RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 COL5A1P20908 1838 aaPredicted RBP11.07□□□□□ -0.64
CCDC60-202ENST00000535685 TDRD6O60522 2096 aaKnown RBP11.07□□□□□ -0.64
CCDC60-202ENST00000535685 A0A1B0GVT2 93 aa11.07□□□□□ -0.64
CCDC60-202ENST00000535685 A0A1W2PP55 124 aa11.07□□□□□ -0.64
CCDC60-202ENST00000535685 ILVBLA1L0T0 632 aa11.07□□□□□ -0.64
CCDC60-202ENST00000535685 VILLO15195 856 aa11.07□□□□□ -0.64
CCDC60-202ENST00000535685 SH3BP5O60239 455 aa11.07□□□□□ -0.64
CCDC60-202ENST00000535685 PCDHGA12O60330 932 aa11.07□□□□□ -0.64
CCDC60-202ENST00000535685 CNTN5O94779 1100 aa11.07□□□□□ -0.64
CCDC60-202ENST00000535685 GFPT2O94808 682 aa11.07□□□□□ -0.64
CCDC60-202ENST00000535685 RDXP35241 583 aaKnown RBP11.07□□□□□ -0.64
CCDC60-202ENST00000535685 DRD3P35462 400 aa11.07□□□□□ -0.64
CCDC60-202ENST00000535685 CTSKP43235 329 aa11.07□□□□□ -0.64
CCDC60-202ENST00000535685 PTPN9P43378 593 aa11.07□□□□□ -0.64
CCDC60-202ENST00000535685 CSNK1EP49674 416 aaKnown RBP11.07□□□□□ -0.64
CCDC60-202ENST00000535685 KLK7P49862 253 aa11.07□□□□□ -0.64
CCDC60-202ENST00000535685 KRT83P78385 493 aa11.07□□□□□ -0.64
CCDC60-202ENST00000535685 SIM1P81133 766 aaPredicted RBP11.07□□□□□ -0.64
CCDC60-202ENST00000535685 SLC20A2Q08357 652 aa11.07□□□□□ -0.64
CCDC60-202ENST00000535685 PTP4A2Q12974 167 aa11.07□□□□□ -0.64
CCDC60-202ENST00000535685 TRIP6Q15654 476 aaKnown RBP11.07□□□□□ -0.64
CCDC60-202ENST00000535685 DLG2Q15700 870 aa11.07□□□□□ -0.64
CCDC60-202ENST00000535685 KIF19Q2TAC6 998 aa11.07□□□□□ -0.64
CCDC60-202ENST00000535685 HLA-BQ31612 363 aa11.07□□□□□ -0.64
CCDC60-202ENST00000535685 MSS51Q4VC12 460 aa11.07□□□□□ -0.64
CCDC60-202ENST00000535685 ALFQ53S48 1182 aa11.07□□□□□ -0.64
CCDC60-202ENST00000535685 C6orf118Q5T5N4 469 aa11.07□□□□□ -0.64
CCDC60-202ENST00000535685 CCDC183Q5T5S1 534 aa11.07□□□□□ -0.64
CCDC60-202ENST00000535685 FAM46CQ5VWP2 391 aa11.07□□□□□ -0.64
CCDC60-202ENST00000535685 NCEH1Q6PIU2 408 aa11.07□□□□□ -0.64
CCDC60-202ENST00000535685 STRADAQ7RTN6 431 aa11.07□□□□□ -0.64
CCDC60-202ENST00000535685 PHF13Q86YI8 300 aaPredicted RBP11.07□□□□□ -0.64
CCDC60-202ENST00000535685 NAXDQ8IW45 347 aa11.07□□□□□ -0.64
CCDC60-202ENST00000535685 DCAF4L2Q8NA75 395 aa11.07□□□□□ -0.64
CCDC60-202ENST00000535685 BAHD1Q8TBE0 780 aaPredicted RBP11.07□□□□□ -0.64
CCDC60-202ENST00000535685 SLC20A1Q8WUM9 679 aa11.07□□□□□ -0.64
CCDC60-202ENST00000535685 CENPIQ92674 756 aaPredicted RBP11.07□□□□□ -0.64
CCDC60-202ENST00000535685 PSMB7Q99436 277 aa11.07□□□□□ -0.64
CCDC60-202ENST00000535685 SPSB2Q99619 263 aa11.07□□□□□ -0.64
CCDC60-202ENST00000535685 OMDQ99983 421 aa11.07□□□□□ -0.64
CCDC60-202ENST00000535685 C2orf49Q9BVC5 232 aaPredicted RBP11.07□□□□□ -0.64
CCDC60-202ENST00000535685 KRTAP3-3Q9BYR6 98 aa11.07□□□□□ -0.64
CCDC60-202ENST00000535685 KRTAP3-2Q9BYR7 98 aa11.07□□□□□ -0.64
CCDC60-202ENST00000535685 TM7SF3Q9NS93 570 aa11.07□□□□□ -0.64
CCDC60-202ENST00000535685 FAM207AQ9NSI2 230 aaPredicted RBP11.07□□□□□ -0.64
CCDC60-202ENST00000535685 VPS28Q9UK41 221 aa11.07□□□□□ -0.64
CCDC60-202ENST00000535685 ANKRD6Q9Y2G4 727 aa11.07□□□□□ -0.64
CCDC60-202ENST00000535685 SLCO1B1Q9Y6L6 691 aa11.07□□□□□ -0.64
CCDC60-202ENST00000535685 APC2O95996 2303 aa11.07□□□□□ -0.64
CCDC60-202ENST00000535685 SPAARA0A1B0GVQ0 90 aa11.06□□□□□ -0.64
CCDC60-202ENST00000535685 TMEM8BA6NDV4 472 aa11.06□□□□□ -0.64
CCDC60-202ENST00000535685 C2CD4BA6NLJ0 364 aa11.06□□□□□ -0.64
CCDC60-202ENST00000535685 E9PAM4 449 aa11.06□□□□□ -0.64
CCDC60-202ENST00000535685 FLRT2O43155 660 aa11.06□□□□□ -0.64
CCDC60-202ENST00000535685 RNASEH2AO75792 299 aaKnown RBP11.06□□□□□ -0.64
CCDC60-202ENST00000535685 DKK1O94907 266 aa11.06□□□□□ -0.64
CCDC60-202ENST00000535685 FSBPO95073 299 aa11.06□□□□□ -0.64
CCDC60-202ENST00000535685 PROS1P07225 676 aa11.06□□□□□ -0.64
CCDC60-202ENST00000535685 RHOCP08134 193 aa11.06□□□□□ -0.64
CCDC60-202ENST00000535685 SRCP12931 536 aa11.06□□□□□ -0.64
CCDC60-202ENST00000535685 PSMD8P48556 350 aa11.06□□□□□ -0.64
CCDC60-202ENST00000535685 ADPRHP54922 357 aa11.06□□□□□ -0.64
CCDC60-202ENST00000535685 FAM193AP78312 1265 aa11.06□□□□□ -0.64
CCDC60-202ENST00000535685 FOXC1Q12948 553 aa11.06□□□□□ -0.64
CCDC60-202ENST00000535685 SUZ12Q15022 739 aaKnown RBP11.06□□□□□ -0.64
CCDC60-202ENST00000535685 SYCP1Q15431 976 aa11.06□□□□□ -0.64
CCDC60-202ENST00000535685 MANEALQ5VSG8 457 aa11.06□□□□□ -0.64
CCDC60-202ENST00000535685 LRSAM1Q6UWE0 723 aa11.06□□□□□ -0.64
CCDC60-202ENST00000535685 RAB44Q7Z6P3 723 aaPredicted RBP11.06□□□□□ -0.64
CCDC60-202ENST00000535685 KDF1Q8NAX2 398 aaPredicted RBP11.06□□□□□ -0.64
CCDC60-202ENST00000535685 TMIEQ8NEW7 156 aa11.06□□□□□ -0.64
CCDC60-202ENST00000535685 NEK11Q8NG66 645 aa11.06□□□□□ -0.64
CCDC60-202ENST00000535685 GANCQ8TET4 914 aa11.06□□□□□ -0.64
CCDC60-202ENST00000535685 SNX19Q92543 992 aa11.06□□□□□ -0.64
CCDC60-202ENST00000535685 KCTD12Q96CX2 325 aaKnown RBP11.06□□□□□ -0.64
CCDC60-202ENST00000535685 CFAP57Q96MR6 1250 aa11.06□□□□□ -0.64
CCDC60-202ENST00000535685 BPIFA3Q9BQP9 254 aa11.06□□□□□ -0.64
CCDC60-202ENST00000535685 OSBPL2Q9H1P3 480 aa11.06□□□□□ -0.64
CCDC60-202ENST00000535685 EBF2Q9HAK2 575 aa11.06□□□□□ -0.64
CCDC60-202ENST00000535685 NLRC4Q9NPP4 1024 aa11.06□□□□□ -0.64
CCDC60-202ENST00000535685 PCOLCE2Q9UKZ9 415 aa11.06□□□□□ -0.64
CCDC60-202ENST00000535685 MYO6Q9UM54 1294 aa11.06□□□□□ -0.64
CCDC60-202ENST00000535685 FNDC3AQ9Y2H6 1198 aaKnown RBP11.06□□□□□ -0.64
CCDC60-202ENST00000535685 MSRB2Q9Y3D2 182 aa11.06□□□□□ -0.64
CCDC60-202ENST00000535685 PKD1L2Q7Z442 2459 aa11.06□□□□□ -0.64
CCDC60-202ENST00000535685 A0A1W2PR77 199 aa11.05□□□□□ -0.64
CCDC60-202ENST00000535685 TCRBV5S1A1TA0A578 114 aa11.05□□□□□ -0.64
CCDC60-202ENST00000535685 C1QTNF3-AMACRE9PGA6 284 aa11.05□□□□□ -0.64
CCDC60-202ENST00000535685 GOLGA8SH3BPF8 625 aa11.05□□□□□ -0.64
CCDC60-202ENST00000535685 PLRG1O43660 514 aaKnown RBP11.05□□□□□ -0.64
CCDC60-202ENST00000535685 ZMPSTE24O75844 475 aa11.05□□□□□ -0.64
CCDC60-202ENST00000535685 IL1BP01584 269 aa11.05□□□□□ -0.64
CCDC60-202ENST00000535685 CALB1P05937 261 aa11.05□□□□□ -0.64
CCDC60-202ENST00000535685 VAV1P15498 845 aa11.05□□□□□ -0.64
CCDC60-202ENST00000535685 ADRA1BP35368 520 aa11.05□□□□□ -0.64
CCDC60-202ENST00000535685 GGCXP38435 758 aa11.05□□□□□ -0.64
CCDC60-202ENST00000535685 UBXN1Q04323 297 aa11.05□□□□□ -0.64
CCDC60-202ENST00000535685 CCDC15Q0P6D6 951 aa11.05□□□□□ -0.64
CCDC60-202ENST00000535685 ST3GAL2Q16842 350 aa11.05□□□□□ -0.64
CCDC60-202ENST00000535685 CLEC16AQ2KHT3 1053 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms