RNA–Protein interactions for RNA: ENST00000538224.1

USP28-206, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-206ENST00000538224 CASP10Q92851 521 aa6.75□□□□□ -1.33
USP28-206ENST00000538224 FBXO32Q969P5 355 aa6.75□□□□□ -1.33
USP28-206ENST00000538224 MCUR1Q96AQ8 359 aa6.75□□□□□ -1.33
USP28-206ENST00000538224 THOC1Q96FV9 657 aaKnown RBP6.75□□□□□ -1.33
USP28-206ENST00000538224 SLC39A13Q96H72 371 aa6.75□□□□□ -1.33
USP28-206ENST00000538224 BTN2A3PQ96KV6 586 aa6.75□□□□□ -1.33
USP28-206ENST00000538224 SPATA17Q96L03 361 aa6.75□□□□□ -1.33
USP28-206ENST00000538224 FCRL2Q96LA5 508 aaPredicted RBP6.75□□□□□ -1.33
USP28-206ENST00000538224 RANBP9Q96S59 729 aa6.75□□□□□ -1.33
USP28-206ENST00000538224 GPR22Q99680 433 aa6.75□□□□□ -1.33
USP28-206ENST00000538224 GORASP1Q9BQQ3 440 aa6.75□□□□□ -1.33
USP28-206ENST00000538224 MLPHQ9BV36 600 aaPredicted RBP6.75□□□□□ -1.33
USP28-206ENST00000538224 ZYG11BQ9C0D3 744 aa6.75□□□□□ -1.33
USP28-206ENST00000538224 SIK2Q9H0K1 926 aa6.75□□□□□ -1.33
USP28-206ENST00000538224 RHOJQ9H4E5 214 aa6.75□□□□□ -1.33
USP28-206ENST00000538224 STARD7Q9NQZ5 370 aa6.75□□□□□ -1.33
USP28-206ENST00000538224 C20orf96Q9NUD7 363 aaPredicted RBP6.75□□□□□ -1.33
USP28-206ENST00000538224 MRGBPQ9NV56 204 aa6.75□□□□□ -1.33
USP28-206ENST00000538224 TMEM248Q9NWD8 314 aa6.75□□□□□ -1.33
USP28-206ENST00000538224 IL37Q9NZH6 218 aa6.75□□□□□ -1.33
USP28-206ENST00000538224 COPG2Q9UBF2 871 aa6.75□□□□□ -1.33
USP28-206ENST00000538224 IPO11Q9UI26 975 aaKnown RBP6.75□□□□□ -1.33
USP28-206ENST00000538224 HAO1Q9UJM8 370 aa6.75□□□□□ -1.33
USP28-206ENST00000538224 TLK1Q9UKI8 766 aa6.75□□□□□ -1.33
USP28-206ENST00000538224 LRFN2Q9ULH4 789 aa6.75□□□□□ -1.33
USP28-206ENST00000538224 APOBEC2Q9Y235 224 aaKnown RBP6.75□□□□□ -1.33
USP28-206ENST00000538224 STK38LQ9Y2H1 464 aa6.75□□□□□ -1.33
USP28-206ENST00000538224 TCAF1Q9Y4C2 921 aa6.75□□□□□ -1.33
USP28-206ENST00000538224 CDY1Q9Y6F8 540 aa6.75□□□□□ -1.33
USP28-206ENST00000538224 CHD5Q8TDI0 1954 aa6.75□□□□□ -1.33
USP28-206ENST00000538224 MICAL3Q7RTP6 2002 aa6.74□□□□□ -1.33
USP28-206ENST00000538224 IGLV3-10A0A075B6K4 115 aa6.74□□□□□ -1.33
USP28-206ENST00000538224 A0A087X1B8 175 aa6.74□□□□□ -1.33
USP28-206ENST00000538224 A0A096LPK6 155 aa6.74□□□□□ -1.33
USP28-206ENST00000538224 GOLGA8QA0A0J9YX86 632 aa6.74□□□□□ -1.33
USP28-206ENST00000538224 CCDC195A0A1B0GUA6 201 aa6.74□□□□□ -1.33
USP28-206ENST00000538224 HEATR9A2RTY3 570 aa6.74□□□□□ -1.33
USP28-206ENST00000538224 CARNS1A5YM72 827 aa6.74□□□□□ -1.33
USP28-206ENST00000538224 GOLGA8OA6NCC3 632 aa6.74□□□□□ -1.33
USP28-206ENST00000538224 GOLGA8NF8WBI6 632 aa6.74□□□□□ -1.33
USP28-206ENST00000538224 SLCO1B7G3V0H7 640 aa6.74□□□□□ -1.33
USP28-206ENST00000538224 ARVCFO00192 962 aa6.74□□□□□ -1.33
USP28-206ENST00000538224 PITPNM1O00562 1244 aa6.74□□□□□ -1.33
USP28-206ENST00000538224 FCHO1O14526 889 aa6.74□□□□□ -1.33
USP28-206ENST00000538224 HGSO14964 777 aaPredicted RBP6.74□□□□□ -1.33
USP28-206ENST00000538224 ATP9BO43861 1147 aa6.74□□□□□ -1.33
USP28-206ENST00000538224 MAFKO60675 156 aa6.74□□□□□ -1.33
USP28-206ENST00000538224 SIN3BO75182 1162 aa6.74□□□□□ -1.33
USP28-206ENST00000538224 USP12O75317 370 aa6.74□□□□□ -1.33
USP28-206ENST00000538224 KLHL2O95198 593 aa6.74□□□□□ -1.33
USP28-206ENST00000538224 MOCS2O96007 188 aaPredicted RBP6.74□□□□□ -1.33
USP28-206ENST00000538224 ITGB1P05556 798 aa6.74□□□□□ -1.33
USP28-206ENST00000538224 SERPINA6P08185 405 aa6.74□□□□□ -1.33
USP28-206ENST00000538224 RALBP11234 206 aa6.74□□□□□ -1.33
USP28-206ENST00000538224 FGF3P11487 239 aaPredicted RBP6.74□□□□□ -1.33
USP28-206ENST00000538224 CPB1P15086 417 aa6.74□□□□□ -1.33
USP28-206ENST00000538224 CPA3P15088 417 aa6.74□□□□□ -1.33
USP28-206ENST00000538224 ALOX15P16050 662 aaPredicted RBP6.74□□□□□ -1.33
USP28-206ENST00000538224 HOXB8P17481 243 aaPredicted RBP6.74□□□□□ -1.33
USP28-206ENST00000538224 IGFBP6P24592 240 aaPredicted RBP6.74□□□□□ -1.33
USP28-206ENST00000538224 YWHAQP27348 245 aa6.74□□□□□ -1.33
USP28-206ENST00000538224 CRABP2P29373 138 aa6.74□□□□□ -1.33
USP28-206ENST00000538224 SLC1A6P48664 564 aa6.74□□□□□ -1.33
USP28-206ENST00000538224 MAPKAPK2P49137 400 aa6.74□□□□□ -1.33
USP28-206ENST00000538224 RABGGTBP53611 331 aa6.74□□□□□ -1.33
USP28-206ENST00000538224 AQP5P55064 265 aa6.74□□□□□ -1.33
USP28-206ENST00000538224 MLLT6P55198 1093 aaPredicted RBP6.74□□□□□ -1.33
USP28-206ENST00000538224 YBEYP58557 167 aaPredicted RBP6.74□□□□□ -1.33
USP28-206ENST00000538224 THOC5Q13769 683 aaKnown RBP6.74□□□□□ -1.33
USP28-206ENST00000538224 ZRSR2Q15696 482 aaKnown RBP6.74□□□□□ -1.33
USP28-206ENST00000538224 SLC14A2Q15849 920 aa6.74□□□□□ -1.33
USP28-206ENST00000538224 PARP15Q460N3 678 aa6.74□□□□□ -1.33
USP28-206ENST00000538224 PREPLQ4J6C6 727 aaPredicted RBP6.74□□□□□ -1.33
USP28-206ENST00000538224 PLEKHG4Q58EX7 1191 aa6.74□□□□□ -1.33
USP28-206ENST00000538224 FSCBQ5H9T9 825 aa6.74□□□□□ -1.33
USP28-206ENST00000538224 WLSQ5T9L3 541 aa6.74□□□□□ -1.33
USP28-206ENST00000538224 C6orf163Q5TEZ5 329 aa6.74□□□□□ -1.33
USP28-206ENST00000538224 TMCO4Q5TGY1 634 aa6.74□□□□□ -1.33
USP28-206ENST00000538224 KIAA0930Q6ICG6 404 aaPredicted RBP6.74□□□□□ -1.33
USP28-206ENST00000538224 FSTL4Q6MZW2 842 aa6.74□□□□□ -1.33
USP28-206ENST00000538224 PKN3Q6P5Z2 889 aa6.74□□□□□ -1.33
USP28-206ENST00000538224 TRAF7Q6Q0C0 670 aa6.74□□□□□ -1.33
USP28-206ENST00000538224 ANKS3Q6ZW76 656 aa6.74□□□□□ -1.33
USP28-206ENST00000538224 GALNT7Q86SF2 657 aa6.74□□□□□ -1.33
USP28-206ENST00000538224 CLEC14AQ86T13 490 aa6.74□□□□□ -1.33
USP28-206ENST00000538224 BBS5Q8N3I7 341 aa6.74□□□□□ -1.33
USP28-206ENST00000538224 KIF2BQ8N4N8 673 aa6.74□□□□□ -1.33
USP28-206ENST00000538224 PDZD8Q8NEN9 1154 aa6.74□□□□□ -1.33
USP28-206ENST00000538224 LINC01599Q8WXQ3 324 aa6.74□□□□□ -1.33
USP28-206ENST00000538224 OVCA2Q8WZ82 227 aa6.74□□□□□ -1.33
USP28-206ENST00000538224 SEPT8Q92599 483 aa6.74□□□□□ -1.33
USP28-206ENST00000538224 SLC7A6OSQ96CW6 309 aaPredicted RBP6.74□□□□□ -1.33
USP28-206ENST00000538224 PTCD3Q96EY7 689 aaKnown RBP6.74□□□□□ -1.33
USP28-206ENST00000538224 TSPAN17Q96FV3 270 aa6.74□□□□□ -1.33
USP28-206ENST00000538224 CELF6Q96J87 481 aaKnown RBP6.74□□□□□ -1.33
USP28-206ENST00000538224 VPS39Q96JC1 886 aa6.74□□□□□ -1.33
USP28-206ENST00000538224 TMEM209Q96SK2 561 aa6.74□□□□□ -1.33
USP28-206ENST00000538224 TRIM56Q9BRZ2 755 aaKnown RBP6.74□□□□□ -1.33
USP28-206ENST00000538224 BTBD10Q9BSF8 475 aa6.74□□□□□ -1.33
USP28-206ENST00000538224 MECRQ9BV79 373 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms