RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 ZSCAN9O15535 394 aaPredicted RBP1.14□□□□□ -2.23
HIF1A-204ENST00000539097 ADRB2P07550 413 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 CPA1P15085 419 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 ATF7P17544 494 aaPredicted RBP1.14□□□□□ -2.23
HIF1A-204ENST00000539097 CXCR5P32302 372 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 ZNF84P51523 738 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 PPP5CP53041 499 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 RARSP54136 660 aaKnown RBP1.14□□□□□ -2.23
HIF1A-204ENST00000539097 CXADRP78310 365 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 SIRPAP78324 504 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 SHC2P98077 582 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 KRT17Q04695 432 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 SF3A3Q12874 501 aaKnown RBP eCLIP1.14□□□□□ -2.237e-6■■□□□ 12
HIF1A-204ENST00000539097 MAPK7Q13164 816 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 MPP3Q13368 585 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 KCTD2Q14681 263 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 MED22Q15528 200 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 HIST2H2ACQ16777 129 aaPredicted RBP1.14□□□□□ -2.23
HIF1A-204ENST00000539097 ODF3L2Q3SX64 289 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 CC2D1BQ5T0F9 858 aaKnown RBP1.14□□□□□ -2.23
HIF1A-204ENST00000539097 WDR78Q5VTH9 848 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 FAAH2Q6GMR7 532 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 RINT1Q6NUQ1 792 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 KLHL17Q6TDP4 642 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 DBX2Q6ZNG2 339 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 PTCHD4Q6ZW05 846 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 IGFN1Q86VF2 1251 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 NUDT13Q86X67 352 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 CEP57Q86XR8 500 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 LINC00346Q8IVM7 164 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 KIAA2013Q8IYS2 634 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 ADGRF2Q8IZF7 708 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 CHST13Q8NET6 341 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 SSH3Q8TE77 659 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 IP6K1Q92551 441 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 MASTLQ96GX5 879 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 ASB2Q96Q27 587 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 HTATIP2Q9BUP3 242 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 C2orf40Q9H1Z8 148 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 TXNRD2Q9NNW7 524 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 SEMA4BQ9NPR2 832 aaPredicted RBP1.14□□□□□ -2.23
HIF1A-204ENST00000539097 POGKQ9P215 609 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 HSPB7Q9UBY9 170 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 GIMAP2Q9UG22 337 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 MKLN1Q9UL63 735 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 NENFQ9UMX5 172 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 A0A0A0MQY5 61 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 MYO1CO00159 1063 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 IFIT3O14879 490 aaKnown RBP1.13□□□□□ -2.23
HIF1A-204ENST00000539097 TIPRLO75663 272 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 HIST1H2ABP04908 130 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 KRT8P05787 483 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 HIST1H2ADP20671 130 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 CASTP20810 708 aaKnown RBP1.13□□□□□ -2.23
HIF1A-204ENST00000539097 TGM2P21980 687 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 NPTX2P47972 431 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 MTNR1AP48039 350 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 RARRES1P49788 294 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 PGDP52209 483 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 CASP6P55212 293 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 RPL15P61313 204 aaKnown RBP1.13□□□□□ -2.23
HIF1A-204ENST00000539097 SUMO2P61956 95 aaKnown RBP1.13□□□□□ -2.23
HIF1A-204ENST00000539097 LARS2Q15031 903 aaKnown RBP1.13□□□□□ -2.23
HIF1A-204ENST00000539097 ATG16L1Q676U5 607 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 KRT80Q6KB66 452 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 KLHL24Q6TFL4 600 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 SYT10Q6XYQ8 523 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 ENOSF1Q7L5Y1 443 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 HIST3H2AQ7L7L0 130 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 ZSCAN2Q7Z7L9 614 aaPredicted RBP1.13□□□□□ -2.23
HIF1A-204ENST00000539097 GPR149Q86SP6 731 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 PALM2Q8IXS6 379 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 GSPT2Q8IYD1 628 aaKnown RBP1.13□□□□□ -2.23
HIF1A-204ENST00000539097 SYNE4Q8N205 404 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 TMEM57Q8N5G2 664 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 PAF1Q8N7H5 531 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 POMGNT2Q8NAT1 580 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 NEXN-AS1Q8NBZ9 246 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 BEND2Q8NDZ0 799 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 TFAP2BQ92481 460 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 EXTL1Q92935 676 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 ERP27Q96DN0 273 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 RNFT2Q96EX2 444 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 RBM17Q96I25 401 aaKnown RBP1.13□□□□□ -2.23
HIF1A-204ENST00000539097 LMLNQ96KR4 655 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 TRAPPC9Q96Q05 1148 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 FYTTD1Q96QD9 318 aaKnown RBP1.13□□□□□ -2.23
HIF1A-204ENST00000539097 NR1H4Q96RI1 486 aaPredicted RBP1.13□□□□□ -2.23
HIF1A-204ENST00000539097 ACTRT3Q9BYD9 372 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 ELAC1Q9H777 363 aaKnown RBP1.13□□□□□ -2.23
HIF1A-204ENST00000539097 KAT14Q9H8E8 782 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 MBNL1Q9NR56 388 aaKnown RBP1.13□□□□□ -2.23
HIF1A-204ENST00000539097 SLC2A4RGQ9NR83 387 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 DIAPH3Q9NSV4 1193 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 ANKRD10Q9NXR5 420 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 LIPT1Q9Y234 373 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 WNT6Q9Y6F9 365 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 DISP3Q9P2K9 1392 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 LRP5O75197 1615 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 A1L4Q6 167 aa1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms