RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 HSD3B1P14060 373 aa5.03□□□□□ -1.6
ECHDC1-223ENST00000534442 APOBEC3AP31941 199 aaPredicted RBP5.03□□□□□ -1.6
ECHDC1-223ENST00000534442 PTDSS1P48651 473 aaKnown RBP5.03□□□□□ -1.6
ECHDC1-223ENST00000534442 LILRA4P59901 499 aa5.03□□□□□ -1.6
ECHDC1-223ENST00000534442 GPC5P78333 572 aa5.03□□□□□ -1.6
ECHDC1-223ENST00000534442 CREB5Q02930 508 aa5.03□□□□□ -1.6
ECHDC1-223ENST00000534442 TLE3Q04726 772 aa5.03□□□□□ -1.6
ECHDC1-223ENST00000534442 PIGFQ07326 219 aa5.03□□□□□ -1.6
ECHDC1-223ENST00000534442 ZNF844Q08AG5 666 aa5.03□□□□□ -1.6
ECHDC1-223ENST00000534442 PPFIA1Q13136 1202 aa5.03□□□□□ -1.6
ECHDC1-223ENST00000534442 TMTC4Q5T4D3 741 aa5.03□□□□□ -1.6
ECHDC1-223ENST00000534442 ZNF618Q5T7W0 954 aa5.03□□□□□ -1.6
ECHDC1-223ENST00000534442 ARHGAP40Q5TG30 622 aa5.03□□□□□ -1.6
ECHDC1-223ENST00000534442 HIST2H2BDQ6DRA6 164 aa5.03□□□□□ -1.6
ECHDC1-223ENST00000534442 LIN54Q6MZP7 749 aa5.03□□□□□ -1.6
ECHDC1-223ENST00000534442 LVRNQ6Q4G3 990 aa5.03□□□□□ -1.6
ECHDC1-223ENST00000534442 Q6ZRM9 215 aa5.03□□□□□ -1.6
ECHDC1-223ENST00000534442 TMPRSS9Q7Z410 1059 aa5.03□□□□□ -1.6
ECHDC1-223ENST00000534442 POLNQ7Z5Q5 900 aa5.03□□□□□ -1.6
ECHDC1-223ENST00000534442 LRRC56Q8IYG6 542 aaPredicted RBP5.03□□□□□ -1.6
ECHDC1-223ENST00000534442 ANKRD35Q8N283 1001 aa5.03□□□□□ -1.6
ECHDC1-223ENST00000534442 OR56A1Q8NGH5 318 aa5.03□□□□□ -1.6
ECHDC1-223ENST00000534442 MOGAT1Q96PD6 335 aa5.03□□□□□ -1.6
ECHDC1-223ENST00000534442 PNKPQ96T60 521 aa5.03□□□□□ -1.6
ECHDC1-223ENST00000534442 MNTQ99583 582 aa5.03□□□□□ -1.6
ECHDC1-223ENST00000534442 ZSWIM1Q9BR11 485 aa5.03□□□□□ -1.6
ECHDC1-223ENST00000534442 MTG1Q9BT17 334 aaPredicted RBP5.03□□□□□ -1.6
ECHDC1-223ENST00000534442 SSBP3Q9BWW4 388 aaPredicted RBP5.03□□□□□ -1.6
ECHDC1-223ENST00000534442 TEX101Q9BY14 249 aa5.03□□□□□ -1.6
ECHDC1-223ENST00000534442 HEYLQ9NQ87 328 aaPredicted RBP5.03□□□□□ -1.6
ECHDC1-223ENST00000534442 ITM2CQ9NQX7 267 aa5.03□□□□□ -1.6
ECHDC1-223ENST00000534442 TCP11L1Q9NUJ3 509 aa5.03□□□□□ -1.6
ECHDC1-223ENST00000534442 C9orf78Q9NZ63 289 aaPredicted RBP5.03□□□□□ -1.6
ECHDC1-223ENST00000534442 MED13Q9UHV7 2174 aa5.03□□□□□ -1.6
ECHDC1-223ENST00000534442 MYH13Q9UKX3 1938 aa5.02□□□□□ -1.61
ECHDC1-223ENST00000534442 A0A1B0GTW7 788 aa5.02□□□□□ -1.61
ECHDC1-223ENST00000534442 CCDC195A0A1B0GUA6 201 aa5.02□□□□□ -1.61
ECHDC1-223ENST00000534442 WIPF3A6NGB9 483 aa5.02□□□□□ -1.61
ECHDC1-223ENST00000534442 PAX4O43316 350 aa5.02□□□□□ -1.61
ECHDC1-223ENST00000534442 RRP9O43818 475 aaKnown RBP5.02□□□□□ -1.61
ECHDC1-223ENST00000534442 FAM155BO75949 473 aa5.02□□□□□ -1.61
ECHDC1-223ENST00000534442 SUN1O94901 812 aa5.02□□□□□ -1.61
ECHDC1-223ENST00000534442 INMTO95050 263 aa5.02□□□□□ -1.61
ECHDC1-223ENST00000534442 PLATP00750 562 aa5.02□□□□□ -1.61
ECHDC1-223ENST00000534442 ITGA5P08648 1049 aa5.02□□□□□ -1.61
ECHDC1-223ENST00000534442 ATXN1LP0C7T5 689 aaKnown RBP5.02□□□□□ -1.61
ECHDC1-223ENST00000534442 TPH1P17752 444 aa5.02□□□□□ -1.61
ECHDC1-223ENST00000534442 EGR1P18146 543 aa5.02□□□□□ -1.61
ECHDC1-223ENST00000534442 FGFR4P22455 802 aa5.02□□□□□ -1.61
ECHDC1-223ENST00000534442 CXCL12P48061 93 aa5.02□□□□□ -1.61
ECHDC1-223ENST00000534442 RNASE9P60153 205 aaKnown RBP5.02□□□□□ -1.61
ECHDC1-223ENST00000534442 MC2RQ01718 297 aa5.02□□□□□ -1.61
ECHDC1-223ENST00000534442 UBE3AQ05086 875 aa5.02□□□□□ -1.61
ECHDC1-223ENST00000534442 SEMA3BQ13214 749 aa5.02□□□□□ -1.61
ECHDC1-223ENST00000534442 KCNAB1Q14722 419 aa5.02□□□□□ -1.61
ECHDC1-223ENST00000534442 MAPKAPK3Q16644 382 aa5.02□□□□□ -1.61
ECHDC1-223ENST00000534442 INSCQ1MX18 579 aa5.02□□□□□ -1.61
ECHDC1-223ENST00000534442 ALFQ53S48 1182 aa5.02□□□□□ -1.61
ECHDC1-223ENST00000534442 USP17L6PQ6QN14 398 aa5.02□□□□□ -1.61
ECHDC1-223ENST00000534442 SPOCD1Q6ZMY3 1216 aa5.02□□□□□ -1.61
ECHDC1-223ENST00000534442 ARMCX2Q7L311 632 aa5.02□□□□□ -1.61
ECHDC1-223ENST00000534442 LIMS2Q7Z4I7 341 aa5.02□□□□□ -1.61
ECHDC1-223ENST00000534442 GSPT2Q8IYD1 628 aaKnown RBP5.02□□□□□ -1.61
ECHDC1-223ENST00000534442 ZNF808Q8N4W9 903 aaPredicted RBP5.02□□□□□ -1.61
ECHDC1-223ENST00000534442 STT3BQ8TCJ2 826 aa5.02□□□□□ -1.61
ECHDC1-223ENST00000534442 ZNF689Q96CS4 500 aaPredicted RBP5.02□□□□□ -1.61
ECHDC1-223ENST00000534442 KCNC2Q96PR1 638 aa5.02□□□□□ -1.61
ECHDC1-223ENST00000534442 PCDHAC1Q9H158 963 aa5.02□□□□□ -1.61
ECHDC1-223ENST00000534442 RAD54BQ9Y620 910 aa5.02□□□□□ -1.61
ECHDC1-223ENST00000534442 CDY1Q9Y6F8 540 aa5.02□□□□□ -1.61
ECHDC1-223ENST00000534442 TLN2Q9Y4G6 2542 aa5.02□□□□□ -1.61
ECHDC1-223ENST00000534442 CUBNO60494 3623 aa5.02□□□□□ -1.61
ECHDC1-223ENST00000534442 EMSYQ7Z589 1322 aa5.01□□□□□ -1.61
ECHDC1-223ENST00000534442 VPS37CA5D8V6 355 aaPredicted RBP5.01□□□□□ -1.61
ECHDC1-223ENST00000534442 CAPN14A8MX76 684 aa5.01□□□□□ -1.61
ECHDC1-223ENST00000534442 PATE3B3GLJ2 98 aa5.01□□□□□ -1.61
ECHDC1-223ENST00000534442 hCG_1984214I3L0E3 225 aa5.01□□□□□ -1.61
ECHDC1-223ENST00000534442 IPO5O00410 1097 aaKnown RBP5.01□□□□□ -1.61
ECHDC1-223ENST00000534442 SYNCRIPO60506 623 aaKnown RBP5.01□□□□□ -1.61
ECHDC1-223ENST00000534442 RPP40O75818 363 aaKnown RBP5.01□□□□□ -1.61
ECHDC1-223ENST00000534442 SLC25A27O95847 323 aa5.01□□□□□ -1.61
ECHDC1-223ENST00000534442 ELANEP08246 267 aa5.01□□□□□ -1.61
ECHDC1-223ENST00000534442 SPATA31D3P0C874 917 aa5.01□□□□□ -1.61
ECHDC1-223ENST00000534442 HOXC13P31276 330 aa5.01□□□□□ -1.61
ECHDC1-223ENST00000534442 ATICP31939 592 aa5.01□□□□□ -1.61
ECHDC1-223ENST00000534442 SCNN1GP51170 649 aa5.01□□□□□ -1.61
ECHDC1-223ENST00000534442 DGKEP52429 567 aa5.01□□□□□ -1.61
ECHDC1-223ENST00000534442 HSD11B2P80365 405 aa5.01□□□□□ -1.61
ECHDC1-223ENST00000534442 OCA2Q04671 838 aa5.01□□□□□ -1.61
ECHDC1-223ENST00000534442 COG2Q14746 738 aa5.01□□□□□ -1.61
ECHDC1-223ENST00000534442 RALBP1Q15311 655 aa5.01□□□□□ -1.61
ECHDC1-223ENST00000534442 TAF5Q15542 800 aa5.01□□□□□ -1.61
ECHDC1-223ENST00000534442 IGFBP7Q16270 282 aa5.01□□□□□ -1.61
ECHDC1-223ENST00000534442 LETM2Q2VYF4 491 aa5.01□□□□□ -1.61
ECHDC1-223ENST00000534442 ZNF750Q32MQ0 723 aa5.01□□□□□ -1.61
ECHDC1-223ENST00000534442 PDCD4Q53EL6 469 aaKnown RBP5.01□□□□□ -1.61
ECHDC1-223ENST00000534442 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.01□□□□□ -1.61
ECHDC1-223ENST00000534442 XP32Q5T750 250 aa5.01□□□□□ -1.61
ECHDC1-223ENST00000534442 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.01□□□□□ -1.61
ECHDC1-223ENST00000534442 LRRC55Q6ZSA7 311 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms