RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 MT-CO1P00395 513 aa17.48■□□□□ 0.39
PHRF1-206ENST00000534320 PIGRP01833 764 aa17.48■□□□□ 0.39
PHRF1-206ENST00000534320 AMHP03971 560 aa17.48■□□□□ 0.39
PHRF1-206ENST00000534320 ZNF284Q2VY69 593 aa17.48■□□□□ 0.39
PHRF1-206ENST00000534320 SLC10A6Q3KNW5 377 aa17.48■□□□□ 0.39
PHRF1-206ENST00000534320 PMF1Q6P1K2 205 aa17.48■□□□□ 0.39
PHRF1-206ENST00000534320 YTHDF3Q7Z739 585 aaKnown RBP17.48■□□□□ 0.39
PHRF1-206ENST00000534320 TRABD2AQ86V40 505 aa17.48■□□□□ 0.39
PHRF1-206ENST00000534320 ZNF516Q92618 1163 aa17.48■□□□□ 0.39
PHRF1-206ENST00000534320 ZYG11BQ9C0D3 744 aa17.48■□□□□ 0.39
PHRF1-206ENST00000534320 LRRC4CQ9HCJ2 640 aa17.48■□□□□ 0.39
PHRF1-206ENST00000534320 AHDC1Q5TGY3 1603 aaPredicted RBP17.48■□□□□ 0.39
PHRF1-206ENST00000534320 TRMT5Q32P41 509 aaKnown RBP17.47■□□□□ 0.39
PHRF1-206ENST00000534320 AGKQ53H12 422 aa17.47■□□□□ 0.39
PHRF1-206ENST00000534320 LRRC49Q8IUZ0 686 aa17.47■□□□□ 0.39
PHRF1-206ENST00000534320 TNIP2Q8NFZ5 429 aa17.47■□□□□ 0.39
PHRF1-206ENST00000534320 ZFP42Q96MM3 310 aa17.47■□□□□ 0.39
PHRF1-206ENST00000534320 V9GYQ6 96 aa17.47■□□□□ 0.39
PHRF1-206ENST00000534320 SPTLC1O15269 473 aa17.47■□□□□ 0.39
PHRF1-206ENST00000534320 CKBP12277 381 aa17.47■□□□□ 0.39
PHRF1-206ENST00000534320 IKBKEQ14164 716 aa17.47■□□□□ 0.39
PHRF1-206ENST00000534320 FUT11Q495W5 492 aa17.47■□□□□ 0.39
PHRF1-206ENST00000534320 P2RY11Q96G91 374 aa17.47■□□□□ 0.39
PHRF1-206ENST00000534320 CSPG4P5Q96PW8 444 aa17.47■□□□□ 0.39
PHRF1-206ENST00000534320 CIPCQ9C0C6 399 aa17.47■□□□□ 0.39
PHRF1-206ENST00000534320 NR2E1Q9Y466 385 aa17.47■□□□□ 0.39
PHRF1-206ENST00000534320 RAD54BQ9Y620 910 aa17.47■□□□□ 0.39
PHRF1-206ENST00000534320 FSBPO95073 299 aa17.47■□□□□ 0.39
PHRF1-206ENST00000534320 FKBP9O95302 570 aa17.47■□□□□ 0.39
PHRF1-206ENST00000534320 ALBP02768 609 aa17.47■□□□□ 0.39
PHRF1-206ENST00000534320 ATP5BP06576 529 aaKnown RBP17.47■□□□□ 0.39
PHRF1-206ENST00000534320 MZF1P28698 734 aaPredicted RBP17.47■□□□□ 0.39
PHRF1-206ENST00000534320 CD86P42081 329 aa17.47■□□□□ 0.39
PHRF1-206ENST00000534320 PLOD1Q02809 727 aaPredicted RBP17.47■□□□□ 0.39
PHRF1-206ENST00000534320 SLC20A2Q08357 652 aa17.47■□□□□ 0.39
PHRF1-206ENST00000534320 PTK2BQ14289 1009 aa17.47■□□□□ 0.39
PHRF1-206ENST00000534320 FKBP9P1Q75LS8 142 aa17.47■□□□□ 0.39
PHRF1-206ENST00000534320 C16orf59Q7L2K0 433 aa17.47■□□□□ 0.39
PHRF1-206ENST00000534320 KYQ8NBH2 561 aa17.47■□□□□ 0.39
PHRF1-206ENST00000534320 SNX27Q96L92 541 aa17.47■□□□□ 0.39
PHRF1-206ENST00000534320 THUMPD3Q9BV44 507 aaKnown RBP17.47■□□□□ 0.39
PHRF1-206ENST00000534320 GGA2Q9UJY4 613 aa17.47■□□□□ 0.39
PHRF1-206ENST00000534320 ADAM28Q9UKQ2 775 aa17.47■□□□□ 0.39
PHRF1-206ENST00000534320 STXBP5LQ9Y2K9 1186 aa17.47■□□□□ 0.39
PHRF1-206ENST00000534320 NR5A2O00482 541 aa17.47■□□□□ 0.39
PHRF1-206ENST00000534320 ASNA1O43681 348 aa17.47■□□□□ 0.39
PHRF1-206ENST00000534320 CDH24Q86UP0 819 aa17.47■□□□□ 0.39
PHRF1-206ENST00000534320 P3H2Q8IVL5 708 aa17.47■□□□□ 0.39
PHRF1-206ENST00000534320 NETO2Q8NC67 525 aa17.47■□□□□ 0.39
PHRF1-206ENST00000534320 A0A087X1B8 175 aa17.46■□□□□ 0.39
PHRF1-206ENST00000534320 C5orf58C9J3I9 102 aa17.46■□□□□ 0.39
PHRF1-206ENST00000534320 HOXB8P17481 243 aaPredicted RBP17.46■□□□□ 0.39
PHRF1-206ENST00000534320 HOXD13P35453 343 aa17.46■□□□□ 0.39
PHRF1-206ENST00000534320 DDX39BQ13838 428 aaKnown RBP17.46■□□□□ 0.39
PHRF1-206ENST00000534320 WASHC2DQ5SRD0 308 aa17.46■□□□□ 0.39
PHRF1-206ENST00000534320 PKN3Q6P5Z2 889 aa17.46■□□□□ 0.39
PHRF1-206ENST00000534320 ZNF786Q8N393 782 aa17.46■□□□□ 0.39
PHRF1-206ENST00000534320 FBXO39Q8N4B4 442 aa17.46■□□□□ 0.39
PHRF1-206ENST00000534320 RMI1Q9H9A7 625 aa17.46■□□□□ 0.39
PHRF1-206ENST00000534320 ATAD3AQ9NVI7 634 aa17.46■□□□□ 0.39
PHRF1-206ENST00000534320 ADGRA3Q8IWK6 1321 aa17.46■□□□□ 0.39
PHRF1-206ENST00000534320 ADRA1BP35368 520 aa17.46■□□□□ 0.39
PHRF1-206ENST00000534320 NOGQ13253 232 aa17.46■□□□□ 0.39
PHRF1-206ENST00000534320 NDUFA5Q16718 116 aa17.46■□□□□ 0.39
PHRF1-206ENST00000534320 HIST2H2ACQ16777 129 aaPredicted RBP17.46■□□□□ 0.39
PHRF1-206ENST00000534320 SDHAF4Q5VUM1 108 aa17.46■□□□□ 0.39
PHRF1-206ENST00000534320 HIST2H2AA3Q6FI13 130 aa17.46■□□□□ 0.39
PHRF1-206ENST00000534320 SENP6Q9GZR1 1112 aaPredicted RBP17.46■□□□□ 0.39
PHRF1-206ENST00000534320 DNMT3LQ9UJW3 386 aa17.46■□□□□ 0.39
PHRF1-206ENST00000534320 PSMC3P17980 439 aa17.46■□□□□ 0.39
PHRF1-206ENST00000534320 PSMA4P25789 261 aaKnown RBP17.46■□□□□ 0.39
PHRF1-206ENST00000534320 KLRC2P26717 231 aa17.46■□□□□ 0.39
PHRF1-206ENST00000534320 CACNA2D1P54289 1103 aa17.46■□□□□ 0.39
PHRF1-206ENST00000534320 ARMCX4Q5H9R4 360 aa17.46■□□□□ 0.39
PHRF1-206ENST00000534320 UCMAQ8WVF2 138 aa17.46■□□□□ 0.39
PHRF1-206ENST00000534320 FBXL18Q96ME1 805 aa17.46■□□□□ 0.39
PHRF1-206ENST00000534320 EPS8L2Q9H6S3 715 aa17.46■□□□□ 0.39
PHRF1-206ENST00000534320 TPST1O60507 370 aa17.46■□□□□ 0.38
PHRF1-206ENST00000534320 PLIN5Q00G26 463 aa17.46■□□□□ 0.38
PHRF1-206ENST00000534320 HECTD3Q5T447 861 aa17.46■□□□□ 0.38
PHRF1-206ENST00000534320 ANKS3Q6ZW76 656 aa17.46■□□□□ 0.38
PHRF1-206ENST00000534320 SLC26A9Q7LBE3 791 aa17.46■□□□□ 0.38
PHRF1-206ENST00000534320 ZNF572Q7Z3I7 529 aaPredicted RBP17.46■□□□□ 0.38
PHRF1-206ENST00000534320 PLD5Q8N7P1 536 aa17.46■□□□□ 0.38
PHRF1-206ENST00000534320 C19orf60Q96EN9 201 aa17.46■□□□□ 0.38
PHRF1-206ENST00000534320 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.46■□□□□ 0.382e-6■■□□□ 13.6
PHRF1-206ENST00000534320 CRYL1Q9Y2S2 319 aa17.46■□□□□ 0.38
PHRF1-206ENST00000534320 DUSP11O75319 330 aaKnown RBP17.45■□□□□ 0.38
PHRF1-206ENST00000534320 FKBP6O75344 327 aa17.45■□□□□ 0.38
PHRF1-206ENST00000534320 ZNF7P17097 686 aaPredicted RBP17.45■□□□□ 0.38
PHRF1-206ENST00000534320 CYP3A5P20815 502 aa17.45■□□□□ 0.38
PHRF1-206ENST00000534320 PTGIRP43119 386 aa17.45■□□□□ 0.38
PHRF1-206ENST00000534320 ASPAP45381 313 aa17.45■□□□□ 0.38
PHRF1-206ENST00000534320 NFYCQ13952 458 aa17.45■□□□□ 0.38
PHRF1-206ENST00000534320 DDR2Q16832 855 aa17.45■□□□□ 0.38
PHRF1-206ENST00000534320 OLFML1Q6UWY5 402 aa17.45■□□□□ 0.38
PHRF1-206ENST00000534320 ACMSDQ8TDX5 336 aa17.45■□□□□ 0.38
PHRF1-206ENST00000534320 JADE3Q92613 823 aa17.45■□□□□ 0.38
PHRF1-206ENST00000534320 FAXDC2Q96IV6 333 aa17.45■□□□□ 0.38
PHRF1-206ENST00000534320 PKD1L3Q7Z443 1732 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms