RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 ZNF783Q6ZMS7 281 aa15.97■□□□□ 0.15
SFSWAP-206ENST00000537582 CCDC117Q8IWD4 279 aaPredicted RBP15.97■□□□□ 0.15
SFSWAP-206ENST00000537582 SLC44A3Q8N4M1 653 aa15.97■□□□□ 0.15
SFSWAP-206ENST00000537582 CPA6Q8N4T0 437 aa15.97■□□□□ 0.15
SFSWAP-206ENST00000537582 MAML1Q92585 1016 aa15.97■□□□□ 0.15
SFSWAP-206ENST00000537582 RUNDC3BQ96NL0 473 aa15.97■□□□□ 0.15
SFSWAP-206ENST00000537582 AGAP3Q96P47 875 aa15.97■□□□□ 0.15
SFSWAP-206ENST00000537582 BRD8Q9H0E9 1235 aa15.97■□□□□ 0.15
SFSWAP-206ENST00000537582 BRD9Q9H8M2 597 aa15.97■□□□□ 0.15
SFSWAP-206ENST00000537582 PCDH9Q9HC56 1237 aa15.97■□□□□ 0.15
SFSWAP-206ENST00000537582 ASIC3Q9UHC3 531 aa15.97■□□□□ 0.15
SFSWAP-206ENST00000537582 FBXO10Q9UK96 956 aa15.97■□□□□ 0.15
SFSWAP-206ENST00000537582 CHD5Q8TDI0 1954 aa15.97■□□□□ 0.15
SFSWAP-206ENST00000537582 SHROOM3Q8TF72 1996 aa15.97■□□□□ 0.15
SFSWAP-206ENST00000537582 A0A0A0MRY4 1105 aa15.96■□□□□ 0.15
SFSWAP-206ENST00000537582 CFAP69A5D8W1 941 aa15.96■□□□□ 0.15
SFSWAP-206ENST00000537582 C5orf60A6NFR6 353 aa15.96■□□□□ 0.15
SFSWAP-206ENST00000537582 K7ERQ8 282 aa15.96■□□□□ 0.15
SFSWAP-206ENST00000537582 ZBTB24O43167 697 aaPredicted RBP15.96■□□□□ 0.15
SFSWAP-206ENST00000537582 NARSO43776 548 aaKnown RBP15.96■□□□□ 0.15
SFSWAP-206ENST00000537582 GJB3O75712 270 aa15.96■□□□□ 0.15
SFSWAP-206ENST00000537582 METTL18O95568 372 aa15.96■□□□□ 0.15
SFSWAP-206ENST00000537582 MT-CO1P00395 513 aa15.96■□□□□ 0.15
SFSWAP-206ENST00000537582 IVDP26440 423 aa15.96■□□□□ 0.15
SFSWAP-206ENST00000537582 STIP1P31948 543 aaKnown RBP15.96■□□□□ 0.15
SFSWAP-206ENST00000537582 CD68P34810 354 aaPredicted RBP15.96■□□□□ 0.15
SFSWAP-206ENST00000537582 OPRD1P41143 372 aa15.96■□□□□ 0.15
SFSWAP-206ENST00000537582 RPL21P46778 160 aaKnown RBP15.96■□□□□ 0.15
SFSWAP-206ENST00000537582 IFI35P80217 286 aaPredicted RBP15.96■□□□□ 0.15
SFSWAP-206ENST00000537582 LMNB2Q03252 620 aa15.96■□□□□ 0.15
SFSWAP-206ENST00000537582 GPS1Q13098 491 aa15.96■□□□□ 0.15
SFSWAP-206ENST00000537582 ANKRD20A2Q5SQ80 823 aa15.96■□□□□ 0.15
SFSWAP-206ENST00000537582 ANKRD20A1Q5TYW2 823 aa15.96■□□□□ 0.15
SFSWAP-206ENST00000537582 ANKRD20A3Q5VUR7 823 aa15.96■□□□□ 0.15
SFSWAP-206ENST00000537582 DUPD1Q68J44 220 aa15.96■□□□□ 0.15
SFSWAP-206ENST00000537582 ADIPOR2Q86V24 386 aa15.96■□□□□ 0.15
SFSWAP-206ENST00000537582 PGBD5Q8N414 524 aa15.96■□□□□ 0.15
SFSWAP-206ENST00000537582 CASKIN2Q8WXE0 1202 aa15.96■□□□□ 0.15
SFSWAP-206ENST00000537582 SORCS1Q8WY21 1168 aa15.96■□□□□ 0.15
SFSWAP-206ENST00000537582 SPATA13Q96N96 652 aa15.96■□□□□ 0.15
SFSWAP-206ENST00000537582 ERP44Q9BS26 406 aa15.96■□□□□ 0.15
SFSWAP-206ENST00000537582 EPB41L5Q9HCM4 733 aa15.96■□□□□ 0.15
SFSWAP-206ENST00000537582 TTC24A2A3L6 582 aaPredicted RBP15.96■□□□□ 0.14
SFSWAP-206ENST00000537582 BHMG1C9JSJ3 638 aaPredicted RBP15.96■□□□□ 0.14
SFSWAP-206ENST00000537582 MUSKO15146 869 aa15.96■□□□□ 0.14
SFSWAP-206ENST00000537582 GCATO75600 419 aa15.96■□□□□ 0.14
SFSWAP-206ENST00000537582 HLA-DQB2P05538 268 aa15.96■□□□□ 0.14
SFSWAP-206ENST00000537582 DGKGP49619 791 aa15.96■□□□□ 0.14
SFSWAP-206ENST00000537582 STK19P49842 368 aaPredicted RBP15.96■□□□□ 0.14
SFSWAP-206ENST00000537582 MAXP61244 160 aa15.96■□□□□ 0.14
SFSWAP-206ENST00000537582 ITPRIPL2Q3MIP1 535 aa15.96■□□□□ 0.14
SFSWAP-206ENST00000537582 GLE1Q53GS7 698 aaKnown RBP15.96■□□□□ 0.14
SFSWAP-206ENST00000537582 TIGD7Q6NT04 549 aaPredicted RBP15.96■□□□□ 0.14
SFSWAP-206ENST00000537582 LRRC49Q8IUZ0 686 aa15.96■□□□□ 0.14
SFSWAP-206ENST00000537582 DCAF4L2Q8NA75 395 aa15.96■□□□□ 0.14
SFSWAP-206ENST00000537582 NXPE3Q969Y0 559 aa15.96■□□□□ 0.14
SFSWAP-206ENST00000537582 IL12RB2Q99665 862 aa15.96■□□□□ 0.14
SFSWAP-206ENST00000537582 GORASP1Q9BQQ3 440 aa15.96■□□□□ 0.14
SFSWAP-206ENST00000537582 FBRSL1Q9HCM7 1045 aaKnown RBP15.96■□□□□ 0.14
SFSWAP-206ENST00000537582 RBM22Q9NW64 420 aaKnown RBP eCLIP15.96■□□□□ 0.14
SFSWAP-206ENST00000537582 KLHL8Q9P2G9 620 aaPredicted RBP15.96■□□□□ 0.14
SFSWAP-206ENST00000537582 FEZ2Q9UHY8 353 aaPredicted RBP15.96■□□□□ 0.14
SFSWAP-206ENST00000537582 TTLL3Q9Y4R7 772 aa15.96■□□□□ 0.14
SFSWAP-206ENST00000537582 TP73O15350 636 aa15.95■□□□□ 0.14
SFSWAP-206ENST00000537582 ADCY8P40145 1251 aa15.95■□□□□ 0.14
SFSWAP-206ENST00000537582 PLK1P53350 603 aa15.95■□□□□ 0.14
SFSWAP-206ENST00000537582 ZNF33AQ06730 810 aa15.95■□□□□ 0.14
SFSWAP-206ENST00000537582 LBRQ14739 615 aaKnown RBP15.95■□□□□ 0.14
SFSWAP-206ENST00000537582 CYTH1Q15438 398 aa15.95■□□□□ 0.14
SFSWAP-206ENST00000537582 P3H1Q32P28 736 aa15.95■□□□□ 0.14
SFSWAP-206ENST00000537582 TEX44Q53QW1 395 aa15.95■□□□□ 0.14
SFSWAP-206ENST00000537582 SYDE1Q6ZW31 735 aaPredicted RBP15.95■□□□□ 0.14
SFSWAP-206ENST00000537582 PID1Q7Z2X4 250 aa15.95■□□□□ 0.14
SFSWAP-206ENST00000537582 KIAA0907Q7Z7F0 614 aaPredicted RBP15.95■□□□□ 0.14
SFSWAP-206ENST00000537582 RNF135Q8IUD6 432 aa15.95■□□□□ 0.14
SFSWAP-206ENST00000537582 GSPT2Q8IYD1 628 aaKnown RBP15.95■□□□□ 0.14
SFSWAP-206ENST00000537582 PLCD3Q8N3E9 789 aa15.95■□□□□ 0.14
SFSWAP-206ENST00000537582 PHTF2Q8N3S3 785 aa15.95■□□□□ 0.14
SFSWAP-206ENST00000537582 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.95■□□□□ 0.14
SFSWAP-206ENST00000537582 RPL10LQ96L21 214 aaKnown RBP15.95■□□□□ 0.14
SFSWAP-206ENST00000537582 XPO6Q96QU8 1125 aaKnown RBP15.95■□□□□ 0.14
SFSWAP-206ENST00000537582 SLC2A11Q9BYW1 496 aa15.95■□□□□ 0.14
SFSWAP-206ENST00000537582 NT5MQ9NPB1 228 aa15.95■□□□□ 0.14
SFSWAP-206ENST00000537582 GRHL1Q9NZI5 618 aa15.95■□□□□ 0.14
SFSWAP-206ENST00000537582 UBA2Q9UBT2 640 aaPredicted RBP15.95■□□□□ 0.14
SFSWAP-206ENST00000537582 FCF1Q9Y324 198 aaKnown RBP15.95■□□□□ 0.14
SFSWAP-206ENST00000537582 UTP11Q9Y3A2 253 aaKnown RBP15.95■□□□□ 0.14
SFSWAP-206ENST00000537582 TICRRQ7Z2Z1 1910 aa15.94■□□□□ 0.14
SFSWAP-206ENST00000537582 COL4A2P08572 1712 aa15.94■□□□□ 0.14
SFSWAP-206ENST00000537582 LOC730098B7Z3J9 87 aa15.94■□□□□ 0.14
SFSWAP-206ENST00000537582 PRRT4C9JH25 899 aa15.94■□□□□ 0.14
SFSWAP-206ENST00000537582 SMAD6O43541 496 aaKnown RBP15.94■□□□□ 0.14
SFSWAP-206ENST00000537582 NFKB1P19838 968 aa15.94■□□□□ 0.14
SFSWAP-206ENST00000537582 PSMB4P28070 264 aa15.94■□□□□ 0.14
SFSWAP-206ENST00000537582 RGRP47804 291 aa15.94■□□□□ 0.14
SFSWAP-206ENST00000537582 CARSP49589 748 aaKnown RBP15.94■□□□□ 0.14
SFSWAP-206ENST00000537582 TMCO4Q5TGY1 634 aa15.94■□□□□ 0.14
SFSWAP-206ENST00000537582 MARC1Q5VT66 337 aa15.94■□□□□ 0.14
SFSWAP-206ENST00000537582 ANKRD22Q5VYY1 191 aa15.94■□□□□ 0.14
SFSWAP-206ENST00000537582 MBLAC2Q68D91 279 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms