RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 CER1O95813 267 aa3.89□□□□□ -1.79
USP48-215ENST00000534705 RFPL3SP0C7P2 107 aa3.89□□□□□ -1.79
USP48-215ENST00000534705 PRF1P14222 555 aa3.89□□□□□ -1.79
USP48-215ENST00000534705 ST6GAL1P15907 406 aa3.89□□□□□ -1.79
USP48-215ENST00000534705 TGM2P21980 687 aa3.89□□□□□ -1.79
USP48-215ENST00000534705 CYP3A7P24462 503 aa3.89□□□□□ -1.79
USP48-215ENST00000534705 KLRK1P26718 216 aa3.89□□□□□ -1.79
USP48-215ENST00000534705 CPA2P48052 419 aa3.89□□□□□ -1.79
USP48-215ENST00000534705 TAS2R50P59544 299 aa3.89□□□□□ -1.79
USP48-215ENST00000534705 ICA1Q05084 483 aa3.89□□□□□ -1.79
USP48-215ENST00000534705 BRD3Q15059 726 aa3.89□□□□□ -1.79
USP48-215ENST00000534705 ANXA2RQ3ZCQ2 193 aa3.89□□□□□ -1.79
USP48-215ENST00000534705 ZNF793Q6ZN11 406 aa3.89□□□□□ -1.79
USP48-215ENST00000534705 SPICE1Q8N0Z3 855 aa3.89□□□□□ -1.79
USP48-215ENST00000534705 VCPIP1Q96JH7 1222 aa3.89□□□□□ -1.79
USP48-215ENST00000534705 CLMNQ96JQ2 1002 aa3.89□□□□□ -1.79
USP48-215ENST00000534705 TUBB6Q9BUF5 446 aa3.89□□□□□ -1.79
USP48-215ENST00000534705 EPS8L2Q9H6S3 715 aa3.89□□□□□ -1.79
USP48-215ENST00000534705 MLXIPQ9HAP2 919 aa3.89□□□□□ -1.79
USP48-215ENST00000534705 MOV10Q9HCE1 1003 aaKnown RBP3.89□□□□□ -1.79
USP48-215ENST00000534705 TMEM184CQ9NVA4 438 aa3.89□□□□□ -1.79
USP48-215ENST00000534705 TMEM45AQ9NWC5 275 aa3.89□□□□□ -1.79
USP48-215ENST00000534705 AGO2Q9UKV8 859 aaKnown RBP3.89□□□□□ -1.79
USP48-215ENST00000534705 MAGED2Q9UNF1 606 aaPredicted RBP3.89□□□□□ -1.79
USP48-215ENST00000534705 COL5A2P05997 1499 aaPredicted RBP3.89□□□□□ -1.79
USP48-215ENST00000534705 NHSQ6T4R5 1651 aa3.89□□□□□ -1.79
USP48-215ENST00000534705 TTC21BQ7Z4L5 1316 aa3.89□□□□□ -1.79
USP48-215ENST00000534705 KIAA0232Q92628 1395 aa3.89□□□□□ -1.79
USP48-215ENST00000534705 EDC4Q6P2E9 1401 aaKnown RBP3.88□□□□□ -1.79
USP48-215ENST00000534705 COL24A1Q17RW2 1714 aa3.88□□□□□ -1.79
USP48-215ENST00000534705 FAM90A10PA6NDY2 464 aa3.88□□□□□ -1.79
USP48-215ENST00000534705 FAM90A18PA6NE21 464 aa3.88□□□□□ -1.79
USP48-215ENST00000534705 FAM90A16PA6NEW6 464 aa3.88□□□□□ -1.79
USP48-215ENST00000534705 FAM90A9PA6NNJ1 464 aa3.88□□□□□ -1.79
USP48-215ENST00000534705 LGALS16A8MUM7 142 aa3.88□□□□□ -1.79
USP48-215ENST00000534705 FAM90A5PA8MXJ8 464 aa3.88□□□□□ -1.79
USP48-215ENST00000534705 KRT86O43790 486 aa3.88□□□□□ -1.79
USP48-215ENST00000534705 SH3BP5O60239 455 aa3.88□□□□□ -1.79
USP48-215ENST00000534705 CNTN5O94779 1100 aa3.88□□□□□ -1.79
USP48-215ENST00000534705 OAZ2O95190 189 aa3.88□□□□□ -1.79
USP48-215ENST00000534705 ITGA2BP08514 1039 aa3.88□□□□□ -1.79
USP48-215ENST00000534705 FAM90A15PP0C7V4 464 aa3.88□□□□□ -1.79
USP48-215ENST00000534705 FAM90A14PP0C7W9 464 aa3.88□□□□□ -1.79
USP48-215ENST00000534705 SCP2P22307 547 aa3.88□□□□□ -1.79
USP48-215ENST00000534705 PDIA3P30101 505 aaKnown RBP3.88□□□□□ -1.79
USP48-215ENST00000534705 SLC37A1P57057 533 aa3.88□□□□□ -1.79
USP48-215ENST00000534705 LINC00205P59089 165 aa3.88□□□□□ -1.79
USP48-215ENST00000534705 RPL15P61313 204 aaKnown RBP3.88□□□□□ -1.79
USP48-215ENST00000534705 RBM6P78332 1123 aaKnown RBP3.88□□□□□ -1.79
USP48-215ENST00000534705 FOXO1Q12778 655 aa3.88□□□□□ -1.79
USP48-215ENST00000534705 HYAL1Q12794 435 aa3.88□□□□□ -1.79
USP48-215ENST00000534705 KRT81Q14533 505 aa3.88□□□□□ -1.79
USP48-215ENST00000534705 KRT72Q14CN4 511 aa3.88□□□□□ -1.79
USP48-215ENST00000534705 TBRG1Q3YBR2 411 aa3.88□□□□□ -1.79
USP48-215ENST00000534705 ISM2Q6H9L7 571 aa3.88□□□□□ -1.79
USP48-215ENST00000534705 RHPN2Q8IUC4 686 aa3.88□□□□□ -1.79
USP48-215ENST00000534705 UNC5CLQ8IV45 518 aa3.88□□□□□ -1.79
USP48-215ENST00000534705 PAQR4Q8N4S7 273 aaPredicted RBP3.88□□□□□ -1.79
USP48-215ENST00000534705 NRACQ8N912 160 aa3.88□□□□□ -1.79
USP48-215ENST00000534705 STYXQ8WUJ0 223 aa3.88□□□□□ -1.79
USP48-215ENST00000534705 REXO5Q96IC2 774 aaKnown RBP3.88□□□□□ -1.79
USP48-215ENST00000534705 GPR78Q96P69 363 aa3.88□□□□□ -1.79
USP48-215ENST00000534705 RMDN3Q96TC7 470 aa3.88□□□□□ -1.79
USP48-215ENST00000534705 NPAS1Q99742 590 aa3.88□□□□□ -1.79
USP48-215ENST00000534705 RTKNQ9BST9 563 aa3.88□□□□□ -1.79
USP48-215ENST00000534705 CRB3Q9BUF7 120 aa3.88□□□□□ -1.79
USP48-215ENST00000534705 SFXN1Q9H9B4 322 aa3.88□□□□□ -1.79
USP48-215ENST00000534705 OBP2BQ9NPH6 170 aa3.88□□□□□ -1.79
USP48-215ENST00000534705 PLCB1Q9NQ66 1216 aa3.88□□□□□ -1.79
USP48-215ENST00000534705 HERC5Q9UII4 1024 aaKnown RBP3.88□□□□□ -1.79
USP48-215ENST00000534705 TRPC5Q9UL62 973 aaPredicted RBP3.88□□□□□ -1.79
USP48-215ENST00000534705 B3GNT3Q9Y2A9 372 aa3.88□□□□□ -1.79
USP48-215ENST00000534705 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.88□□□□□ -1.79
USP48-215ENST00000534705 SCN11AQ9UI33 1791 aa3.88□□□□□ -1.79
USP48-215ENST00000534705 KTN1Q86UP2 1357 aaKnown RBP3.88□□□□□ -1.79
USP48-215ENST00000534705 NINLQ9Y2I6 1382 aa3.88□□□□□ -1.79
USP48-215ENST00000534705 TRBV5-3A0A0A0MS03 114 aa3.87□□□□□ -1.79
USP48-215ENST00000534705 KIR2DS5A0A0G2JLQ3 304 aa3.87□□□□□ -1.79
USP48-215ENST00000534705 SLC38A8A6NNN8 435 aa3.87□□□□□ -1.79
USP48-215ENST00000534705 EFCAB8A8MWE9 144 aa3.87□□□□□ -1.79
USP48-215ENST00000534705 KIR2DS3K7RE56 304 aa3.87□□□□□ -1.79
USP48-215ENST00000534705 PRPF4O43172 522 aaKnown RBP eCLIP3.87□□□□□ -1.79
USP48-215ENST00000534705 DNPH1O43598 174 aa3.87□□□□□ -1.79
USP48-215ENST00000534705 MT3P25713 68 aa3.87□□□□□ -1.79
USP48-215ENST00000534705 AKT1P31749 480 aa3.87□□□□□ -1.79
USP48-215ENST00000534705 GRK5P34947 590 aa3.87□□□□□ -1.79
USP48-215ENST00000534705 SERPINF1P36955 418 aa3.87□□□□□ -1.79
USP48-215ENST00000534705 ME1P48163 572 aa3.87□□□□□ -1.79
USP48-215ENST00000534705 FOXL2P58012 376 aa3.87□□□□□ -1.79
USP48-215ENST00000534705 GALNT1Q10472 559 aaPredicted RBP3.87□□□□□ -1.79
USP48-215ENST00000534705 SF3A3Q12874 501 aaKnown RBP eCLIP3.87□□□□□ -1.79
USP48-215ENST00000534705 MTX1Q13505 466 aa3.87□□□□□ -1.79
USP48-215ENST00000534705 PUM3Q15397 648 aaKnown RBP3.87□□□□□ -1.79
USP48-215ENST00000534705 PFKFB4Q16877 469 aa3.87□□□□□ -1.79
USP48-215ENST00000534705 ATPAF1Q5TC12 328 aaPredicted RBP3.87□□□□□ -1.79
USP48-215ENST00000534705 LIPMQ5VYY2 423 aa3.87□□□□□ -1.79
USP48-215ENST00000534705 TANGO2Q6ICL3 276 aa3.87□□□□□ -1.79
USP48-215ENST00000534705 NFRKBQ6P4R8 1299 aa3.87□□□□□ -1.79
USP48-215ENST00000534705 DHRS13Q6UX07 377 aa3.87□□□□□ -1.79
USP48-215ENST00000534705 LRIG3Q6UXM1 1119 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms