RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 PICK1Q9NRD5 415 aa6.83□□□□□ -1.32
USP28-207ENST00000538475 C1orf112Q9NSG2 853 aa6.83□□□□□ -1.32
USP28-207ENST00000538475 GINM1Q9NU53 330 aa6.83□□□□□ -1.32
USP28-207ENST00000538475 HSPBP1Q9NZL4 362 aa6.83□□□□□ -1.32
USP28-207ENST00000538475 PAK5Q9P286 719 aa6.83□□□□□ -1.32
USP28-207ENST00000538475 ANKMY1Q9P2S6 941 aa6.83□□□□□ -1.32
USP28-207ENST00000538475 VTI1BQ9UEU0 232 aa6.83□□□□□ -1.32
USP28-207ENST00000538475 XPO7Q9UIA9 1087 aaKnown RBP6.83□□□□□ -1.32
USP28-207ENST00000538475 ZNRF3Q9ULT6 936 aa6.83□□□□□ -1.32
USP28-207ENST00000538475 ZBTB1Q9Y2K1 713 aa6.83□□□□□ -1.32
USP28-207ENST00000538475 TDRKHQ9Y2W6 561 aaKnown RBP6.83□□□□□ -1.32
USP28-207ENST00000538475 RNF11Q9Y3C5 154 aa6.83□□□□□ -1.32
USP28-207ENST00000538475 IRS2Q9Y4H2 1338 aa6.82□□□□□ -1.32
USP28-207ENST00000538475 NRAPQ86VF7 1730 aa6.82□□□□□ -1.32
USP28-207ENST00000538475 FNDC1Q4ZHG4 1894 aaPredicted RBP6.82□□□□□ -1.32
USP28-207ENST00000538475 LOC100289279A0A1B0GTE1 492 aa6.82□□□□□ -1.32
USP28-207ENST00000538475 ARHGEF35A5YM69 484 aa6.82□□□□□ -1.32
USP28-207ENST00000538475 MEGF11A6BM72 1044 aa6.82□□□□□ -1.32
USP28-207ENST00000538475 LRRIQ4A6NIV6 560 aa6.82□□□□□ -1.32
USP28-207ENST00000538475 FAM159BA6NKW6 160 aa6.82□□□□□ -1.32
USP28-207ENST00000538475 KBTBD13C9JR72 458 aa6.82□□□□□ -1.32
USP28-207ENST00000538475 H0YCG3 227 aa6.82□□□□□ -1.32
USP28-207ENST00000538475 GOLGA8RI6L899 631 aa6.82□□□□□ -1.32
USP28-207ENST00000538475 K7EPI3 171 aa6.82□□□□□ -1.32
USP28-207ENST00000538475 APOC4-APOC2K7ER74 178 aa6.82□□□□□ -1.32
USP28-207ENST00000538475 SNAP23O00161 211 aa6.82□□□□□ -1.32
USP28-207ENST00000538475 ZNF195O14628 629 aa6.82□□□□□ -1.32
USP28-207ENST00000538475 GIPC1O14908 333 aa6.82□□□□□ -1.32
USP28-207ENST00000538475 TLR3O15455 904 aaKnown RBP6.82□□□□□ -1.32
USP28-207ENST00000538475 MSH4O15457 936 aa6.82□□□□□ -1.32
USP28-207ENST00000538475 PAPSS1O43252 624 aaPredicted RBP6.82□□□□□ -1.32
USP28-207ENST00000538475 PSMD10O75832 226 aa6.82□□□□□ -1.32
USP28-207ENST00000538475 CLPXO76031 633 aa6.82□□□□□ -1.32
USP28-207ENST00000538475 STAMBPO95630 424 aa6.82□□□□□ -1.32
USP28-207ENST00000538475 IGHA2P01877 340 aa6.82□□□□□ -1.32
USP28-207ENST00000538475 KRT6AP02538 564 aa6.82□□□□□ -1.32
USP28-207ENST00000538475 APOEP02649 317 aa6.82□□□□□ -1.32
USP28-207ENST00000538475 APOC2P02655 101 aa6.82□□□□□ -1.32
USP28-207ENST00000538475 C1QAP02745 245 aa6.82□□□□□ -1.32
USP28-207ENST00000538475 KRT6BP04259 564 aa6.82□□□□□ -1.32
USP28-207ENST00000538475 CYP11A1P05108 521 aa6.82□□□□□ -1.32
USP28-207ENST00000538475 APOA4P06727 396 aa6.82□□□□□ -1.32
USP28-207ENST00000538475 EEF2P13639 858 aaKnown RBP6.82□□□□□ -1.32
USP28-207ENST00000538475 GLDCP23378 1020 aa6.82□□□□□ -1.32
USP28-207ENST00000538475 PAX3P23760 479 aa6.82□□□□□ -1.32
USP28-207ENST00000538475 TBXAS1P24557 533 aaPredicted RBP6.82□□□□□ -1.32
USP28-207ENST00000538475 PRDX5P30044 214 aa6.82□□□□□ -1.32
USP28-207ENST00000538475 SLC7A1P30825 629 aa6.82□□□□□ -1.32
USP28-207ENST00000538475 RPL22P35268 128 aaKnown RBP6.82□□□□□ -1.32
USP28-207ENST00000538475 ELK3P41970 407 aa6.82□□□□□ -1.32
USP28-207ENST00000538475 STT3AP46977 705 aa6.82□□□□□ -1.32
USP28-207ENST00000538475 GCLMP48507 274 aa6.82□□□□□ -1.32
USP28-207ENST00000538475 SLC5A3P53794 718 aa6.82□□□□□ -1.32
USP28-207ENST00000538475 NME5P56597 212 aa6.82□□□□□ -1.32
USP28-207ENST00000538475 MYL6P60660 151 aa6.82□□□□□ -1.32
USP28-207ENST00000538475 PSMC1P62191 440 aaKnown RBP6.82□□□□□ -1.32
USP28-207ENST00000538475 RPS8P62241 208 aaKnown RBP6.82□□□□□ -1.32
USP28-207ENST00000538475 NOMO3P69849 1222 aa6.82□□□□□ -1.32
USP28-207ENST00000538475 MRPS5P82675 430 aaKnown RBP6.82□□□□□ -1.32
USP28-207ENST00000538475 RHDQ02161 417 aa6.82□□□□□ -1.32
USP28-207ENST00000538475 GABPAQ06546 454 aa6.82□□□□□ -1.32
USP28-207ENST00000538475 GALNT2Q10471 571 aa6.82□□□□□ -1.32
USP28-207ENST00000538475 CDC20Q12834 499 aa6.82□□□□□ -1.32
USP28-207ENST00000538475 DPYSL3Q14195 570 aa6.82□□□□□ -1.32
USP28-207ENST00000538475 KCNJ11Q14654 390 aa6.82□□□□□ -1.32
USP28-207ENST00000538475 NR1D2Q14995 579 aa6.82□□□□□ -1.32
USP28-207ENST00000538475 MAPRE2Q15555 327 aa6.82□□□□□ -1.32
USP28-207ENST00000538475 LSM12Q3MHD2 195 aaKnown RBP6.82□□□□□ -1.32
USP28-207ENST00000538475 BBS9Q3SYG4 887 aa6.82□□□□□ -1.32
USP28-207ENST00000538475 FASTKD1Q53R41 847 aaKnown RBP6.82□□□□□ -1.32
USP28-207ENST00000538475 PRR16Q569H4 304 aa6.82□□□□□ -1.32
USP28-207ENST00000538475 RALGPS1Q5JS13 557 aa6.82□□□□□ -1.32
USP28-207ENST00000538475 C6orf10Q5SRN2 563 aa6.82□□□□□ -1.32
USP28-207ENST00000538475 NANOGP8Q6NSW7 305 aa6.82□□□□□ -1.32
USP28-207ENST00000538475 MFSD7Q6UXD7 560 aa6.82□□□□□ -1.32
USP28-207ENST00000538475 HACD2Q6Y1H2 254 aa6.82□□□□□ -1.32
USP28-207ENST00000538475 DNAJC14Q6Y2X3 702 aaPredicted RBP6.82□□□□□ -1.32
USP28-207ENST00000538475 DENND5BQ6ZUT9 1274 aa6.82□□□□□ -1.32
USP28-207ENST00000538475 FKBP9P1Q75LS8 142 aa6.82□□□□□ -1.32
USP28-207ENST00000538475 OTOP1Q7RTM1 612 aa6.82□□□□□ -1.32
USP28-207ENST00000538475 HPS6Q86YV9 775 aa6.82□□□□□ -1.32
USP28-207ENST00000538475 CAMK1DQ8IU85 385 aa6.82□□□□□ -1.32
USP28-207ENST00000538475 LACC1Q8IV20 430 aa6.82□□□□□ -1.32
USP28-207ENST00000538475 MMAAQ8IVH4 418 aaKnown RBP6.82□□□□□ -1.32
USP28-207ENST00000538475 ANKRD13AQ8IZ07 590 aa6.82□□□□□ -1.32
USP28-207ENST00000538475 TGFBRAP1Q8WUH2 860 aa6.82□□□□□ -1.32
USP28-207ENST00000538475 TFAP2CQ92754 450 aa6.82□□□□□ -1.32
USP28-207ENST00000538475 ASB9Q96DX5 294 aa6.82□□□□□ -1.32
USP28-207ENST00000538475 MYRFLQ96LU7 910 aa6.82□□□□□ -1.32
USP28-207ENST00000538475 RIT2Q99578 217 aa6.82□□□□□ -1.32
USP28-207ENST00000538475 SH3GL1Q99961 368 aa6.82□□□□□ -1.32
USP28-207ENST00000538475 ARPC5LQ9BPX5 153 aa6.82□□□□□ -1.32
USP28-207ENST00000538475 TMEM79Q9BSE2 394 aa6.82□□□□□ -1.32
USP28-207ENST00000538475 NAT9Q9BTE0 207 aa6.82□□□□□ -1.32
USP28-207ENST00000538475 AMNQ9BXJ7 453 aa6.82□□□□□ -1.32
USP28-207ENST00000538475 RPF2Q9H7B2 306 aaKnown RBP6.82□□□□□ -1.32
USP28-207ENST00000538475 RMND5AQ9H871 391 aa6.82□□□□□ -1.32
USP28-207ENST00000538475 CXorf21Q9HAI6 301 aa6.82□□□□□ -1.32
USP28-207ENST00000538475 PRDM16Q9HAZ2 1276 aa6.82□□□□□ -1.32
USP28-207ENST00000538475 KCNQ5Q9NR82 932 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms