RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 ZNF783Q6ZMS7 281 aa15.81■□□□□ 0.12
CPSF1-211ENST00000533492 GLRX5Q86SX6 157 aa15.81■□□□□ 0.12
CPSF1-211ENST00000533492 AOPEPQ8N6M6 819 aa15.81■□□□□ 0.12
CPSF1-211ENST00000533492 PNPLA1Q8N8W4 532 aa15.81■□□□□ 0.12
CPSF1-211ENST00000533492 OR7D4Q8NG98 312 aa15.81■□□□□ 0.12
CPSF1-211ENST00000533492 JOSD2Q8TAC2 188 aa15.81■□□□□ 0.12
CPSF1-211ENST00000533492 ERGIC2Q96RQ1 377 aa15.81■□□□□ 0.12
CPSF1-211ENST00000533492 PCDHB18PQ96TA0 734 aa15.81■□□□□ 0.12
CPSF1-211ENST00000533492 ATP13A1Q9HD20 1204 aa15.81■□□□□ 0.12
CPSF1-211ENST00000533492 DYRK4Q9NR20 520 aa15.81■□□□□ 0.12
CPSF1-211ENST00000533492 NYNRINQ9P2P1 1898 aaKnown RBP15.81■□□□□ 0.12
CPSF1-211ENST00000533492 OR12D3Q9UGF7 316 aa15.81■□□□□ 0.12
CPSF1-211ENST00000533492 KLK13Q9UKR3 277 aa15.81■□□□□ 0.12
CPSF1-211ENST00000533492 MSRB2Q9Y3D2 182 aa15.81■□□□□ 0.12
CPSF1-211ENST00000533492 TMEM131Q92545 1883 aa15.8■□□□□ 0.12
CPSF1-211ENST00000533492 C2CD4BA6NLJ0 364 aa15.8■□□□□ 0.12
CPSF1-211ENST00000533492 KPNA3O00505 521 aaPredicted RBP15.8■□□□□ 0.12
CPSF1-211ENST00000533492 SMAD6O43541 496 aaKnown RBP15.8■□□□□ 0.12
CPSF1-211ENST00000533492 PLRG1O43660 514 aaKnown RBP15.8■□□□□ 0.12
CPSF1-211ENST00000533492 GJB6O95452 261 aa15.8■□□□□ 0.12
CPSF1-211ENST00000533492 CALB1P05937 261 aa15.8■□□□□ 0.12
CPSF1-211ENST00000533492 CCDC172P0C7W6 258 aa15.8■□□□□ 0.12
CPSF1-211ENST00000533492 MAT2AP31153 395 aaKnown RBP15.8■□□□□ 0.12
CPSF1-211ENST00000533492 GRK6P43250 576 aa15.8■□□□□ 0.12
CPSF1-211ENST00000533492 PTPN9P43378 593 aa15.8■□□□□ 0.12
CPSF1-211ENST00000533492 PPP2CBP62714 309 aa15.8■□□□□ 0.12
CPSF1-211ENST00000533492 PPP2CAP67775 309 aa15.8■□□□□ 0.12
CPSF1-211ENST00000533492 TYRO3Q06418 890 aa15.8■□□□□ 0.12
CPSF1-211ENST00000533492 SLC20A2Q08357 652 aa15.8■□□□□ 0.12
CPSF1-211ENST00000533492 NCAPHQ15003 741 aa15.8■□□□□ 0.12
CPSF1-211ENST00000533492 CLEC16AQ2KHT3 1053 aa15.8■□□□□ 0.12
CPSF1-211ENST00000533492 INAVAQ3KP66 663 aa15.8■□□□□ 0.12
CPSF1-211ENST00000533492 PRAMEF14Q5SWL7 426 aa15.8■□□□□ 0.12
CPSF1-211ENST00000533492 RWDD4Q6NW29 188 aaKnown RBP15.8■□□□□ 0.12
CPSF1-211ENST00000533492 STRADAQ7RTN6 431 aa15.8■□□□□ 0.12
CPSF1-211ENST00000533492 RAB44Q7Z6P3 723 aaPredicted RBP15.8■□□□□ 0.12
CPSF1-211ENST00000533492 DRC7Q8IY82 874 aa15.8■□□□□ 0.12
CPSF1-211ENST00000533492 ADAMTS14Q8WXS8 1223 aa15.8■□□□□ 0.12
CPSF1-211ENST00000533492 GDF3Q9NR23 364 aa15.8■□□□□ 0.12
CPSF1-211ENST00000533492 PPARGC1AQ9UBK2 798 aaKnown RBP15.8■□□□□ 0.12
CPSF1-211ENST00000533492 DOCK4Q8N1I0 1966 aa15.8■□□□□ 0.12
CPSF1-211ENST00000533492 PLXNA2O75051 1894 aa15.8■□□□□ 0.12
CPSF1-211ENST00000533492 A0A1B0GTQ1 180 aa15.79■□□□□ 0.12
CPSF1-211ENST00000533492 GOLGA8CPA6NN73 597 aa15.79■□□□□ 0.12
CPSF1-211ENST00000533492 PCDHGA12O60330 932 aa15.79■□□□□ 0.12
CPSF1-211ENST00000533492 PRNPP04156 253 aa15.79■□□□□ 0.12
CPSF1-211ENST00000533492 WNT1P04628 370 aa15.79■□□□□ 0.12
CPSF1-211ENST00000533492 GPD1P21695 349 aa15.79■□□□□ 0.12
CPSF1-211ENST00000533492 GLDCP23378 1020 aa15.79■□□□□ 0.12
CPSF1-211ENST00000533492 NUDT1P36639 197 aa15.79■□□□□ 0.12
CPSF1-211ENST00000533492 DNA2P51530 1060 aa15.79■□□□□ 0.12
CPSF1-211ENST00000533492 IL9RQ01113 521 aa15.79■□□□□ 0.12
CPSF1-211ENST00000533492 GNA12Q03113 381 aa15.79■□□□□ 0.12
CPSF1-211ENST00000533492 STAT4Q14765 748 aa15.79■□□□□ 0.12
CPSF1-211ENST00000533492 RAB6CQ53S08 254 aa15.79■□□□□ 0.12
CPSF1-211ENST00000533492 AGBL4Q5VU57 503 aa15.79■□□□□ 0.12
CPSF1-211ENST00000533492 NAPEPLDQ6IQ20 393 aa15.79■□□□□ 0.12
CPSF1-211ENST00000533492 SLCO6A1Q86UG4 719 aa15.79■□□□□ 0.12
CPSF1-211ENST00000533492 PHF13Q86YI8 300 aaPredicted RBP15.79■□□□□ 0.12
CPSF1-211ENST00000533492 TMIEQ8NEW7 156 aa15.79■□□□□ 0.12
CPSF1-211ENST00000533492 OR2A12Q8NGT7 310 aa15.79■□□□□ 0.12
CPSF1-211ENST00000533492 FAM172AQ8WUF8 416 aa15.79■□□□□ 0.12
CPSF1-211ENST00000533492 FAM131CQ96AQ9 280 aa15.79■□□□□ 0.12
CPSF1-211ENST00000533492 ELF4Q99607 663 aaPredicted RBP15.79■□□□□ 0.12
CPSF1-211ENST00000533492 AGPAT1Q99943 283 aa15.79■□□□□ 0.12
CPSF1-211ENST00000533492 RAB6CQ9H0N0 254 aa15.79■□□□□ 0.12
CPSF1-211ENST00000533492 OSBPL2Q9H1P3 480 aa15.79■□□□□ 0.12
CPSF1-211ENST00000533492 TNKS2Q9H2K2 1166 aa15.79■□□□□ 0.12
CPSF1-211ENST00000533492 DMTF1Q9Y222 760 aa15.79■□□□□ 0.12
CPSF1-211ENST00000533492 BTBD3Q9Y2F9 522 aa15.79■□□□□ 0.12
CPSF1-211ENST00000533492 A0A1W2PR77 199 aa15.78■□□□□ 0.12
CPSF1-211ENST00000533492 ANKRD62A6NC57 917 aa15.78■□□□□ 0.12
CPSF1-211ENST00000533492 TMEM8BA6NDV4 472 aa15.78■□□□□ 0.12
CPSF1-211ENST00000533492 SMTNL1A8MU46 457 aa15.78■□□□□ 0.12
CPSF1-211ENST00000533492 C10orf142B7Z368 130 aa15.78■□□□□ 0.12
CPSF1-211ENST00000533492 TLR4O00206 839 aa15.78■□□□□ 0.12
CPSF1-211ENST00000533492 WNT9AO14904 365 aa15.78■□□□□ 0.12
CPSF1-211ENST00000533492 LATO43561 262 aa15.78■□□□□ 0.12
CPSF1-211ENST00000533492 MAGEC1O60732 1142 aa15.78■□□□□ 0.12
CPSF1-211ENST00000533492 CTSLP07711 333 aa15.78■□□□□ 0.12
CPSF1-211ENST00000533492 ATP1A3P13637 1013 aa15.78■□□□□ 0.12
CPSF1-211ENST00000533492 FERP16591 822 aa15.78■□□□□ 0.12
CPSF1-211ENST00000533492 RFC1P35251 1148 aaPredicted RBP15.78■□□□□ 0.12
CPSF1-211ENST00000533492 ETFBP38117 255 aa15.78■□□□□ 0.12
CPSF1-211ENST00000533492 GSCP56915 257 aaPredicted RBP15.78■□□□□ 0.12
CPSF1-211ENST00000533492 NRG1Q02297 640 aaPredicted RBP15.78■□□□□ 0.12
CPSF1-211ENST00000533492 PTP4A2Q12974 167 aa15.78■□□□□ 0.12
CPSF1-211ENST00000533492 ANO6Q4KMQ2 910 aa15.78■□□□□ 0.12
CPSF1-211ENST00000533492 SETMARQ53H47 684 aaPredicted RBP15.78■□□□□ 0.12
CPSF1-211ENST00000533492 ARSIQ5FYB1 569 aa15.78■□□□□ 0.12
CPSF1-211ENST00000533492 C22orf39Q6P5X5 142 aa15.78■□□□□ 0.12
CPSF1-211ENST00000533492 WDR59Q6PJI9 974 aa15.78■□□□□ 0.12
CPSF1-211ENST00000533492 TRIM69Q86WT6 500 aa15.78■□□□□ 0.12
CPSF1-211ENST00000533492 MFSD2AQ8NA29 543 aa15.78■□□□□ 0.12
CPSF1-211ENST00000533492 CHST14Q8NCH0 376 aa15.78■□□□□ 0.12
CPSF1-211ENST00000533492 C3orf20Q8ND61 904 aa15.78■□□□□ 0.12
CPSF1-211ENST00000533492 GATA6Q92908 595 aa15.78■□□□□ 0.12
CPSF1-211ENST00000533492 PPP1R16AQ96I34 528 aa15.78■□□□□ 0.12
CPSF1-211ENST00000533492 RETREG1Q9H6L5 497 aa15.78■□□□□ 0.12
CPSF1-211ENST00000533492 PREBQ9HCU5 417 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms