RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 TMEM121Q9BTD3 319 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 FSD1LQ9BXM9 530 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 TDRD1Q9BXT4 1180 aaKnown RBP4.11□□□□□ -1.75
SOX6-217ENST00000533870 ZNF341Q9BYN7 854 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 EPB41L4BQ9H329 900 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 VRTNQ9H8Y1 702 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 PCDHGA4Q9Y5G9 962 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 PDZK1P1A8MUH7 402 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 RNF103O00237 685 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 SLC7A4O43246 635 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 FARP2O94887 1054 aaPredicted RBP4.11□□□□□ -1.75
SOX6-217ENST00000533870 GRIA2P42262 883 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 SF3A3Q12874 501 aaKnown RBP eCLIP4.11□□□□□ -1.75
SOX6-217ENST00000533870 SMU1Q2TAY7 513 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 MZT2BQ6NZ67 158 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 UNC5AQ6ZN44 842 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 LRRC8DQ7L1W4 858 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 KBTBD6Q86V97 674 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 CPSF7Q8N684 471 aaKnown RBP4.11□□□□□ -1.75
SOX6-217ENST00000533870 ANKFN1Q8N957 763 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 SETD6Q8TBK2 473 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 STAG3L4Q8TBR4 150 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 CPA5Q8WXQ8 436 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 TADA1Q96BN2 335 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 FEM1CQ96JP0 617 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 KREMEN1Q96MU8 473 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 NOL11Q9H8H0 719 aaKnown RBP4.11□□□□□ -1.75
SOX6-217ENST00000533870 PREBQ9HCU5 417 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 XPNPEP3Q9NQH7 507 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 IARS2Q9NSE4 1012 aaKnown RBP4.11□□□□□ -1.75
SOX6-217ENST00000533870 ERAP1Q9NZ08 941 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 RPS6KA6Q9UK32 745 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 NR2E1Q9Y466 385 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 SPEF2Q9C093 1822 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 FAM86B1E9PN63 330 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 CLPXO76031 633 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 IPO13O94829 963 aaKnown RBP4.11□□□□□ -1.75
SOX6-217ENST00000533870 PGM3O95394 542 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 PTTG1O95997 202 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 C2P06681 752 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 HMBSP08397 361 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 FAM86B2P0C5J1 330 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 TAF6P49848 677 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 MPP2Q14168 576 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 CYP4A22Q5TCH4 519 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 EGFLAMQ63HQ2 1017 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 CDC42EP5Q6NZY7 148 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 ZNF773Q6PK81 442 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 CHERPQ8IWX8 916 aaKnown RBP4.11□□□□□ -1.75
SOX6-217ENST00000533870 DCAKDQ8WVC6 231 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 GAB3Q8WWW8 586 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 PROX1Q92786 737 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 TMA16Q96EY4 203 aaKnown RBP4.11□□□□□ -1.75
SOX6-217ENST00000533870 DEPDC7Q96QD5 511 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 PORCNQ9H237 461 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 POPDC3Q9HBV1 291 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 TM9SF3Q9HD45 589 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 PKD2L1Q9P0L9 805 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 MBD2Q9UBB5 411 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 CHORDC1Q9UHD1 332 aaPredicted RBP4.11□□□□□ -1.75
SOX6-217ENST00000533870 FBXO5Q9UKT4 447 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 ZNF451Q9Y4E5 1061 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.11□□□□□ -1.75
SOX6-217ENST00000533870 WASF2Q9Y6W5 498 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 C3P01024 1663 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 DCDC2CA8MYV0 355 aa4.1□□□□□ -1.75
SOX6-217ENST00000533870 DDX39AO00148 427 aaKnown RBP4.1□□□□□ -1.75
SOX6-217ENST00000533870 SNNO75324 88 aaPredicted RBP4.1□□□□□ -1.75
SOX6-217ENST00000533870 LRCH4O75427 683 aa4.1□□□□□ -1.75
SOX6-217ENST00000533870 SRPRAP08240 638 aaKnown RBP4.1□□□□□ -1.75
SOX6-217ENST00000533870 MSL3P1P0C860 447 aa4.1□□□□□ -1.75
SOX6-217ENST00000533870 HSD17B1P14061 328 aa4.1□□□□□ -1.75
SOX6-217ENST00000533870 ITGA2P17301 1181 aa4.1□□□□□ -1.75
SOX6-217ENST00000533870 AMPD1P23109 780 aa4.1□□□□□ -1.75
SOX6-217ENST00000533870 ALDH9A1P49189 494 aa4.1□□□□□ -1.75
SOX6-217ENST00000533870 EIF2B2P49770 351 aaKnown RBP4.1□□□□□ -1.75
SOX6-217ENST00000533870 RENBPP51606 427 aa4.1□□□□□ -1.75
SOX6-217ENST00000533870 NDST1P52848 882 aa4.1□□□□□ -1.75
SOX6-217ENST00000533870 MRPS22P82650 360 aaKnown RBP4.1□□□□□ -1.75
SOX6-217ENST00000533870 RAD51Q06609 339 aa4.1□□□□□ -1.75
SOX6-217ENST00000533870 TRAF3Q13114 568 aa4.1□□□□□ -1.75
SOX6-217ENST00000533870 BMPR2Q13873 1038 aa4.1□□□□□ -1.75
SOX6-217ENST00000533870 TTC7BQ86TV6 843 aa4.1□□□□□ -1.75
SOX6-217ENST00000533870 ITIH5Q86UX2 942 aa4.1□□□□□ -1.75
SOX6-217ENST00000533870 SLC47A2Q86VL8 602 aa4.1□□□□□ -1.75
SOX6-217ENST00000533870 LMO3Q8TAP4 145 aa4.1□□□□□ -1.75
SOX6-217ENST00000533870 RXFP2Q8WXD0 754 aa4.1□□□□□ -1.75
SOX6-217ENST00000533870 PGBD4Q96DM1 585 aa4.1□□□□□ -1.75
SOX6-217ENST00000533870 PLEKHA8Q96JA3 519 aa4.1□□□□□ -1.75
SOX6-217ENST00000533870 Q96MT0 163 aa4.1□□□□□ -1.75
SOX6-217ENST00000533870 TRAF4Q9BUZ4 470 aaPredicted RBP4.1□□□□□ -1.75
SOX6-217ENST00000533870 ADNPQ9H2P0 1102 aa4.1□□□□□ -1.75
SOX6-217ENST00000533870 OLA1Q9NTK5 396 aaKnown RBP4.1□□□□□ -1.75
SOX6-217ENST00000533870 SPATA7Q9P0W8 599 aa4.1□□□□□ -1.75
SOX6-217ENST00000533870 DNAJB9Q9UBS3 223 aa4.1□□□□□ -1.75
SOX6-217ENST00000533870 PCDHA11Q9Y5I1 949 aa4.1□□□□□ -1.75
SOX6-217ENST00000533870 SESN1Q9Y6P5 492 aa4.1□□□□□ -1.75
SOX6-217ENST00000533870 ARHGEF28Q8N1W1 1705 aaKnown RBP4.1□□□□□ -1.75
SOX6-217ENST00000533870 KPNA3O00505 521 aaPredicted RBP4.1□□□□□ -1.75
SOX6-217ENST00000533870 RNASEH1O60930 286 aaKnown RBP4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms