPARC-209ENST00000539687 KIFC1Q9BW19 673 aa10.36□□□□□ -0.75
SPARC-209ENST00000539687 CEP41Q9BYV8 373 aa10.36□□□□□ -0.75
SPARC-209ENST00000539687 PPP1R12CQ9BZL4 782 aa10.36□□□□□ -0.75
SPARC-209ENST00000539687 FAM96AQ9H5X1 160 aa10.36□□□□□ -0.75
SPARC-209ENST00000539687 MANSC1Q9H8J5 431 aa10.36□□□□□ -0.75
SPARC-209ENST00000539687 MLXIPLQ9NP71 852 aa10.36□□□□□ -0.75
SPARC-209ENST00000539687 RBM22Q9NW64 420 aaKnown RBP eCLIP10.36□□□□□ -0.75
SPARC-209ENST00000539687 OSER1Q9NX31 292 aa10.36□□□□□ -0.75
SPARC-209ENST00000539687 TRPM5Q9NZQ8 1165 aa10.36□□□□□ -0.75
SPARC-209ENST00000539687 PLLPQ9Y342 182 aa10.36□□□□□ -0.75
SPARC-209ENST00000539687 SNX10Q9Y5X0 201 aa10.36□□□□□ -0.75
SPARC-209ENST00000539687 TTC3P53804 2025 aa10.36□□□□□ -0.75
SPARC-209ENST00000539687 CFAP73A6NFT4 308 aa10.35□□□□□ -0.75
SPARC-209ENST00000539687 CXorf49A8MYA2 514 aaPredicted RBP10.35□□□□□ -0.75
SPARC-209ENST00000539687 H0YHG0 523 aa10.35□□□□□ -0.75
SPARC-209ENST00000539687 HNRNPCL1O60812 293 aaKnown RBP10.35□□□□□ -0.75
SPARC-209ENST00000539687 RFPL1O75677 317 aa10.35□□□□□ -0.75
SPARC-209ENST00000539687 APOA4P06727 396 aa10.35□□□□□ -0.75
SPARC-209ENST00000539687 CES1P23141 567 aa10.35□□□□□ -0.75
SPARC-209ENST00000539687 ADRA1DP25100 572 aa10.35□□□□□ -0.75
SPARC-209ENST00000539687 FOXN2P32314 431 aa10.35□□□□□ -0.75
SPARC-209ENST00000539687 ELF1P32519 619 aa10.35□□□□□ -0.75
SPARC-209ENST00000539687 SKIV2L2P42285 1042 aaKnown RBP10.35□□□□□ -0.75
SPARC-209ENST00000539687 ETV4P43268 484 aa10.35□□□□□ -0.75
SPARC-209ENST00000539687 SERPINB4P48594 390 aa10.35□□□□□ -0.75
SPARC-209ENST00000539687 GATMP50440 423 aa10.35□□□□□ -0.75
SPARC-209ENST00000539687 USP46P62068 366 aa10.35□□□□□ -0.75
SPARC-209ENST00000539687 PDE1BQ01064 536 aa10.35□□□□□ -0.75
SPARC-209ENST00000539687 ACTN3Q08043 901 aaPredicted RBP10.35□□□□□ -0.75
SPARC-209ENST00000539687 RFTN1Q14699 578 aaPredicted RBP10.35□□□□□ -0.75
SPARC-209ENST00000539687 ZKSCAN8Q15776 578 aaPredicted RBP10.35□□□□□ -0.75
SPARC-209ENST00000539687 CCDC153Q494R4 210 aa10.35□□□□□ -0.75
SPARC-209ENST00000539687 SDHAF4Q5VUM1 108 aa10.35□□□□□ -0.75
SPARC-209ENST00000539687 PKN3Q6P5Z2 889 aa10.35□□□□□ -0.75
SPARC-209ENST00000539687 TRMT10BQ6PF06 316 aaKnown RBP10.35□□□□□ -0.75
SPARC-209ENST00000539687 FBXO46Q6PJ61 603 aaPredicted RBP10.35□□□□□ -0.75
SPARC-209ENST00000539687 SH2D5Q6ZV89 423 aa10.35□□□□□ -0.75
SPARC-209ENST00000539687 DEFB128Q7Z7B8 93 aa10.35□□□□□ -0.75
SPARC-209ENST00000539687 ITIH5Q86UX2 942 aa10.35□□□□□ -0.75
SPARC-209ENST00000539687 MIB1Q86YT6 1006 aa10.35□□□□□ -0.75
SPARC-209ENST00000539687 LMNTD2Q8IXW0 634 aa10.35□□□□□ -0.75
SPARC-209ENST00000539687 NDUFAF2Q8N183 169 aa10.35□□□□□ -0.75
SPARC-209ENST00000539687 TEX26Q8N6G2 289 aa10.35□□□□□ -0.75
SPARC-209ENST00000539687 ZSCAN18Q8TBC5 510 aaPredicted RBP10.35□□□□□ -0.75
SPARC-209ENST00000539687 CALML6Q8TD86 181 aa10.35□□□□□ -0.75
SPARC-209ENST00000539687 PEX13Q92968 403 aa10.35□□□□□ -0.75
SPARC-209ENST00000539687 TOP1MTQ969P6 601 aa10.35□□□□□ -0.75
SPARC-209ENST00000539687 ISL2Q96A47 359 aa10.35□□□□□ -0.75
SPARC-209ENST00000539687 SERAC1Q96JX3 654 aa10.35□□□□□ -0.75
SPARC-209ENST00000539687 ZNF512Q96ME7 567 aaPredicted RBP10.35□□□□□ -0.75
SPARC-209ENST00000539687 TSNARE1Q96NA8 513 aa10.35□□□□□ -0.75
SPARC-209ENST00000539687 RPRD1AQ96P16 312 aaPredicted RBP10.35□□□□□ -0.75
SPARC-209ENST00000539687 FAM167BQ9BTA0 163 aa10.35□□□□□ -0.75
SPARC-209ENST00000539687 TUBB6Q9BUF5 446 aa10.35□□□□□ -0.75
SPARC-209ENST00000539687 TRIM55Q9BYV6 548 aa10.35□□□□□ -0.75
SPARC-209ENST00000539687 MAGEH1Q9H213 219 aa10.35□□□□□ -0.75
SPARC-209ENST00000539687 RASSF4Q9H2L5 321 aa10.35□□□□□ -0.75
SPARC-209ENST00000539687 CWH43Q9H720 699 aa10.35□□□□□ -0.75
SPARC-209ENST00000539687 PLAC1Q9HBJ0 212 aa10.35□□□□□ -0.75
SPARC-209ENST00000539687 RXFP1Q9HBX9 757 aa10.35□□□□□ -0.75
SPARC-209ENST00000539687 SMYD2Q9NRG4 433 aa10.35□□□□□ -0.75
SPARC-209ENST00000539687 SPG21Q9NZD8 308 aa10.35□□□□□ -0.75
SPARC-209ENST00000539687 PRKAG3Q9UGI9 489 aa10.35□□□□□ -0.75
SPARC-209ENST00000539687 ANKRD6Q9Y2G4 727 aa10.35□□□□□ -0.75
SPARC-209ENST00000539687 SLC27A5Q9Y2P5 690 aa10.35□□□□□ -0.75
SPARC-209ENST00000539687 HEATR9A2RTY3 570 aa10.34□□□□□ -0.75
SPARC-209ENST00000539687 TYW5A2RUC4 315 aaKnown RBP10.34□□□□□ -0.75
SPARC-209ENST00000539687 GOLGA8RI6L899 631 aa10.34□□□□□ -0.75
SPARC-209ENST00000539687 ACSL4O60488 711 aa10.34□□□□□ -0.75
SPARC-209ENST00000539687 H2AFYO75367 372 aaKnown RBP10.34□□□□□ -0.75
SPARC-209ENST00000539687 DNAJC8O75937 253 aaPredicted RBP10.34□□□□□ -0.75
SPARC-209ENST00000539687 ABLIM3O94929 683 aa10.34□□□□□ -0.75
SPARC-209ENST00000539687 PAPSS2O95340 614 aaPredicted RBP10.34□□□□□ -0.75
SPARC-209ENST00000539687 ITGA2BP08514 1039 aa10.34□□□□□ -0.75
SPARC-209ENST00000539687 ATF6P18850 670 aa10.34□□□□□ -0.75
SPARC-209ENST00000539687 TACR2P21452 398 aa10.34□□□□□ -0.75
SPARC-209ENST00000539687 OR1D2P34982 312 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms