RNA–Protein interactions for RNA: ENST00000534406.1

SIPA1-210, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 3

Gene SIPA1, Length 351 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-210ENST00000534406 WDR5BQ86VZ2 330 aa24.7■■□□□ 1.54
SIPA1-210ENST00000534406 LONP2Q86WA8 852 aa24.7■■□□□ 1.54
SIPA1-210ENST00000534406 PCDH19Q8TAB3 1148 aa24.7■■□□□ 1.54
SIPA1-210ENST00000534406 KRT35Q92764 455 aa24.7■■□□□ 1.54
SIPA1-210ENST00000534406 SLC39A8Q9C0K1 460 aa24.7■■□□□ 1.54
SIPA1-210ENST00000534406 MTG2Q9H4K7 406 aa24.7■■□□□ 1.54
SIPA1-210ENST00000534406 LZTFL1Q9NQ48 299 aa24.7■■□□□ 1.54
SIPA1-210ENST00000534406 PRSS16Q9NQE7 514 aa24.7■■□□□ 1.54
SIPA1-210ENST00000534406 DFFAO00273 331 aa24.69■■□□□ 1.54
SIPA1-210ENST00000534406 AXIN1O15169 862 aa24.69■■□□□ 1.54
SIPA1-210ENST00000534406 GABRG2P18507 467 aa24.69■■□□□ 1.54
SIPA1-210ENST00000534406 NDUFV2P19404 249 aa24.69■■□□□ 1.54
SIPA1-210ENST00000534406 CTNNA2P26232 953 aa24.69■■□□□ 1.54
SIPA1-210ENST00000534406 DLG2Q15700 870 aa24.69■■□□□ 1.54
SIPA1-210ENST00000534406 NCBP2-AS2Q69YL0 99 aa24.69■■□□□ 1.54
SIPA1-210ENST00000534406 C22orf39Q6P5X5 142 aa24.69■■□□□ 1.54
SIPA1-210ENST00000534406 PEX26Q7Z412 305 aa24.69■■□□□ 1.54
SIPA1-210ENST00000534406 PGBD3Q8N328 593 aa24.69■■□□□ 1.54
SIPA1-210ENST00000534406 OR2T3Q8NH03 318 aa24.69■■□□□ 1.54
SIPA1-210ENST00000534406 FRS2Q8WU20 508 aa24.69■■□□□ 1.54
SIPA1-210ENST00000534406 RNF25Q96BH1 459 aaPredicted RBP24.69■■□□□ 1.54
SIPA1-210ENST00000534406 ZNF830Q96NB3 372 aaPredicted RBP24.69■■□□□ 1.54
SIPA1-210ENST00000534406 AMFRQ9UKV5 643 aa24.69■■□□□ 1.54
SIPA1-210ENST00000534406 TARSL2A2RTX5 802 aaKnown RBP24.68■■□□□ 1.54
SIPA1-210ENST00000534406 CCDC66A2RUB6 948 aa24.68■■□□□ 1.54
SIPA1-210ENST00000534406 K7ERQ8 282 aa24.68■■□□□ 1.54
SIPA1-210ENST00000534406 MFSD11O43934 449 aa24.68■■□□□ 1.54
SIPA1-210ENST00000534406 SIN3BO75182 1162 aa24.68■■□□□ 1.54
SIPA1-210ENST00000534406 PAPOLAP51003 745 aaKnown RBP24.68■■□□□ 1.54
SIPA1-210ENST00000534406 C9orf64Q5T6V5 341 aa24.68■■□□□ 1.54
SIPA1-210ENST00000534406 ZC3H14Q6PJT7 736 aaKnown RBP24.68■■□□□ 1.54
SIPA1-210ENST00000534406 Q6ZVU0 165 aa24.68■■□□□ 1.54
SIPA1-210ENST00000534406 NT5DC3Q86UY8 548 aa24.68■■□□□ 1.54
SIPA1-210ENST00000534406 NETO2Q8NC67 525 aa24.68■■□□□ 1.54
SIPA1-210ENST00000534406 TRAF3IP1Q8TDR0 691 aaPredicted RBP24.68■■□□□ 1.54
SIPA1-210ENST00000534406 RBM41Q96IZ5 413 aaKnown RBP24.68■■□□□ 1.54
SIPA1-210ENST00000534406 RNF157Q96PX1 679 aa24.68■■□□□ 1.54
SIPA1-210ENST00000534406 PCDHGA2Q9Y5H1 932 aa24.68■■□□□ 1.54
SIPA1-210ENST00000534406 EML5Q05BV3 1969 aa24.67■■□□□ 1.54
SIPA1-210ENST00000534406 FTCDO95954 541 aa24.67■■□□□ 1.54
SIPA1-210ENST00000534406 VAV1P15498 845 aa24.67■■□□□ 1.54
SIPA1-210ENST00000534406 COPAP53621 1224 aa24.67■■□□□ 1.54
SIPA1-210ENST00000534406 PAFAH1B3Q15102 231 aaKnown RBP24.67■■□□□ 1.54
SIPA1-210ENST00000534406 MFSD7Q6UXD7 560 aa24.67■■□□□ 1.54
SIPA1-210ENST00000534406 KIAA1324Q6UXG2 1013 aaKnown RBP24.67■■□□□ 1.54
SIPA1-210ENST00000534406 METTL3Q86U44 580 aaKnown RBP24.67■■□□□ 1.54
SIPA1-210ENST00000534406 PQLC3Q8N755 202 aa24.67■■□□□ 1.54
SIPA1-210ENST00000534406 PTPRN2Q92932 1015 aa24.67■■□□□ 1.54
SIPA1-210ENST00000534406 MRGPRX1Q96LB2 322 aa24.67■■□□□ 1.54
SIPA1-210ENST00000534406 CCDC114Q96M63 670 aa24.67■■□□□ 1.54
SIPA1-210ENST00000534406 ALS2CR12Q96Q35 445 aa24.67■■□□□ 1.54
SIPA1-210ENST00000534406 MAK16Q9BXY0 300 aaKnown RBP24.67■■□□□ 1.54
SIPA1-210ENST00000534406 TPSD1Q9BZJ3 242 aa24.67■■□□□ 1.54
SIPA1-210ENST00000534406 CEP44Q9C0F1 390 aa24.67■■□□□ 1.54
SIPA1-210ENST00000534406 MKRN2Q9H000 416 aaKnown RBP24.67■■□□□ 1.54
SIPA1-210ENST00000534406 PRDM16Q9HAZ2 1276 aa24.67■■□□□ 1.54
SIPA1-210ENST00000534406 SP110Q9HB58 689 aa24.67■■□□□ 1.54
SIPA1-210ENST00000534406 PCDHA3Q9Y5H8 950 aa24.67■■□□□ 1.54
SIPA1-210ENST00000534406 SMAD6O43541 496 aaKnown RBP24.66■■□□□ 1.54
SIPA1-210ENST00000534406 PRAMEF11O60813 436 aa24.66■■□□□ 1.54
SIPA1-210ENST00000534406 ZRANB2O95218 330 aaKnown RBP eCLIP24.66■■□□□ 1.54
SIPA1-210ENST00000534406 ELAVL3Q14576 367 aaKnown RBP24.66■■□□□ 1.54
SIPA1-210ENST00000534406 LEKR1Q6ZMV7 388 aa24.66■■□□□ 1.54
SIPA1-210ENST00000534406 SPOCD1Q6ZMY3 1216 aa24.66■■□□□ 1.54
SIPA1-210ENST00000534406 CACUL1Q86Y37 369 aa24.66■■□□□ 1.54
SIPA1-210ENST00000534406 RFX6Q8HWS3 928 aa24.66■■□□□ 1.54
SIPA1-210ENST00000534406 TMPRSS6Q8IU80 811 aa24.66■■□□□ 1.54
SIPA1-210ENST00000534406 CCDC50Q8IVM0 306 aa24.66■■□□□ 1.54
SIPA1-210ENST00000534406 TP53INP2Q8IXH6 220 aa24.66■■□□□ 1.54
SIPA1-210ENST00000534406 RCOR2Q8IZ40 523 aa24.66■■□□□ 1.54
SIPA1-210ENST00000534406 ATPAF2Q8N5M1 289 aa24.66■■□□□ 1.54
SIPA1-210ENST00000534406 PCDH20Q8N6Y1 951 aaKnown RBP24.66■■□□□ 1.54
SIPA1-210ENST00000534406 ZBTB44Q8NCP5 570 aa24.66■■□□□ 1.54
SIPA1-210ENST00000534406 EXD1Q8NHP7 514 aa24.66■■□□□ 1.54
SIPA1-210ENST00000534406 CASKIN2Q8WXE0 1202 aa24.66■■□□□ 1.54
SIPA1-210ENST00000534406 ATOH1Q92858 354 aaPredicted RBP24.66■■□□□ 1.54
SIPA1-210ENST00000534406 SLC6A17Q9H1V8 727 aa24.66■■□□□ 1.54
SIPA1-210ENST00000534406 UBA2Q9UBT2 640 aaPredicted RBP24.66■■□□□ 1.54
SIPA1-210ENST00000534406 FCF1Q9Y324 198 aaKnown RBP24.66■■□□□ 1.54
SIPA1-210ENST00000534406 ACTL7AQ9Y615 435 aa24.66■■□□□ 1.54
SIPA1-210ENST00000534406 MIF4GDA9UHW6 222 aaKnown RBP24.65■■□□□ 1.54
SIPA1-210ENST00000534406 TMCC1O94876 653 aa24.65■■□□□ 1.54
SIPA1-210ENST00000534406 CD160O95971 181 aa24.65■■□□□ 1.54
SIPA1-210ENST00000534406 CDKN2BP42772 138 aa24.65■■□□□ 1.54
SIPA1-210ENST00000534406 TAZQ16635 292 aa24.65■■□□□ 1.54
SIPA1-210ENST00000534406 ZNF776Q68DI1 518 aaPredicted RBP24.65■■□□□ 1.54
SIPA1-210ENST00000534406 STK40Q8N2I9 435 aa24.65■■□□□ 1.54
SIPA1-210ENST00000534406 UBL4BQ8N7F7 174 aa24.65■■□□□ 1.54
SIPA1-210ENST00000534406 PRCCQ92733 491 aaPredicted RBP24.65■■□□□ 1.54
SIPA1-210ENST00000534406 RSPH9Q9H1X1 276 aaPredicted RBP24.65■■□□□ 1.54
SIPA1-210ENST00000534406 PDFQ9HBH1 243 aa24.65■■□□□ 1.54
SIPA1-210ENST00000534406 IPO11Q9UI26 975 aaKnown RBP24.65■■□□□ 1.54
SIPA1-210ENST00000534406 PLXND1Q9Y4D7 1925 aa24.65■■□□□ 1.54
SIPA1-210ENST00000534406 SHROOM3Q8TF72 1996 aa24.64■■□□□ 1.54
SIPA1-210ENST00000534406 J3KR12 359 aa24.64■■□□□ 1.54
SIPA1-210ENST00000534406 APOL1O14791 398 aa24.64■■□□□ 1.54
SIPA1-210ENST00000534406 BNIP3LO60238 219 aa24.64■■□□□ 1.54
SIPA1-210ENST00000534406 RNASEH1O60930 286 aaKnown RBP24.64■■□□□ 1.54
SIPA1-210ENST00000534406 ZFXP17010 805 aaPredicted RBP24.64■■□□□ 1.54
SIPA1-210ENST00000534406 RECQLP46063 649 aaPredicted RBP24.64■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms