RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 B3GALT6Q96L58 329 aa13.62□□□□□ -0.23
VPS33B-202ENST00000535906 FAM193BQ96PV7 902 aaPredicted RBP13.62□□□□□ -0.23
VPS33B-202ENST00000535906 IL12RB2Q99665 862 aa13.62□□□□□ -0.23
VPS33B-202ENST00000535906 MMADHCQ9H3L0 296 aaPredicted RBP13.62□□□□□ -0.23
VPS33B-202ENST00000535906 SNX15Q9NRS6 342 aa13.62□□□□□ -0.23
VPS33B-202ENST00000535906 ZNF358Q9NW07 568 aa13.62□□□□□ -0.23
VPS33B-202ENST00000535906 TMEM216Q9P0N5 145 aa13.62□□□□□ -0.23
VPS33B-202ENST00000535906 SOX13Q9UN79 622 aa13.62□□□□□ -0.23
VPS33B-202ENST00000535906 SCML2Q9UQR0 700 aa13.62□□□□□ -0.23
VPS33B-202ENST00000535906 MATN3O15232 486 aa13.61□□□□□ -0.23
VPS33B-202ENST00000535906 KCNA4P22459 653 aa13.61□□□□□ -0.23
VPS33B-202ENST00000535906 LIMK2P53671 638 aa13.61□□□□□ -0.23
VPS33B-202ENST00000535906 MLLT6P55198 1093 aaPredicted RBP13.61□□□□□ -0.23
VPS33B-202ENST00000535906 STX3Q13277 289 aa13.61□□□□□ -0.23
VPS33B-202ENST00000535906 DBN1Q16643 649 aa13.61□□□□□ -0.23
VPS33B-202ENST00000535906 PIK3R6Q5UE93 754 aa13.61□□□□□ -0.23
VPS33B-202ENST00000535906 MBLAC2Q68D91 279 aa13.61□□□□□ -0.23
VPS33B-202ENST00000535906 RINLQ6ZS11 566 aa13.61□□□□□ -0.23
VPS33B-202ENST00000535906 KCNMB4Q86W47 210 aa13.61□□□□□ -0.23
VPS33B-202ENST00000535906 CRLF3Q8IUI8 442 aa13.61□□□□□ -0.23
VPS33B-202ENST00000535906 LZTR1Q8N653 840 aa13.61□□□□□ -0.23
VPS33B-202ENST00000535906 SLC43A3Q8NBI5 491 aa13.61□□□□□ -0.23
VPS33B-202ENST00000535906 ATAD1Q8NBU5 361 aa13.61□□□□□ -0.23
VPS33B-202ENST00000535906 CFAP61Q8NHU2 1237 aa13.61□□□□□ -0.23
VPS33B-202ENST00000535906 FUBP3Q96I24 572 aaKnown RBP eCLIP13.61□□□□□ -0.23
VPS33B-202ENST00000535906 SERPINB11Q96P15 392 aa13.61□□□□□ -0.23
VPS33B-202ENST00000535906 WWP1Q9H0M0 922 aa13.61□□□□□ -0.23
VPS33B-202ENST00000535906 STARD7Q9NQZ5 370 aa13.61□□□□□ -0.23
VPS33B-202ENST00000535906 C20orf96Q9NUD7 363 aaPredicted RBP13.61□□□□□ -0.23
VPS33B-202ENST00000535906 TAS2R1Q9NYW7 299 aa13.61□□□□□ -0.23
VPS33B-202ENST00000535906 LRRC42Q9Y546 428 aa13.61□□□□□ -0.23
VPS33B-202ENST00000535906 ITM2AO43736 263 aa13.61□□□□□ -0.23
VPS33B-202ENST00000535906 FGF3P11487 239 aaPredicted RBP13.61□□□□□ -0.23
VPS33B-202ENST00000535906 HTR7P34969 479 aa13.61□□□□□ -0.23
VPS33B-202ENST00000535906 SPRP35270 261 aaPredicted RBP13.61□□□□□ -0.23
VPS33B-202ENST00000535906 PCLAFQ15004 111 aa13.61□□□□□ -0.23
VPS33B-202ENST00000535906 NFE2Q16621 373 aaPredicted RBP13.61□□□□□ -0.23
VPS33B-202ENST00000535906 RAET1EQ8TD07 263 aa13.61□□□□□ -0.23
VPS33B-202ENST00000535906 ISL2Q96A47 359 aa13.61□□□□□ -0.23
VPS33B-202ENST00000535906 SLC39A13Q96H72 371 aa13.61□□□□□ -0.23
VPS33B-202ENST00000535906 C8orf48Q96LL4 319 aa13.61□□□□□ -0.23
VPS33B-202ENST00000535906 FCRL5Q96RD9 977 aa13.61□□□□□ -0.23
VPS33B-202ENST00000535906 GLOD4Q9HC38 313 aa13.61□□□□□ -0.23
VPS33B-202ENST00000535906 AAR2Q9Y312 384 aaKnown RBP13.61□□□□□ -0.23
VPS33B-202ENST00000535906 CAPN14A8MX76 684 aa13.6□□□□□ -0.23
VPS33B-202ENST00000535906 TRPA1O75762 1119 aa13.6□□□□□ -0.23
VPS33B-202ENST00000535906 SOAT2O75908 522 aa13.6□□□□□ -0.23
VPS33B-202ENST00000535906 PROCP04070 461 aa13.6□□□□□ -0.23
VPS33B-202ENST00000535906 ATP5BP06576 529 aaKnown RBP13.6□□□□□ -0.23
VPS33B-202ENST00000535906 MAGEA12P43365 314 aa13.6□□□□□ -0.23
VPS33B-202ENST00000535906 PAPOLAP51003 745 aaKnown RBP13.6□□□□□ -0.23
VPS33B-202ENST00000535906 NAA25Q14CX7 972 aa13.6□□□□□ -0.23
VPS33B-202ENST00000535906 TAF11Q15544 211 aa13.6□□□□□ -0.23
VPS33B-202ENST00000535906 DLG2Q15700 870 aa13.6□□□□□ -0.23
VPS33B-202ENST00000535906 INSCQ1MX18 579 aa13.6□□□□□ -0.23
VPS33B-202ENST00000535906 CTXN3Q4LDR2 81 aa13.6□□□□□ -0.23
VPS33B-202ENST00000535906 KHDC1Q4VXA5 237 aaKnown RBP13.6□□□□□ -0.23
VPS33B-202ENST00000535906 AFMIDQ63HM1 303 aa13.6□□□□□ -0.23
VPS33B-202ENST00000535906 LINC00523Q86TU6 105 aa13.6□□□□□ -0.23
VPS33B-202ENST00000535906 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.6□□□□□ -0.23
VPS33B-202ENST00000535906 PLD6Q8N2A8 252 aaKnown RBP13.6□□□□□ -0.23
VPS33B-202ENST00000535906 RTL3Q8N8U3 475 aaKnown RBP13.6□□□□□ -0.23
VPS33B-202ENST00000535906 ACVR1CQ8NER5 493 aa13.6□□□□□ -0.23
VPS33B-202ENST00000535906 IPMKQ8NFU5 416 aa13.6□□□□□ -0.23
VPS33B-202ENST00000535906 MCUR1Q96AQ8 359 aa13.6□□□□□ -0.23
VPS33B-202ENST00000535906 MCMBPQ9BTE3 642 aa13.6□□□□□ -0.23
VPS33B-202ENST00000535906 KIFC1Q9BW19 673 aa13.6□□□□□ -0.23
VPS33B-202ENST00000535906 GPR62Q9BZJ7 368 aa13.6□□□□□ -0.23
VPS33B-202ENST00000535906 CAB39LQ9H9S4 337 aa13.6□□□□□ -0.23
VPS33B-202ENST00000535906 IARS2Q9NSE4 1012 aaKnown RBP13.6□□□□□ -0.23
VPS33B-202ENST00000535906 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.6□□□□□ -0.23
VPS33B-202ENST00000535906 THAP1Q9NVV9 213 aa13.6□□□□□ -0.23
VPS33B-202ENST00000535906 GMIPQ9P107 970 aa13.6□□□□□ -0.23
VPS33B-202ENST00000535906 ARMCX1Q9P291 453 aa13.6□□□□□ -0.23
VPS33B-202ENST00000535906 TLR6Q9Y2C9 796 aa13.6□□□□□ -0.23
VPS33B-202ENST00000535906 H0Y3Z8 333 aa13.6□□□□□ -0.23
VPS33B-202ENST00000535906 LYPLA1O75608 230 aaPredicted RBP13.6□□□□□ -0.23
VPS33B-202ENST00000535906 TBX18O95935 607 aa13.6□□□□□ -0.23
VPS33B-202ENST00000535906 HLA-DQB2P05538 268 aa13.6□□□□□ -0.23
VPS33B-202ENST00000535906 GATMP50440 423 aa13.6□□□□□ -0.23
VPS33B-202ENST00000535906 AQP5P55064 265 aa13.6□□□□□ -0.23
VPS33B-202ENST00000535906 MPP3Q13368 585 aa13.6□□□□□ -0.23
VPS33B-202ENST00000535906 GPNMBQ14956 572 aa13.6□□□□□ -0.23
VPS33B-202ENST00000535906 FAM171A1Q5VUB5 890 aa13.6□□□□□ -0.23
VPS33B-202ENST00000535906 DENND5AQ6IQ26 1287 aa13.6□□□□□ -0.23
VPS33B-202ENST00000535906 ATG14Q6ZNE5 492 aa13.6□□□□□ -0.23
VPS33B-202ENST00000535906 C10orf107Q8IVU9 208 aa13.6□□□□□ -0.23
VPS33B-202ENST00000535906 PPP1R14CQ8TAE6 165 aa13.6□□□□□ -0.23
VPS33B-202ENST00000535906 NAF1Q96HR8 494 aaKnown RBP13.6□□□□□ -0.23
VPS33B-202ENST00000535906 C1orf74Q96LT6 269 aa13.6□□□□□ -0.23
VPS33B-202ENST00000535906 TBL1YQ9BQ87 522 aa13.6□□□□□ -0.23
VPS33B-202ENST00000535906 TSEN34Q9BSV6 310 aaKnown RBP13.6□□□□□ -0.23
VPS33B-202ENST00000535906 FBXO44Q9H4M3 255 aa13.6□□□□□ -0.23
VPS33B-202ENST00000535906 NOL6Q9H6R4 1146 aaKnown RBP13.6□□□□□ -0.23
VPS33B-202ENST00000535906 TMEM161AQ9NX61 479 aa13.6□□□□□ -0.23
VPS33B-202ENST00000535906 HCSTQ9UBK5 93 aa13.6□□□□□ -0.23
VPS33B-202ENST00000535906 ADAM28Q9UKQ2 775 aa13.6□□□□□ -0.23
VPS33B-202ENST00000535906 HBS1LQ9Y450 684 aaKnown RBP13.6□□□□□ -0.23
VPS33B-202ENST00000535906 PCDHB5Q9Y5E4 795 aa13.6□□□□□ -0.23
VPS33B-202ENST00000535906 PLXNA3P51805 1871 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms