RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 BNIPLQ7Z465 357 aa8.86□□□□□ -0.99
DDB1-212ENST00000538470 C14orf80Q86SX3 495 aa8.86□□□□□ -0.99
DDB1-212ENST00000538470 ERICH1Q86X53 443 aa8.86□□□□□ -0.99
DDB1-212ENST00000538470 ZNF677Q86XU0 584 aa8.86□□□□□ -0.99
DDB1-212ENST00000538470 XYLT1Q86Y38 959 aa8.86□□□□□ -0.99
DDB1-212ENST00000538470 ZNF683Q8IZ20 524 aa8.86□□□□□ -0.99
DDB1-212ENST00000538470 PDCD7Q8N8D1 485 aaKnown RBP8.86□□□□□ -0.99
DDB1-212ENST00000538470 ATP11CQ8NB49 1132 aa8.86□□□□□ -0.99
DDB1-212ENST00000538470 TMIEQ8NEW7 156 aa8.86□□□□□ -0.99
DDB1-212ENST00000538470 EPS8L1Q8TE68 723 aa8.86□□□□□ -0.99
DDB1-212ENST00000538470 PPP1R16AQ96I34 528 aa8.86□□□□□ -0.99
DDB1-212ENST00000538470 CNDP2Q96KP4 475 aaKnown RBP8.86□□□□□ -0.99
DDB1-212ENST00000538470 HAPLN3Q96S86 360 aa8.86□□□□□ -0.99
DDB1-212ENST00000538470 TBCBQ99426 244 aa8.86□□□□□ -0.99
DDB1-212ENST00000538470 PSMB7Q99436 277 aa8.86□□□□□ -0.99
DDB1-212ENST00000538470 NAA15Q9BXJ9 866 aaKnown RBP8.86□□□□□ -0.99
DDB1-212ENST00000538470 CEP44Q9C0F1 390 aa8.86□□□□□ -0.99
DDB1-212ENST00000538470 SIK2Q9H0K1 926 aa8.86□□□□□ -0.99
DDB1-212ENST00000538470 NUP62CLQ9H1M0 184 aa8.86□□□□□ -0.99
DDB1-212ENST00000538470 RETREG1Q9H6L5 497 aa8.86□□□□□ -0.99
DDB1-212ENST00000538470 SCUBE2Q9NQ36 999 aa8.86□□□□□ -0.99
DDB1-212ENST00000538470 PLCB1Q9NQ66 1216 aa8.86□□□□□ -0.99
DDB1-212ENST00000538470 DYRK4Q9NR20 520 aa8.86□□□□□ -0.99
DDB1-212ENST00000538470 ARHGAP20Q9P2F6 1191 aa8.86□□□□□ -0.99
DDB1-212ENST00000538470 VPS51Q9UID3 782 aa8.86□□□□□ -0.99
DDB1-212ENST00000538470 SARDHQ9UL12 918 aa8.86□□□□□ -0.99
DDB1-212ENST00000538470 GPSM3Q9Y4H4 160 aa8.86□□□□□ -0.99
DDB1-212ENST00000538470 BAHCC1Q9P281 2608 aa8.85□□□□□ -0.99
DDB1-212ENST00000538470 TDRD6O60522 2096 aaKnown RBP8.85□□□□□ -0.99
DDB1-212ENST00000538470 LAMA5O15230 3695 aa8.85□□□□□ -0.99
DDB1-212ENST00000538470 ILVBLA1L0T0 632 aa8.85□□□□□ -0.99
DDB1-212ENST00000538470 PES1O00541 588 aaKnown RBP8.85□□□□□ -0.99
DDB1-212ENST00000538470 WNT9AO14904 365 aa8.85□□□□□ -0.99
DDB1-212ENST00000538470 CNTN5O94779 1100 aa8.85□□□□□ -0.99
DDB1-212ENST00000538470 TFE3P19532 575 aaPredicted RBP8.85□□□□□ -0.99
DDB1-212ENST00000538470 OR1E1P30953 314 aa8.85□□□□□ -0.99
DDB1-212ENST00000538470 CHRNA3P32297 505 aa8.85□□□□□ -0.99
DDB1-212ENST00000538470 FLT3P36888 993 aa8.85□□□□□ -0.99
DDB1-212ENST00000538470 ETFBP38117 255 aa8.85□□□□□ -0.99
DDB1-212ENST00000538470 RECQLP46063 649 aaPredicted RBP8.85□□□□□ -0.99
DDB1-212ENST00000538470 METAP1P53582 386 aa8.85□□□□□ -0.99
DDB1-212ENST00000538470 SLC20A2Q08357 652 aa8.85□□□□□ -0.99
DDB1-212ENST00000538470 CAMK2BQ13554 666 aa8.85□□□□□ -0.99
DDB1-212ENST00000538470 STAT4Q14765 748 aa8.85□□□□□ -0.99
DDB1-212ENST00000538470 ALFQ53S48 1182 aa8.85□□□□□ -0.99
DDB1-212ENST00000538470 TCP11X2Q5H9J9 407 aa8.85□□□□□ -0.99
DDB1-212ENST00000538470 DHRS13Q6UX07 377 aa8.85□□□□□ -0.99
DDB1-212ENST00000538470 SPATS2Q86XZ4 545 aaKnown RBP8.85□□□□□ -0.99
DDB1-212ENST00000538470 GATAD2AQ86YP4 633 aa8.85□□□□□ -0.99
DDB1-212ENST00000538470 TMEM145Q8NBT3 493 aa8.85□□□□□ -0.99
DDB1-212ENST00000538470 OR2A12Q8NGT7 310 aa8.85□□□□□ -0.99
DDB1-212ENST00000538470 FAM174AQ8TBP5 190 aa8.85□□□□□ -0.99
DDB1-212ENST00000538470 MDM1Q8TC05 714 aa8.85□□□□□ -0.99
DDB1-212ENST00000538470 TSC1Q92574 1164 aa8.85□□□□□ -0.99
DDB1-212ENST00000538470 NXPE2Q96DL1 559 aa8.85□□□□□ -0.99
DDB1-212ENST00000538470 HDAC8Q9BY41 377 aa8.85□□□□□ -0.99
DDB1-212ENST00000538470 STK33Q9BYT3 514 aa8.85□□□□□ -0.99
DDB1-212ENST00000538470 PPARGC1AQ9UBK2 798 aaKnown RBP8.85□□□□□ -0.99
DDB1-212ENST00000538470 IL36AQ9UHA7 158 aa8.85□□□□□ -0.99
DDB1-212ENST00000538470 IGSF10Q6WRI0 2623 aa8.85□□□□□ -0.99
DDB1-212ENST00000538470 FASNP49327 2511 aaKnown RBP8.84□□□□□ -0.99
DDB1-212ENST00000538470 I6L893 689 aaPredicted RBP8.84□□□□□ -0.99
DDB1-212ENST00000538470 PLK4O00444 970 aa8.84□□□□□ -0.99
DDB1-212ENST00000538470 KPNA3O00505 521 aaPredicted RBP8.84□□□□□ -0.99
DDB1-212ENST00000538470 BNIP3LO60238 219 aa8.84□□□□□ -0.99
DDB1-212ENST00000538470 SNAP91O60641 907 aa8.84□□□□□ -0.99
DDB1-212ENST00000538470 CTSLP07711 333 aa8.84□□□□□ -0.99
DDB1-212ENST00000538470 TPM2P07951 284 aa8.84□□□□□ -0.99
DDB1-212ENST00000538470 HNRNPA2B1P22626 353 aaKnown RBP8.84□□□□□ -0.99
DDB1-212ENST00000538470 MAT2AP31153 395 aaKnown RBP8.84□□□□□ -0.99
DDB1-212ENST00000538470 AKT2P31751 481 aa8.84□□□□□ -0.99
DDB1-212ENST00000538470 NUMBP49757 651 aa8.84□□□□□ -0.99
DDB1-212ENST00000538470 SERPINH1P50454 418 aaKnown RBP8.84□□□□□ -0.99
DDB1-212ENST00000538470 NEK3P51956 506 aa8.84□□□□□ -0.99
DDB1-212ENST00000538470 GSCP56915 257 aaPredicted RBP8.84□□□□□ -0.99
DDB1-212ENST00000538470 TAS2R38P59533 333 aa8.84□□□□□ -0.99
DDB1-212ENST00000538470 RNASE9P60153 205 aaKnown RBP8.84□□□□□ -0.99
DDB1-212ENST00000538470 NRG1Q02297 640 aaPredicted RBP8.84□□□□□ -0.99
DDB1-212ENST00000538470 KCNMA1Q12791 1236 aa8.84□□□□□ -0.99
DDB1-212ENST00000538470 ARL13BQ3SXY8 428 aa8.84□□□□□ -0.99
DDB1-212ENST00000538470 HS1BP3Q53T59 392 aa8.84□□□□□ -0.99
DDB1-212ENST00000538470 TAF3Q5VWG9 929 aa8.84□□□□□ -0.99
DDB1-212ENST00000538470 NAA35Q5VZE5 725 aa8.84□□□□□ -0.99
DDB1-212ENST00000538470 KIAA1161Q6NSJ0 714 aa8.84□□□□□ -0.99
DDB1-212ENST00000538470 RETSATQ6NUM9 610 aa8.84□□□□□ -0.99
DDB1-212ENST00000538470 TRIM72Q6ZMU5 477 aa8.84□□□□□ -0.99
DDB1-212ENST00000538470 KANSL1Q7Z3B3 1105 aa8.84□□□□□ -0.99
DDB1-212ENST00000538470 TFAP2DQ7Z6R9 452 aa8.84□□□□□ -0.99
DDB1-212ENST00000538470 NOP9Q86U38 636 aaKnown RBP8.84□□□□□ -0.99
DDB1-212ENST00000538470 HORMAD1Q86X24 394 aa8.84□□□□□ -0.99
DDB1-212ENST00000538470 CACTIN-AS1Q8N1I8 211 aa8.84□□□□□ -0.99
DDB1-212ENST00000538470 EID2Q8N6I1 236 aa8.84□□□□□ -0.99
DDB1-212ENST00000538470 PCDH20Q8N6Y1 951 aaKnown RBP8.84□□□□□ -0.99
DDB1-212ENST00000538470 IFT43Q96FT9 208 aa8.84□□□□□ -0.99
DDB1-212ENST00000538470 GBP4Q96PP9 640 aa8.84□□□□□ -0.99
DDB1-212ENST00000538470 ZYG11BQ9C0D3 744 aa8.84□□□□□ -0.99
DDB1-212ENST00000538470 ANLNQ9NQW6 1124 aa8.84□□□□□ -0.99
DDB1-212ENST00000538470 TMEM59LQ9UK28 342 aa8.84□□□□□ -0.99
DDB1-212ENST00000538470 RALYQ9UKM9 306 aaKnown RBP8.84□□□□□ -0.99
DDB1-212ENST00000538470 A0A087WV48 116 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms