RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 TLR4O00206 839 aa16.57■□□□□ 0.24
CLSTN3-204ENST00000535313 WNT9AO14904 365 aa16.57■□□□□ 0.24
CLSTN3-204ENST00000535313 YKT6O15498 198 aa16.57■□□□□ 0.24
CLSTN3-204ENST00000535313 CYP1A1P04798 512 aaPredicted RBP16.57■□□□□ 0.24
CLSTN3-204ENST00000535313 MMP8P22894 467 aa16.57■□□□□ 0.24
CLSTN3-204ENST00000535313 RRM1P23921 792 aa16.57■□□□□ 0.24
CLSTN3-204ENST00000535313 MAT2AP31153 395 aaKnown RBP16.57■□□□□ 0.24
CLSTN3-204ENST00000535313 SDC4P31431 198 aa16.57■□□□□ 0.24
CLSTN3-204ENST00000535313 CHRNA3P32297 505 aa16.57■□□□□ 0.24
CLSTN3-204ENST00000535313 RECQLP46063 649 aaPredicted RBP16.57■□□□□ 0.24
CLSTN3-204ENST00000535313 ARRB1P49407 418 aaPredicted RBP16.57■□□□□ 0.24
CLSTN3-204ENST00000535313 JAM2P57087 298 aa16.57■□□□□ 0.24
CLSTN3-204ENST00000535313 FMO1Q01740 532 aa16.57■□□□□ 0.24
CLSTN3-204ENST00000535313 ARL13BQ3SXY8 428 aa16.57■□□□□ 0.24
CLSTN3-204ENST00000535313 PRAMEF14Q5SWL7 426 aa16.57■□□□□ 0.24
CLSTN3-204ENST00000535313 AGBL4Q5VU57 503 aa16.57■□□□□ 0.24
CLSTN3-204ENST00000535313 NAPEPLDQ6IQ20 393 aa16.57■□□□□ 0.24
CLSTN3-204ENST00000535313 RETSATQ6NUM9 610 aa16.57■□□□□ 0.24
CLSTN3-204ENST00000535313 BNIPLQ7Z465 357 aa16.57■□□□□ 0.24
CLSTN3-204ENST00000535313 TRIM69Q86WT6 500 aa16.57■□□□□ 0.24
CLSTN3-204ENST00000535313 EMC1Q8N766 993 aa16.57■□□□□ 0.24
CLSTN3-204ENST00000535313 SPON2Q9BUD6 331 aa16.57■□□□□ 0.24
CLSTN3-204ENST00000535313 ZYG11BQ9C0D3 744 aa16.57■□□□□ 0.24
CLSTN3-204ENST00000535313 DYRK4Q9NR20 520 aa16.57■□□□□ 0.24
CLSTN3-204ENST00000535313 DMTF1Q9Y222 760 aa16.57■□□□□ 0.24
CLSTN3-204ENST00000535313 ZZEF1O43149 2961 aa16.57■□□□□ 0.24
CLSTN3-204ENST00000535313 K7ERQ8 282 aa16.56■□□□□ 0.24
CLSTN3-204ENST00000535313 CBX4O00257 560 aa16.56■□□□□ 0.24
CLSTN3-204ENST00000535313 KPNA3O00505 521 aaPredicted RBP16.56■□□□□ 0.24
CLSTN3-204ENST00000535313 EPHB6O15197 1021 aa16.56■□□□□ 0.24
CLSTN3-204ENST00000535313 ENDOD1O94919 500 aa16.56■□□□□ 0.24
CLSTN3-204ENST00000535313 PRNPP04156 253 aa16.56■□□□□ 0.24
CLSTN3-204ENST00000535313 ITGAVP06756 1048 aa16.56■□□□□ 0.24
CLSTN3-204ENST00000535313 CHRNB2P17787 502 aa16.56■□□□□ 0.24
CLSTN3-204ENST00000535313 CDK11BP21127 795 aaKnown RBP16.56■□□□□ 0.24
CLSTN3-204ENST00000535313 COPB1P53618 953 aaKnown RBP16.56■□□□□ 0.24
CLSTN3-204ENST00000535313 MYL5Q02045 173 aa16.56■□□□□ 0.24
CLSTN3-204ENST00000535313 STX1AQ16623 288 aa16.56■□□□□ 0.24
CLSTN3-204ENST00000535313 CDO1Q16878 200 aa16.56■□□□□ 0.24
CLSTN3-204ENST00000535313 SETMARQ53H47 684 aaPredicted RBP16.56■□□□□ 0.24
CLSTN3-204ENST00000535313 LINGO4Q6UY18 593 aa16.56■□□□□ 0.24
CLSTN3-204ENST00000535313 CCNI2Q6ZMN8 369 aaPredicted RBP16.56■□□□□ 0.24
CLSTN3-204ENST00000535313 PHLDB2Q86SQ0 1253 aa16.56■□□□□ 0.24
CLSTN3-204ENST00000535313 OXR1Q8N573 874 aa16.56■□□□□ 0.24
CLSTN3-204ENST00000535313 MFSD2AQ8NA29 543 aa16.56■□□□□ 0.24
CLSTN3-204ENST00000535313 TMIEQ8NEW7 156 aa16.56■□□□□ 0.24
CLSTN3-204ENST00000535313 NEK11Q8NG66 645 aa16.56■□□□□ 0.24
CLSTN3-204ENST00000535313 OR7D4Q8NG98 312 aa16.56■□□□□ 0.24
CLSTN3-204ENST00000535313 OR2A12Q8NGT7 310 aa16.56■□□□□ 0.24
CLSTN3-204ENST00000535313 SLC30A5Q8TAD4 765 aa16.56■□□□□ 0.24
CLSTN3-204ENST00000535313 RXFP2Q8WXD0 754 aa16.56■□□□□ 0.24
CLSTN3-204ENST00000535313 C11orf70Q9BRQ4 267 aa16.56■□□□□ 0.24
CLSTN3-204ENST00000535313 PREBQ9HCU5 417 aa16.56■□□□□ 0.24
CLSTN3-204ENST00000535313 TOR4AQ9NXH8 423 aa16.56■□□□□ 0.24
CLSTN3-204ENST00000535313 PPARGC1AQ9UBK2 798 aaKnown RBP16.56■□□□□ 0.24
CLSTN3-204ENST00000535313 FTSJ1Q9UET6 329 aa16.56■□□□□ 0.24
CLSTN3-204ENST00000535313 SIK3Q9Y2K2 1263 aa16.56■□□□□ 0.24
CLSTN3-204ENST00000535313 ZFHX4Q86UP3 3567 aa16.55■□□□□ 0.24
CLSTN3-204ENST00000535313 LGALS16A8MUM7 142 aa16.55■□□□□ 0.24
CLSTN3-204ENST00000535313 SMAD6O43541 496 aaKnown RBP16.55■□□□□ 0.24
CLSTN3-204ENST00000535313 MAGEC1O60732 1142 aa16.55■□□□□ 0.24
CLSTN3-204ENST00000535313 CTSLP07711 333 aa16.55■□□□□ 0.24
CLSTN3-204ENST00000535313 GLDCP23378 1020 aa16.55■□□□□ 0.24
CLSTN3-204ENST00000535313 NSFP46459 744 aaKnown RBP16.55■□□□□ 0.24
CLSTN3-204ENST00000535313 NXPH1P58417 271 aa16.55■□□□□ 0.24
CLSTN3-204ENST00000535313 GNA12Q03113 381 aa16.55■□□□□ 0.24
CLSTN3-204ENST00000535313 SLC20A2Q08357 652 aa16.55■□□□□ 0.24
CLSTN3-204ENST00000535313 STAT4Q14765 748 aa16.55■□□□□ 0.24
CLSTN3-204ENST00000535313 SYCP1Q15431 976 aa16.55■□□□□ 0.24
CLSTN3-204ENST00000535313 CCDC157Q569K6 752 aa16.55■□□□□ 0.24
CLSTN3-204ENST00000535313 C22orf39Q6P5X5 142 aa16.55■□□□□ 0.24
CLSTN3-204ENST00000535313 IQCHQ86VS3 1027 aa16.55■□□□□ 0.24
CLSTN3-204ENST00000535313 GATAD2AQ86YP4 633 aa16.55■□□□□ 0.24
CLSTN3-204ENST00000535313 ERVMER34-1Q9H9K5 563 aa16.55■□□□□ 0.24
CLSTN3-204ENST00000535313 ATP13A1Q9HD20 1204 aa16.55■□□□□ 0.24
CLSTN3-204ENST00000535313 ARHGAP20Q9P2F6 1191 aa16.55■□□□□ 0.24
CLSTN3-204ENST00000535313 OR12D3Q9UGF7 316 aa16.55■□□□□ 0.24
CLSTN3-204ENST00000535313 LIMA1Q9UHB6 759 aaKnown RBP16.55■□□□□ 0.24
CLSTN3-204ENST00000535313 WDFY3Q8IZQ1 3526 aa16.54■□□□□ 0.24
CLSTN3-204ENST00000535313 SRRM3A6NNA2 597 aaPredicted RBP16.54■□□□□ 0.24
CLSTN3-204ENST00000535313 PRAMEF26H0Y7S4 382 aa16.54■□□□□ 0.24
CLSTN3-204ENST00000535313 RNGTTO60942 597 aaKnown RBP16.54■□□□□ 0.24
CLSTN3-204ENST00000535313 DKK1O94907 266 aa16.54■□□□□ 0.24
CLSTN3-204ENST00000535313 ADRA1BP35368 520 aa16.54■□□□□ 0.24
CLSTN3-204ENST00000535313 ETFBP38117 255 aa16.54■□□□□ 0.24
CLSTN3-204ENST00000535313 SERPINH1P50454 418 aaKnown RBP16.54■□□□□ 0.24
CLSTN3-204ENST00000535313 UBXN1Q04323 297 aa16.54■□□□□ 0.24
CLSTN3-204ENST00000535313 SCAPQ12770 1279 aa16.54■□□□□ 0.24
CLSTN3-204ENST00000535313 OVGP1Q12889 678 aa16.54■□□□□ 0.24
CLSTN3-204ENST00000535313 C15orf59Q2T9L4 293 aaPredicted RBP16.54■□□□□ 0.24
CLSTN3-204ENST00000535313 CCDC14Q49A88 953 aa16.54■□□□□ 0.24
CLSTN3-204ENST00000535313 PIP5KL1Q5T9C9 394 aa16.54■□□□□ 0.24
CLSTN3-204ENST00000535313 RWDD4Q6NW29 188 aaKnown RBP16.54■□□□□ 0.24
CLSTN3-204ENST00000535313 NEK5Q6P3R8 708 aa16.54■□□□□ 0.24
CLSTN3-204ENST00000535313 STRADAQ7RTN6 431 aa16.54■□□□□ 0.24
CLSTN3-204ENST00000535313 TMPRSS7Q7RTY8 843 aa16.54■□□□□ 0.24
CLSTN3-204ENST00000535313 DRC7Q8IY82 874 aa16.54■□□□□ 0.24
CLSTN3-204ENST00000535313 GALNT15Q8N3T1 639 aa16.54■□□□□ 0.24
CLSTN3-204ENST00000535313 CHST14Q8NCH0 376 aa16.54■□□□□ 0.24
CLSTN3-204ENST00000535313 SAP25Q8TEE9 199 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms