RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 FAR1Q8WVX9 515 aa5.52□□□□□ -1.53
PRKDC-205ENST00000535375 THAP4Q8WY91 577 aa5.52□□□□□ -1.53
PRKDC-205ENST00000535375 KTI12Q96EK9 354 aaPredicted RBP5.52□□□□□ -1.53
PRKDC-205ENST00000535375 FRG2BQ96QU4 278 aa5.52□□□□□ -1.53
PRKDC-205ENST00000535375 WDR77Q9BQA1 342 aaPredicted RBP5.52□□□□□ -1.53
PRKDC-205ENST00000535375 ZPBPQ9BS86 351 aa5.52□□□□□ -1.53
PRKDC-205ENST00000535375 MYLK2Q9H1R3 596 aa5.52□□□□□ -1.53
PRKDC-205ENST00000535375 CATSPERBQ9H7T0 1116 aa5.52□□□□□ -1.53
PRKDC-205ENST00000535375 RMI1Q9H9A7 625 aa5.52□□□□□ -1.53
PRKDC-205ENST00000535375 PLK2Q9NYY3 685 aa5.52□□□□□ -1.53
PRKDC-205ENST00000535375 C17orf102A2RUQ5 167 aa5.51□□□□□ -1.53
PRKDC-205ENST00000535375 OR6C75A6NL08 312 aa5.51□□□□□ -1.53
PRKDC-205ENST00000535375 KIF1CO43896 1103 aaKnown RBP5.51□□□□□ -1.53
PRKDC-205ENST00000535375 ARRB2P32121 409 aa5.51□□□□□ -1.53
PRKDC-205ENST00000535375 GRK6P43250 576 aa5.51□□□□□ -1.53
PRKDC-205ENST00000535375 THOC5Q13769 683 aaKnown RBP5.51□□□□□ -1.53
PRKDC-205ENST00000535375 HEPHL1Q6MZM0 1159 aa5.51□□□□□ -1.53
PRKDC-205ENST00000535375 CADM3Q8N126 398 aa5.51□□□□□ -1.53
PRKDC-205ENST00000535375 ANKRD44Q8N8A2 993 aa5.51□□□□□ -1.53
PRKDC-205ENST00000535375 KDM1BQ8NB78 822 aa5.51□□□□□ -1.53
PRKDC-205ENST00000535375 RBM17Q96I25 401 aaKnown RBP5.51□□□□□ -1.53
PRKDC-205ENST00000535375 POLDIP3Q9BY77 421 aaKnown RBP5.51□□□□□ -1.53
PRKDC-205ENST00000535375 PLAC1Q9HBJ0 212 aa5.51□□□□□ -1.53
PRKDC-205ENST00000535375 RIPOR2Q9Y4F9 1068 aa5.51□□□□□ -1.53
PRKDC-205ENST00000535375 PEX14O75381 377 aa5.5□□□□□ -1.53
PRKDC-205ENST00000535375 FAM155BO75949 473 aa5.5□□□□□ -1.53
PRKDC-205ENST00000535375 METTL18O95568 372 aa5.5□□□□□ -1.53
PRKDC-205ENST00000535375 UNGP13051 313 aaPredicted RBP5.5□□□□□ -1.53
PRKDC-205ENST00000535375 VEGFAP15692 232 aaPredicted RBP5.5□□□□□ -1.53
PRKDC-205ENST00000535375 CHRNB2P17787 502 aa5.5□□□□□ -1.53
PRKDC-205ENST00000535375 AVPR1AP37288 418 aa5.5□□□□□ -1.53
PRKDC-205ENST00000535375 CLCNKBP51801 687 aa5.5□□□□□ -1.53
PRKDC-205ENST00000535375 ERV3-1Q14264 604 aa5.5□□□□□ -1.53
PRKDC-205ENST00000535375 ZNF484Q5JVG2 852 aa5.5□□□□□ -1.53
PRKDC-205ENST00000535375 FAM83BQ5T0W9 1011 aa5.5□□□□□ -1.53
PRKDC-205ENST00000535375 RUSC1-AS1Q66K80 236 aa5.5□□□□□ -1.53
PRKDC-205ENST00000535375 PALB2Q86YC2 1186 aa5.5□□□□□ -1.53
PRKDC-205ENST00000535375 TMEM57Q8N5G2 664 aa5.5□□□□□ -1.53
PRKDC-205ENST00000535375 SCAIQ8N9R8 606 aa5.5□□□□□ -1.53
PRKDC-205ENST00000535375 ENGASEQ8NFI3 743 aa5.5□□□□□ -1.53
PRKDC-205ENST00000535375 B4GALNT2Q8NHY0 566 aa5.5□□□□□ -1.53
PRKDC-205ENST00000535375 BICD2Q8TD16 824 aa5.5□□□□□ -1.53
PRKDC-205ENST00000535375 ADAMTS15Q8TE58 950 aa5.5□□□□□ -1.53
PRKDC-205ENST00000535375 NCSTNQ92542 709 aa5.5□□□□□ -1.53
PRKDC-205ENST00000535375 TRIM63Q969Q1 353 aa5.5□□□□□ -1.53
PRKDC-205ENST00000535375 TEFMQ96QE5 360 aaKnown RBP5.5□□□□□ -1.53
PRKDC-205ENST00000535375 UPB1Q9UBR1 384 aa5.5□□□□□ -1.53
PRKDC-205ENST00000535375 MYO6Q9UM54 1294 aa5.5□□□□□ -1.53
PRKDC-205ENST00000535375 PCDHA7Q9UN72 937 aa5.5□□□□□ -1.53
PRKDC-205ENST00000535375 OSGIN2Q9Y236 505 aa5.5□□□□□ -1.53
PRKDC-205ENST00000535375 DERAQ9Y315 318 aa5.5□□□□□ -1.53
PRKDC-205ENST00000535375 BECN2A8MW95 431 aa5.49□□□□□ -1.53
PRKDC-205ENST00000535375 MS4A18H0YCH9 400 aa5.49□□□□□ -1.53
PRKDC-205ENST00000535375 RNMTO43148 476 aaKnown RBP5.49□□□□□ -1.53
PRKDC-205ENST00000535375 IRAK2O43187 625 aa5.49□□□□□ -1.53
PRKDC-205ENST00000535375 SPRY3O43610 288 aa5.49□□□□□ -1.53
PRKDC-205ENST00000535375 CBX6O95503 412 aa5.49□□□□□ -1.53
PRKDC-205ENST00000535375 DDAH2O95865 285 aa5.49□□□□□ -1.53
PRKDC-205ENST00000535375 MYZAPP0CAP1 466 aa5.49□□□□□ -1.53
PRKDC-205ENST00000535375 ARSAP15289 507 aa5.49□□□□□ -1.53
PRKDC-205ENST00000535375 RFC1P35251 1148 aaPredicted RBP5.49□□□□□ -1.53
PRKDC-205ENST00000535375 SELENOVP59797 346 aa5.49□□□□□ -1.53
PRKDC-205ENST00000535375 ZP1P60852 638 aa5.49□□□□□ -1.53
PRKDC-205ENST00000535375 ACTR2P61160 394 aa5.49□□□□□ -1.53
PRKDC-205ENST00000535375 BYSLQ13895 437 aaKnown RBP5.49□□□□□ -1.53
PRKDC-205ENST00000535375 DNTTIP2Q5QJE6 756 aaKnown RBP5.49□□□□□ -1.53
PRKDC-205ENST00000535375 FNBP1LQ5T0N5 605 aa5.49□□□□□ -1.53
PRKDC-205ENST00000535375 ANO1Q5XXA6 986 aa5.49□□□□□ -1.53
PRKDC-205ENST00000535375 MOGAT3Q86VF5 341 aa5.49□□□□□ -1.53
PRKDC-205ENST00000535375 WDR5BQ86VZ2 330 aa5.49□□□□□ -1.53
PRKDC-205ENST00000535375 IQCF1Q8N6M8 205 aa5.49□□□□□ -1.53
PRKDC-205ENST00000535375 SPATA5Q8NB90 893 aa5.49□□□□□ -1.53
PRKDC-205ENST00000535375 LINS1Q8NG48 757 aa5.49□□□□□ -1.53
PRKDC-205ENST00000535375 HDAC7Q8WUI4 952 aa5.49□□□□□ -1.53
PRKDC-205ENST00000535375 PPP1R10Q96QC0 940 aaKnown RBP5.49□□□□□ -1.53
PRKDC-205ENST00000535375 ARPC5LQ9BPX5 153 aa5.49□□□□□ -1.53
PRKDC-205ENST00000535375 TWSG1Q9GZX9 223 aa5.49□□□□□ -1.53
PRKDC-205ENST00000535375 PLEKHB1Q9UF11 243 aaPredicted RBP5.49□□□□□ -1.53
PRKDC-205ENST00000535375 FZD10Q9ULW2 581 aa5.49□□□□□ -1.53
PRKDC-205ENST00000535375 RRP7AQ9Y3A4 280 aaKnown RBP5.49□□□□□ -1.53
PRKDC-205ENST00000535375 MST1RQ04912 1400 aa5.48□□□□□ -1.53
PRKDC-205ENST00000535375 LIASO43766 372 aa5.48□□□□□ -1.53
PRKDC-205ENST00000535375 TCEA3O75764 348 aa5.48□□□□□ -1.53
PRKDC-205ENST00000535375 TK1P04183 234 aa5.48□□□□□ -1.53
PRKDC-205ENST00000535375 NGFRP08138 427 aa5.48□□□□□ -1.53
PRKDC-205ENST00000535375 CSF1P09603 554 aa5.48□□□□□ -1.53
PRKDC-205ENST00000535375 HOXC6P09630 235 aa5.48□□□□□ -1.53
PRKDC-205ENST00000535375 ENO3P13929 434 aaPredicted RBP5.48□□□□□ -1.53
PRKDC-205ENST00000535375 RXRAP19793 462 aa5.48□□□□□ -1.53
PRKDC-205ENST00000535375 HOXD3P31249 432 aaPredicted RBP5.48□□□□□ -1.53
PRKDC-205ENST00000535375 CCKBRP32239 447 aa5.48□□□□□ -1.53
PRKDC-205ENST00000535375 MVDP53602 400 aa5.48□□□□□ -1.53
PRKDC-205ENST00000535375 ARHGAP8P85298 464 aa5.48□□□□□ -1.53
PRKDC-205ENST00000535375 AP5B1Q2VPB7 878 aa5.48□□□□□ -1.53
PRKDC-205ENST00000535375 SYTL3Q4VX76 610 aa5.48□□□□□ -1.53
PRKDC-205ENST00000535375 FSCBQ5H9T9 825 aa5.48□□□□□ -1.53
PRKDC-205ENST00000535375 FTSJ3Q8IY81 847 aaKnown RBP5.48□□□□□ -1.53
PRKDC-205ENST00000535375 ZDHHC23Q8IYP9 409 aa5.48□□□□□ -1.53
PRKDC-205ENST00000535375 CEP76Q8TAP6 659 aa5.48□□□□□ -1.53
PRKDC-205ENST00000535375 URB1-AS1Q96HZ7 61 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms