RNA–Protein interactions for RNA: ENST00000536742.5

CCDC60-203, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC60, Length 886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-203ENST00000536742 PCDHA1Q9Y5I3 950 aa7.1□□□□□ -1.27
CCDC60-203ENST00000536742 ICE1Q9Y2F5 2266 aa7.1□□□□□ -1.27
CCDC60-203ENST00000536742 CENPEQ02224 2701 aa7.09□□□□□ -1.27
CCDC60-203ENST00000536742 NAV3Q8IVL0 2385 aa7.09□□□□□ -1.27
CCDC60-203ENST00000536742 MYBPHLA2RUH7 354 aa7.09□□□□□ -1.27
CCDC60-203ENST00000536742 FAM149AA5PLN7 773 aa7.09□□□□□ -1.27
CCDC60-203ENST00000536742 SPECC1L-ADORA2AF8WAN1 911 aa7.09□□□□□ -1.27
CCDC60-203ENST00000536742 PLK4O00444 970 aa7.09□□□□□ -1.27
CCDC60-203ENST00000536742 PRPF3O43395 683 aaKnown RBP7.09□□□□□ -1.27
CCDC60-203ENST00000536742 CBFA2T3O75081 653 aa7.09□□□□□ -1.27
CCDC60-203ENST00000536742 ATP9AO75110 1047 aa7.09□□□□□ -1.27
CCDC60-203ENST00000536742 MBD4O95243 580 aa7.09□□□□□ -1.27
CCDC60-203ENST00000536742 KRT10P13645 584 aa7.09□□□□□ -1.27
CCDC60-203ENST00000536742 MALP21145 153 aa7.09□□□□□ -1.27
CCDC60-203ENST00000536742 FCARP24071 287 aa7.09□□□□□ -1.27
CCDC60-203ENST00000536742 ACTN2P35609 894 aa7.09□□□□□ -1.27
CCDC60-203ENST00000536742 SLC11A1P49279 550 aa7.09□□□□□ -1.27
CCDC60-203ENST00000536742 MAP2K6P52564 334 aa7.09□□□□□ -1.27
CCDC60-203ENST00000536742 CCDC173Q0VFZ6 552 aa7.09□□□□□ -1.27
CCDC60-203ENST00000536742 MTX1Q13505 466 aa7.09□□□□□ -1.27
CCDC60-203ENST00000536742 ZNF267Q14586 743 aaPredicted RBP7.09□□□□□ -1.27
CCDC60-203ENST00000536742 KHDC1Q4VXA5 237 aaKnown RBP7.09□□□□□ -1.27
CCDC60-203ENST00000536742 SRGAP1Q7Z6B7 1085 aa7.09□□□□□ -1.27
CCDC60-203ENST00000536742 TMPRSS12Q86WS5 348 aa7.09□□□□□ -1.27
CCDC60-203ENST00000536742 SLC35B2Q8TB61 432 aa7.09□□□□□ -1.27
CCDC60-203ENST00000536742 STON2Q8WXE9 905 aa7.09□□□□□ -1.27
CCDC60-203ENST00000536742 ING5Q8WYH8 240 aa7.09□□□□□ -1.27
CCDC60-203ENST00000536742 TBC1D5Q92609 795 aa7.09□□□□□ -1.27
CCDC60-203ENST00000536742 MBOAT7Q96N66 472 aa7.09□□□□□ -1.27
CCDC60-203ENST00000536742 DCLRE1CQ96SD1 692 aaKnown RBP7.09□□□□□ -1.27
CCDC60-203ENST00000536742 MNTQ99583 582 aa7.09□□□□□ -1.27
CCDC60-203ENST00000536742 GPR87Q9BY21 358 aa7.09□□□□□ -1.27
CCDC60-203ENST00000536742 REXO4Q9GZR2 422 aaKnown RBP7.09□□□□□ -1.27
CCDC60-203ENST00000536742 TMEM60Q9H2L4 133 aa7.09□□□□□ -1.27
CCDC60-203ENST00000536742 SMARCAD1Q9H4L7 1026 aa7.09□□□□□ -1.27
CCDC60-203ENST00000536742 FAM204AQ9H8W3 233 aa7.09□□□□□ -1.27
CCDC60-203ENST00000536742 TMEM74BQ9NUR3 256 aa7.09□□□□□ -1.27
CCDC60-203ENST00000536742 RLIMQ9NVW2 624 aa7.09□□□□□ -1.27
CCDC60-203ENST00000536742 FEZ2Q9UHY8 353 aaPredicted RBP7.09□□□□□ -1.27
CCDC60-203ENST00000536742 SLC4A4Q9Y6R1 1079 aa7.09□□□□□ -1.27
CCDC60-203ENST00000536742 PHLPP2Q6ZVD8 1323 aa7.08□□□□□ -1.28
CCDC60-203ENST00000536742 ADAMTS9Q9P2N4 1935 aa7.08□□□□□ -1.28
CCDC60-203ENST00000536742 SLC38A8A6NNN8 435 aa7.08□□□□□ -1.28
CCDC60-203ENST00000536742 FAM227AF5H4B4 570 aa7.08□□□□□ -1.28
CCDC60-203ENST00000536742 TRIM24O15164 1050 aa7.08□□□□□ -1.28
CCDC60-203ENST00000536742 MARK3P27448 753 aa7.08□□□□□ -1.28
CCDC60-203ENST00000536742 TCF7P36402 384 aaPredicted RBP7.08□□□□□ -1.28
CCDC60-203ENST00000536742 DGKEP52429 567 aa7.08□□□□□ -1.28
CCDC60-203ENST00000536742 CRYBB1P53674 252 aaPredicted RBP7.08□□□□□ -1.28
CCDC60-203ENST00000536742 PON2Q15165 354 aa7.08□□□□□ -1.28
CCDC60-203ENST00000536742 ARHGAP29Q52LW3 1261 aa7.08□□□□□ -1.28
CCDC60-203ENST00000536742 ANKS6Q68DC2 871 aa7.08□□□□□ -1.28
CCDC60-203ENST00000536742 FAM228AQ86W67 206 aa7.08□□□□□ -1.28
CCDC60-203ENST00000536742 AOPEPQ8N6M6 819 aa7.08□□□□□ -1.28
CCDC60-203ENST00000536742 SPATA20Q8TB22 786 aa7.08□□□□□ -1.28
CCDC60-203ENST00000536742 LGMNQ99538 433 aa7.08□□□□□ -1.28
CCDC60-203ENST00000536742 ACO2Q99798 780 aaKnown RBP7.08□□□□□ -1.28
CCDC60-203ENST00000536742 TMEM175Q9BSA9 504 aa7.08□□□□□ -1.28
CCDC60-203ENST00000536742 NDC1Q9BTX1 674 aa7.08□□□□□ -1.28
CCDC60-203ENST00000536742 CPEB1Q9BZB8 566 aaKnown RBP7.08□□□□□ -1.28
CCDC60-203ENST00000536742 CPNE5Q9HCH3 593 aa7.08□□□□□ -1.28
CCDC60-203ENST00000536742 STARD5Q9NSY2 213 aa7.08□□□□□ -1.28
CCDC60-203ENST00000536742 TBC1D13Q9NVG8 400 aa7.08□□□□□ -1.28
CCDC60-203ENST00000536742 DACT1Q9NYF0 836 aa7.08□□□□□ -1.28
CCDC60-203ENST00000536742 DNAJB4Q9UDY4 337 aa7.08□□□□□ -1.28
CCDC60-203ENST00000536742 SLC23A1Q9UHI7 598 aa7.08□□□□□ -1.28
CCDC60-203ENST00000536742 PILRBQ9UKJ0 227 aa7.08□□□□□ -1.28
CCDC60-203ENST00000536742 STX8Q9UNK0 236 aa7.08□□□□□ -1.28
CCDC60-203ENST00000536742 TSC22D4Q9Y3Q8 395 aa7.08□□□□□ -1.28
CCDC60-203ENST00000536742 TLN1Q9Y490 2541 aaKnown RBP7.08□□□□□ -1.28
CCDC60-203ENST00000536742 CCL16O15467 120 aa7.07□□□□□ -1.28
CCDC60-203ENST00000536742 GJB3O75712 270 aa7.07□□□□□ -1.28
CCDC60-203ENST00000536742 STAM2O75886 525 aa7.07□□□□□ -1.28
CCDC60-203ENST00000536742 TUSC2O75896 110 aa7.07□□□□□ -1.28
CCDC60-203ENST00000536742 UBXN7O94888 489 aa7.07□□□□□ -1.28
CCDC60-203ENST00000536742 HAUS5O94927 633 aa7.07□□□□□ -1.28
CCDC60-203ENST00000536742 HRGP04196 525 aa7.07□□□□□ -1.28
CCDC60-203ENST00000536742 SFTPCP11686 197 aa7.07□□□□□ -1.28
CCDC60-203ENST00000536742 TNFRSF1AP19438 455 aa7.07□□□□□ -1.28
CCDC60-203ENST00000536742 CCND2P30279 289 aa7.07□□□□□ -1.28
CCDC60-203ENST00000536742 HNF1BP35680 557 aa7.07□□□□□ -1.28
CCDC60-203ENST00000536742 CCDC157Q569K6 752 aa7.07□□□□□ -1.28
CCDC60-203ENST00000536742 NOMO2Q5JPE7 1267 aa7.07□□□□□ -1.28
CCDC60-203ENST00000536742 FAM78AQ5JUQ0 283 aa7.07□□□□□ -1.28
CCDC60-203ENST00000536742 C1QL3Q5VWW1 255 aa7.07□□□□□ -1.28
CCDC60-203ENST00000536742 LMBRD2Q68DH5 695 aaPredicted RBP7.07□□□□□ -1.28
CCDC60-203ENST00000536742 ZNF529Q6P280 563 aa7.07□□□□□ -1.28
CCDC60-203ENST00000536742 VITQ6UXI7 678 aa7.07□□□□□ -1.28
CCDC60-203ENST00000536742 RTL10Q7L3V2 364 aa7.07□□□□□ -1.28
CCDC60-203ENST00000536742 SYT13Q7L8C5 426 aa7.07□□□□□ -1.28
CCDC60-203ENST00000536742 HEATR3Q7Z4Q2 680 aa7.07□□□□□ -1.28
CCDC60-203ENST00000536742 DGKHQ86XP1 1220 aa7.07□□□□□ -1.28
CCDC60-203ENST00000536742 XYLT1Q86Y38 959 aa7.07□□□□□ -1.28
CCDC60-203ENST00000536742 MFSD6LQ8IWD5 586 aa7.07□□□□□ -1.28
CCDC60-203ENST00000536742 ZNF248Q8NDW4 579 aa7.07□□□□□ -1.28
CCDC60-203ENST00000536742 OR10H5Q8NGA6 315 aa7.07□□□□□ -1.28
CCDC60-203ENST00000536742 ZBTB10Q96DT7 871 aa7.07□□□□□ -1.28
CCDC60-203ENST00000536742 CGRRF1Q99675 332 aa7.07□□□□□ -1.28
CCDC60-203ENST00000536742 PACSIN1Q9BY11 444 aa7.07□□□□□ -1.28
CCDC60-203ENST00000536742 KRTAP3-1Q9BYR8 98 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms