RNA–Protein interactions for RNA: ENST00000537064.5

POLE-210, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 1 (best)

Gene POLE, Length 8,011 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-210	ENST00000537064	SUPT20HL2	P0C7V6	817 aa		10.88	□□□□□ -0.67
POLE-210	ENST00000537064	SNHG28	P0DPA3	235 aa		10.88	□□□□□ -0.67
POLE-210	ENST00000537064	MTA1	Q13330	715 aa		10.88	□□□□□ -0.67
POLE-210	ENST00000537064	PDZK1	Q5T2W1	519 aa		10.88	□□□□□ -0.67
POLE-210	ENST00000537064	AMIGO2	Q86SJ2	522 aa		10.88	□□□□□ -0.67
POLE-210	ENST00000537064	C10orf107	Q8IVU9	208 aa		10.88	□□□□□ -0.67
POLE-210	ENST00000537064	MCRS1	Q96EZ8	462 aa		10.88	□□□□□ -0.67
POLE-210	ENST00000537064	SMPD3	Q9NY59	655 aa	Predicted RBP	10.88	□□□□□ -0.67
POLE-210	ENST00000537064	STOML2	Q9UJZ1	356 aa		10.88	□□□□□ -0.67
POLE-210	ENST00000537064	PHF24	Q9UPV7	400 aa		10.88	□□□□□ -0.67
POLE-210	ENST00000537064	BCL9	O00512	1426 aa		10.88	□□□□□ -0.67
POLE-210	ENST00000537064	ZNF197	O14709	1029 aa		10.88	□□□□□ -0.67
POLE-210	ENST00000537064	HBP1	O60381	514 aa		10.88	□□□□□ -0.67
POLE-210	ENST00000537064	TADA2A	O75478	443 aa		10.88	□□□□□ -0.67
POLE-210	ENST00000537064	LBP	P18428	481 aa		10.88	□□□□□ -0.67
POLE-210	ENST00000537064	RBL1	P28749	1068 aa		10.88	□□□□□ -0.67
POLE-210	ENST00000537064	GRK3	P35626	688 aa		10.88	□□□□□ -0.67
POLE-210	ENST00000537064	SERPINH1	P50454	418 aa	Known RBP	10.88	□□□□□ -0.67
POLE-210	ENST00000537064	TAS2R40	P59535	323 aa		10.88	□□□□□ -0.67
POLE-210	ENST00000537064	TSN	Q15631	228 aa	Known RBP	10.88	□□□□□ -0.67
POLE-210	ENST00000537064	OTUD3	Q5T2D3	398 aa	Predicted RBP	10.88	□□□□□ -0.67
POLE-210	ENST00000537064	SLC7A14	Q8TBB6	771 aa		10.88	□□□□□ -0.67
POLE-210	ENST00000537064	SPATA33	Q96N06	139 aa		10.88	□□□□□ -0.67
POLE-210	ENST00000537064	CLEC4M	Q9H2X3	399 aa	Predicted RBP	10.88	□□□□□ -0.67
POLE-210	ENST00000537064	RPAP3	Q9H6T3	665 aa	Predicted RBP	10.88	□□□□□ -0.67
POLE-210	ENST00000537064	EMC3	Q9P0I2	261 aa		10.88	□□□□□ -0.67
POLE-210	ENST00000537064	USP21	Q9UK80	565 aa		10.88	□□□□□ -0.67
POLE-210	ENST00000537064	UBR7	Q8N806	425 aa		10.87	□□□□□ -0.67
POLE-210	ENST00000537064	NIPA2	Q8N8Q9	360 aa		10.87	□□□□□ -0.67
POLE-210	ENST00000537064	CPT1B	Q92523	772 aa		10.87	□□□□□ -0.67
POLE-210	ENST00000537064	MYDGF	Q969H8	173 aa		10.87	□□□□□ -0.67
POLE-210	ENST00000537064	ANKH	Q9HCJ1	492 aa		10.87	□□□□□ -0.67
POLE-210	ENST00000537064	ZSCAN9	O15535	394 aa	Predicted RBP	10.87	□□□□□ -0.67
POLE-210	ENST00000537064	IREB2	P48200	963 aa	Known RBP	10.87	□□□□□ -0.67
POLE-210	ENST00000537064	SPIRE1	Q08AE8	756 aa		10.87	□□□□□ -0.67
POLE-210	ENST00000537064	NADK2	Q4G0N4	442 aa		10.87	□□□□□ -0.67
POLE-210	ENST00000537064	C6orf52	Q5T4I8	152 aa		10.87	□□□□□ -0.67
POLE-210	ENST00000537064	PSTK	Q8IV42	348 aa	Known RBP	10.87	□□□□□ -0.67
POLE-210	ENST00000537064	PRRG3	Q9BZD7	231 aa		10.87	□□□□□ -0.67
POLE-210	ENST00000537064	FAM49B	Q9NUQ9	324 aa		10.87	□□□□□ -0.67
POLE-210	ENST00000537064	DPP3	Q9NY33	737 aa		10.87	□□□□□ -0.67
POLE-210	ENST00000537064	PRKAG2	Q9UGJ0	569 aa		10.87	□□□□□ -0.67
POLE-210	ENST00000537064	MAGEL2	Q9UJ55	1249 aa		10.87	□□□□□ -0.67
POLE-210	ENST00000537064	NR2E1	Q9Y466	385 aa		10.87	□□□□□ -0.67
POLE-210	ENST00000537064	CCDC189	A1A4V9	331 aa		10.87	□□□□□ -0.67
POLE-210	ENST00000537064	MEIS2	O14770	477 aa		10.87	□□□□□ -0.67
POLE-210	ENST00000537064	VPS26A	O75436	327 aa		10.87	□□□□□ -0.67
POLE-210	ENST00000537064	PCSK1	P29120	753 aa		10.87	□□□□□ -0.67
POLE-210	ENST00000537064	ECHS1	P30084	290 aa		10.87	□□□□□ -0.67
POLE-210	ENST00000537064	SHMT1	P34896	483 aa		10.87	□□□□□ -0.67
POLE-210	ENST00000537064	MTX3	Q5HYI7	312 aa		10.87	□□□□□ -0.67
POLE-210	ENST00000537064	LZTR1	Q8N653	840 aa		10.87	□□□□□ -0.67
POLE-210	ENST00000537064	ENKUR	Q8TC29	256 aa		10.87	□□□□□ -0.67
POLE-210	ENST00000537064	CENPN	Q96H22	339 aa	Predicted RBP	10.87	□□□□□ -0.67
POLE-210	ENST00000537064	PCDHB18P	Q96TA0	734 aa		10.87	□□□□□ -0.67
POLE-210	ENST00000537064	EHD1	Q9H4M9	534 aa		10.87	□□□□□ -0.67
POLE-210	ENST00000537064	ASB7	Q9H672	318 aa		10.87	□□□□□ -0.67
POLE-210	ENST00000537064	TRIM43B	A6NCK2	446 aa		10.87	□□□□□ -0.67
POLE-210	ENST00000537064	AVPR1A	P37288	418 aa		10.87	□□□□□ -0.67
POLE-210	ENST00000537064	FUT11	Q495W5	492 aa		10.87	□□□□□ -0.67
POLE-210	ENST00000537064	MARVELD2	Q8N4S9	558 aa		10.87	□□□□□ -0.67
POLE-210	ENST00000537064	TRMT6	Q9UJA5	497 aa	Known RBP	10.87	□□□□□ -0.67
POLE-210	ENST00000537064	ZBTB11	O95625	1053 aa	Predicted RBP	10.87	□□□□□ -0.67
POLE-210	ENST00000537064	CRTAM	O95727	393 aa		10.87	□□□□□ -0.67
POLE-210	ENST00000537064	SLC6A3	Q01959	620 aa		10.87	□□□□□ -0.67
POLE-210	ENST00000537064	VPS72	Q15906	364 aa		10.87	□□□□□ -0.67
POLE-210	ENST00000537064	CCNYL2	Q5T2Q4	361 aa		10.87	□□□□□ -0.67
POLE-210	ENST00000537064	TRIQK	Q629K1	86 aa		10.87	□□□□□ -0.67
POLE-210	ENST00000537064	ZNF410	Q86VK4	478 aa		10.87	□□□□□ -0.67
POLE-210	ENST00000537064	MECR	Q9BV79	373 aa		10.87	□□□□□ -0.67
POLE-210	ENST00000537064	CACNA2D2	Q9NY47	1150 aa		10.87	□□□□□ -0.67
POLE-210	ENST00000537064	RCOR3	Q9P2K3	495 aa	Predicted RBP	10.87	□□□□□ -0.67
POLE-210	ENST00000537064	MYH9	P35579	1960 aa	Known RBP	10.87	□□□□□ -0.67
POLE-210	ENST00000537064	TCRBV7S2A1N4T	A0A589	114 aa		10.87	□□□□□ -0.67
POLE-210	ENST00000537064	VEGFA	P15692	232 aa	Predicted RBP	10.87	□□□□□ -0.67
POLE-210	ENST00000537064	ALOX12	P18054	663 aa		10.87	□□□□□ -0.67
POLE-210	ENST00000537064	FGFR3	P22607	806 aa		10.87	□□□□□ -0.67
POLE-210	ENST00000537064	TYSND1	Q2T9J0	566 aa		10.87	□□□□□ -0.67
POLE-210	ENST00000537064	CHST13	Q8NET6	341 aa		10.87	□□□□□ -0.67
POLE-210	ENST00000537064	PLEKHO2	Q8TD55	490 aa		10.87	□□□□□ -0.67
POLE-210	ENST00000537064	HPS1	Q92902	700 aa		10.87	□□□□□ -0.67
POLE-210	ENST00000537064	KAT5	Q92993	513 aa		10.87	□□□□□ -0.67
POLE-210	ENST00000537064	DMAC2	Q9NW81	257 aa		10.87	□□□□□ -0.67
POLE-210	ENST00000537064	VAV3	Q9UKW4	847 aa		10.87	□□□□□ -0.67
POLE-210	ENST00000537064	CARD8	Q9Y2G2	431 aa		10.87	□□□□□ -0.67
POLE-210	ENST00000537064	EME2	A4GXA9	379 aa	Predicted RBP	10.86	□□□□□ -0.67
POLE-210	ENST00000537064	LSM1	O15116	133 aa	Known RBP	10.86	□□□□□ -0.67
POLE-210	ENST00000537064	MICAL2	O94851	1124 aa		10.86	□□□□□ -0.67
POLE-210	ENST00000537064	SLC7A1	P30825	629 aa		10.86	□□□□□ -0.67
POLE-210	ENST00000537064	BAAT	Q14032	418 aa	Predicted RBP	10.86	□□□□□ -0.67
POLE-210	ENST00000537064	NOMO1	Q15155	1222 aa		10.86	□□□□□ -0.67
POLE-210	ENST00000537064	MAPK11	Q15759	364 aa		10.86	□□□□□ -0.67
POLE-210	ENST00000537064	RNF148	Q8N7C7	305 aa		10.86	□□□□□ -0.67
POLE-210	ENST00000537064	ANKRD52	Q8NB46	1076 aa		10.86	□□□□□ -0.67
POLE-210	ENST00000537064	CLPTM1L	Q96KA5	538 aa		10.86	□□□□□ -0.67
POLE-210	ENST00000537064	KREMEN1	Q96MU8	473 aa		10.86	□□□□□ -0.67
POLE-210	ENST00000537064	TLE6	Q9H808	572 aa		10.86	□□□□□ -0.67
POLE-210	ENST00000537064	SNX15	Q9NRS6	342 aa		10.86	□□□□□ -0.67
POLE-210	ENST00000537064	CDV3	Q9UKY7	258 aa	Known RBP	10.86	□□□□□ -0.67
POLE-210	ENST00000537064	BTBD19	C9JJ37	291 aa		10.86	□□□□□ -0.67

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