RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 DLG2Q15700 870 aa14.38□□□□□ -0.11
ACTN1-205ENST00000538545 PGBD5Q8N414 524 aa14.38□□□□□ -0.11
ACTN1-205ENST00000538545 EXOC2Q96KP1 924 aa14.38□□□□□ -0.11
ACTN1-205ENST00000538545 MAGEB18Q96M61 343 aa14.38□□□□□ -0.11
ACTN1-205ENST00000538545 SRPK1Q96SB4 655 aaKnown RBP14.38□□□□□ -0.11
ACTN1-205ENST00000538545 CAB39LQ9H9S4 337 aa14.38□□□□□ -0.11
ACTN1-205ENST00000538545 ZFATQ9P243 1243 aa14.38□□□□□ -0.11
ACTN1-205ENST00000538545 ZNF212Q9UDV6 495 aa14.38□□□□□ -0.11
ACTN1-205ENST00000538545 AFF4Q9UHB7 1163 aaKnown RBP14.38□□□□□ -0.11
ACTN1-205ENST00000538545 TRHDEQ9UKU6 1024 aa14.38□□□□□ -0.11
ACTN1-205ENST00000538545 ZFP37Q9Y6Q3 630 aaPredicted RBP14.38□□□□□ -0.11
ACTN1-205ENST00000538545 ABLIM3O94929 683 aa14.37□□□□□ -0.11
ACTN1-205ENST00000538545 CD86P42081 329 aa14.37□□□□□ -0.11
ACTN1-205ENST00000538545 DSG1Q02413 1049 aa14.37□□□□□ -0.11
ACTN1-205ENST00000538545 SEPT7Q16181 437 aaKnown RBP14.37□□□□□ -0.11
ACTN1-205ENST00000538545 AFMIDQ63HM1 303 aa14.37□□□□□ -0.11
ACTN1-205ENST00000538545 TXNDC8Q6A555 127 aa14.37□□□□□ -0.11
ACTN1-205ENST00000538545 ITPRIPL1Q6GPH6 555 aa14.37□□□□□ -0.11
ACTN1-205ENST00000538545 PACS1Q6VY07 963 aa14.37□□□□□ -0.11
ACTN1-205ENST00000538545 CERS2Q96G23 380 aa14.37□□□□□ -0.11
ACTN1-205ENST00000538545 SGSM3Q96HU1 749 aa14.37□□□□□ -0.11
ACTN1-205ENST00000538545 TSGA13Q96PP4 275 aa14.37□□□□□ -0.11
ACTN1-205ENST00000538545 SP110Q9HB58 689 aa14.37□□□□□ -0.11
ACTN1-205ENST00000538545 ABCF3Q9NUQ8 709 aa14.37□□□□□ -0.11
ACTN1-205ENST00000538545 FETUBQ9UGM5 382 aa14.37□□□□□ -0.11
ACTN1-205ENST00000538545 RAD54BQ9Y620 910 aa14.37□□□□□ -0.11
ACTN1-205ENST00000538545 SPTBN5Q9NRC6 3674 aaKnown RBP14.37□□□□□ -0.11
ACTN1-205ENST00000538545 LCHNA4D1U4 455 aa14.37□□□□□ -0.11
ACTN1-205ENST00000538545 SNX3O60493 162 aa14.37□□□□□ -0.11
ACTN1-205ENST00000538545 ALDOAP04075 364 aaKnown RBP14.37□□□□□ -0.11
ACTN1-205ENST00000538545 POLBP06746 335 aa14.37□□□□□ -0.11
ACTN1-205ENST00000538545 SLC2A3P11169 496 aa14.37□□□□□ -0.11
ACTN1-205ENST00000538545 TSHRP16473 764 aa14.37□□□□□ -0.11
ACTN1-205ENST00000538545 RHOQP17081 205 aa14.37□□□□□ -0.11
ACTN1-205ENST00000538545 SAT1P21673 171 aa14.37□□□□□ -0.11
ACTN1-205ENST00000538545 TUFMP49411 452 aaKnown RBP14.37□□□□□ -0.11
ACTN1-205ENST00000538545 LIG3P49916 1009 aa14.37□□□□□ -0.11
ACTN1-205ENST00000538545 POLD3Q15054 466 aaPredicted RBP14.37□□□□□ -0.11
ACTN1-205ENST00000538545 ANKRD20A4Q4UJ75 823 aa14.37□□□□□ -0.11
ACTN1-205ENST00000538545 STEAP4Q687X5 459 aa14.37□□□□□ -0.11
ACTN1-205ENST00000538545 DENND5AQ6IQ26 1287 aa14.37□□□□□ -0.11
ACTN1-205ENST00000538545 FBXO46Q6PJ61 603 aaPredicted RBP14.37□□□□□ -0.11
ACTN1-205ENST00000538545 C6orf89Q6UWU4 347 aa14.37□□□□□ -0.11
ACTN1-205ENST00000538545 DNAJB7Q7Z6W7 309 aaPredicted RBP14.37□□□□□ -0.11
ACTN1-205ENST00000538545 PIGWQ7Z7B1 504 aa14.37□□□□□ -0.11
ACTN1-205ENST00000538545 TMEM150AQ86TG1 271 aa14.37□□□□□ -0.11
ACTN1-205ENST00000538545 NDUFAF2Q8N183 169 aa14.37□□□□□ -0.11
ACTN1-205ENST00000538545 ZNF276Q8N554 614 aa14.37□□□□□ -0.11
ACTN1-205ENST00000538545 ARMC2Q8NEN0 867 aa14.37□□□□□ -0.11
ACTN1-205ENST00000538545 PRICKLE1Q96MT3 831 aaPredicted RBP14.37□□□□□ -0.11
ACTN1-205ENST00000538545 PITPNM3Q9BZ71 974 aa14.37□□□□□ -0.11
ACTN1-205ENST00000538545 TMEM248Q9NWD8 314 aa14.37□□□□□ -0.11
ACTN1-205ENST00000538545 DNMT3LQ9UJW3 386 aa14.37□□□□□ -0.11
ACTN1-205ENST00000538545 SMG5Q9UPR3 1016 aaKnown RBP14.37□□□□□ -0.11
ACTN1-205ENST00000538545 ABHD14A-ACY1A0A1B0GW23 586 aa14.37□□□□□ -0.11
ACTN1-205ENST00000538545 TPP1O14773 563 aa14.37□□□□□ -0.11
ACTN1-205ENST00000538545 BUD23O43709 281 aaKnown RBP14.37□□□□□ -0.11
ACTN1-205ENST00000538545 SUN1O94901 812 aa14.37□□□□□ -0.11
ACTN1-205ENST00000538545 URODP06132 367 aa14.37□□□□□ -0.11
ACTN1-205ENST00000538545 CORO1AP31146 461 aaKnown RBP14.37□□□□□ -0.11
ACTN1-205ENST00000538545 ALDH1A3P47895 512 aa14.37□□□□□ -0.11
ACTN1-205ENST00000538545 COG7P83436 770 aa14.37□□□□□ -0.11
ACTN1-205ENST00000538545 RASA2Q15283 850 aa14.37□□□□□ -0.11
ACTN1-205ENST00000538545 STXBP5Q5T5C0 1151 aa14.37□□□□□ -0.11
ACTN1-205ENST00000538545 C10orf67Q8IYJ2 551 aa14.37□□□□□ -0.11
ACTN1-205ENST00000538545 CCDC63Q8NA47 563 aa14.37□□□□□ -0.11
ACTN1-205ENST00000538545 MRGPRX2Q96LB1 330 aa14.37□□□□□ -0.11
ACTN1-205ENST00000538545 SMIM14Q96QK8 99 aa14.37□□□□□ -0.11
ACTN1-205ENST00000538545 TBL1YQ9BQ87 522 aa14.37□□□□□ -0.11
ACTN1-205ENST00000538545 SPON2Q9BUD6 331 aa14.37□□□□□ -0.11
ACTN1-205ENST00000538545 IARS2Q9NSE4 1012 aaKnown RBP14.37□□□□□ -0.11
ACTN1-205ENST00000538545 BACE2Q9Y5Z0 518 aa14.37□□□□□ -0.11
ACTN1-205ENST00000538545 COPEO14579 308 aa14.36□□□□□ -0.11
ACTN1-205ENST00000538545 MTSS1O43312 755 aa14.36□□□□□ -0.11
ACTN1-205ENST00000538545 RAMP2O60895 175 aa14.36□□□□□ -0.11
ACTN1-205ENST00000538545 KRT37O76014 449 aa14.36□□□□□ -0.11
ACTN1-205ENST00000538545 PIRTP0C851 137 aa14.36□□□□□ -0.11
ACTN1-205ENST00000538545 BMP1P13497 986 aa14.36□□□□□ -0.11
ACTN1-205ENST00000538545 SYN1P17600 705 aa14.36□□□□□ -0.11
ACTN1-205ENST00000538545 BGNP21810 368 aa14.36□□□□□ -0.11
ACTN1-205ENST00000538545 PSEN1P49768 467 aa14.36□□□□□ -0.11
ACTN1-205ENST00000538545 CYP4F8P98187 520 aa14.36□□□□□ -0.11
ACTN1-205ENST00000538545 SEPT6Q14141 434 aa14.36□□□□□ -0.11
ACTN1-205ENST00000538545 HECTD3Q5T447 861 aa14.36□□□□□ -0.11
ACTN1-205ENST00000538545 C1orf53Q5VUE5 145 aa14.36□□□□□ -0.11
ACTN1-205ENST00000538545 CES4AQ5XG92 561 aa14.36□□□□□ -0.11
ACTN1-205ENST00000538545 ESRP1Q6NXG1 681 aaKnown RBP14.36□□□□□ -0.11
ACTN1-205ENST00000538545 UMODL1-AS1Q8N2C9 162 aa14.36□□□□□ -0.11
ACTN1-205ENST00000538545 ZNF75CPQ92670 426 aaPredicted RBP14.36□□□□□ -0.11
ACTN1-205ENST00000538545 RMDN2Q96LZ7 410 aa14.36□□□□□ -0.11
ACTN1-205ENST00000538545 TTLL2Q9BWV7 592 aa14.36□□□□□ -0.11
ACTN1-205ENST00000538545 FSD1LQ9BXM9 530 aa14.36□□□□□ -0.11
ACTN1-205ENST00000538545 UNKQ9C0B0 810 aaKnown RBP14.36□□□□□ -0.11
ACTN1-205ENST00000538545 OLA1Q9NTK5 396 aaKnown RBP14.36□□□□□ -0.11
ACTN1-205ENST00000538545 C20orf96Q9NUD7 363 aaPredicted RBP14.36□□□□□ -0.11
ACTN1-205ENST00000538545 SPG21Q9NZD8 308 aa14.36□□□□□ -0.11
ACTN1-205ENST00000538545 SENP1Q9P0U3 644 aa14.36□□□□□ -0.11
ACTN1-205ENST00000538545 IGLV3-10A0A075B6K4 115 aa14.36□□□□□ -0.11
ACTN1-205ENST00000538545 STC2O76061 302 aa14.36□□□□□ -0.11
ACTN1-205ENST00000538545 ALDH1A2O94788 518 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms