RNA–Protein interactions for RNA: ENST00000533482.5

RAD50-209, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 1 (best)

Gene RAD50, Length 4,373 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-209ENST00000533482 DENND1CQ8IV53 801 aa12.61□□□□□ -0.39
RAD50-209ENST00000533482 UNC5BQ8IZJ1 945 aa12.61□□□□□ -0.39
RAD50-209ENST00000533482 RSPH1Q8WYR4 309 aa12.61□□□□□ -0.39
RAD50-209ENST00000533482 AZIN2Q96A70 460 aa12.61□□□□□ -0.39
RAD50-209ENST00000533482 ZNF333Q96JL9 665 aa12.61□□□□□ -0.39
RAD50-209ENST00000533482 PPP1R2P1Q96PQ5 205 aa12.61□□□□□ -0.39
RAD50-209ENST00000533482 CHRAC1Q9NRG0 131 aa12.61□□□□□ -0.39
RAD50-209ENST00000533482 ZNF112Q9UJU3 913 aa12.61□□□□□ -0.39
RAD50-209ENST00000533482 MAP1BP46821 2468 aaKnown RBP12.61□□□□□ -0.39
RAD50-209ENST00000533482 EME2A4GXA9 379 aaPredicted RBP12.61□□□□□ -0.39
RAD50-209ENST00000533482 DUSP11O75319 330 aaKnown RBP12.61□□□□□ -0.39
RAD50-209ENST00000533482 ARHGDIAP52565 204 aa12.61□□□□□ -0.39
RAD50-209ENST00000533482 OTOP3Q7RTS5 596 aa12.61□□□□□ -0.39
RAD50-209ENST00000533482 IL22Q9GZX6 179 aa12.61□□□□□ -0.39
RAD50-209ENST00000533482 POMKQ9H5K3 350 aa12.61□□□□□ -0.39
RAD50-209ENST00000533482 ALG9Q9H6U8 611 aa12.61□□□□□ -0.39
RAD50-209ENST00000533482 PMM2O15305 246 aa12.61□□□□□ -0.39
RAD50-209ENST00000533482 METTL18O95568 372 aa12.61□□□□□ -0.39
RAD50-209ENST00000533482 CCDC166P0CW27 439 aa12.61□□□□□ -0.39
RAD50-209ENST00000533482 ZBTB48P10074 688 aaPredicted RBP12.61□□□□□ -0.39
RAD50-209ENST00000533482 POM121L1PQ3SYA9 428 aa12.61□□□□□ -0.39
RAD50-209ENST00000533482 UBAP2Q5T6F2 1119 aaKnown RBP12.61□□□□□ -0.39
RAD50-209ENST00000533482 ZNF618Q5T7W0 954 aa12.61□□□□□ -0.39
RAD50-209ENST00000533482 ADGRD1Q6QNK2 874 aa12.61□□□□□ -0.39
RAD50-209ENST00000533482 SLC35B2Q8TB61 432 aa12.61□□□□□ -0.39
RAD50-209ENST00000533482 UPF1Q92900 1129 aaKnown RBP eCLIP12.61□□□□□ -0.39
RAD50-209ENST00000533482 MTIF3Q9H2K0 278 aaKnown RBP12.61□□□□□ -0.39
RAD50-209ENST00000533482 PNMA8BQ9ULN7 279 aaPredicted RBP12.61□□□□□ -0.39
RAD50-209ENST00000533482 CHKBQ9Y259 395 aa12.61□□□□□ -0.39
RAD50-209ENST00000533482 PLLPQ9Y342 182 aa12.61□□□□□ -0.39
RAD50-209ENST00000533482 YJEFN3A6XGL0 299 aa12.6□□□□□ -0.39
RAD50-209ENST00000533482 E7ENQ6 273 aa12.6□□□□□ -0.39
RAD50-209ENST00000533482 TLR5O60602 858 aa12.6□□□□□ -0.39
RAD50-209ENST00000533482 FKBP6O75344 327 aa12.6□□□□□ -0.39
RAD50-209ENST00000533482 KATNA1O75449 491 aa12.6□□□□□ -0.39
RAD50-209ENST00000533482 C2P06681 752 aa12.6□□□□□ -0.39
RAD50-209ENST00000533482 PBLDP30039 288 aaPredicted RBP12.6□□□□□ -0.39
RAD50-209ENST00000533482 ATP5C1P36542 298 aaKnown RBP12.6□□□□□ -0.39
RAD50-209ENST00000533482 SOWAHAQ2M3V2 549 aa12.6□□□□□ -0.39
RAD50-209ENST00000533482 PIGWQ7Z7B1 504 aa12.6□□□□□ -0.39
RAD50-209ENST00000533482 SNX31Q8N9S9 440 aa12.6□□□□□ -0.39
RAD50-209ENST00000533482 OR6K2Q8NGY2 324 aa12.6□□□□□ -0.39
RAD50-209ENST00000533482 GDPD5Q8WTR4 605 aa12.6□□□□□ -0.39
RAD50-209ENST00000533482 APBB2Q92870 758 aa12.6□□□□□ -0.39
RAD50-209ENST00000533482 VPS50Q96JG6 964 aa12.6□□□□□ -0.39
RAD50-209ENST00000533482 MID1IP1Q9NPA3 183 aa12.6□□□□□ -0.39
RAD50-209ENST00000533482 AAASQ9NRG9 546 aa12.6□□□□□ -0.39
RAD50-209ENST00000533482 GID8Q9NWU2 228 aa12.6□□□□□ -0.39
RAD50-209ENST00000533482 WWOXQ9NZC7 414 aa12.6□□□□□ -0.39
RAD50-209ENST00000533482 SNX5Q9Y5X3 404 aa12.6□□□□□ -0.39
RAD50-209ENST00000533482 ARL5CA6NH57 179 aa12.6□□□□□ -0.39
RAD50-209ENST00000533482 SMNDC1O75940 238 aaKnown RBP eCLIP12.6□□□□□ -0.39
RAD50-209ENST00000533482 RPL17P18621 184 aaKnown RBP12.6□□□□□ -0.39
RAD50-209ENST00000533482 GRIA4P48058 902 aa12.6□□□□□ -0.39
RAD50-209ENST00000533482 MSS51Q4VC12 460 aa12.6□□□□□ -0.39
RAD50-209ENST00000533482 ZNF786Q8N393 782 aa12.6□□□□□ -0.39
RAD50-209ENST00000533482 NMD3Q96D46 503 aaKnown RBP12.6□□□□□ -0.39
RAD50-209ENST00000533482 SEMA3CQ99985 751 aa12.6□□□□□ -0.39
RAD50-209ENST00000533482 CNGB3Q9NQW8 809 aa12.6□□□□□ -0.39
RAD50-209ENST00000533482 TBC1D13Q9NVG8 400 aa12.6□□□□□ -0.39
RAD50-209ENST00000533482 LRCH1Q9Y2L9 728 aa12.6□□□□□ -0.39
RAD50-209ENST00000533482 GIT1Q9Y2X7 761 aa12.6□□□□□ -0.39
RAD50-209ENST00000533482 VPS26AO75436 327 aa12.6□□□□□ -0.39
RAD50-209ENST00000533482 RPLP2P05387 115 aaKnown RBP12.6□□□□□ -0.39
RAD50-209ENST00000533482 RIPOR1Q6ZS17 1223 aa12.6□□□□□ -0.39
RAD50-209ENST00000533482 PGBD3Q8N328 593 aa12.6□□□□□ -0.39
RAD50-209ENST00000533482 GSTCDQ8NEC7 633 aa12.6□□□□□ -0.39
RAD50-209ENST00000533482 SCAMP5Q8TAC9 235 aa12.6□□□□□ -0.39
RAD50-209ENST00000533482 ECSITQ9BQ95 431 aa12.6□□□□□ -0.39
RAD50-209ENST00000533482 HERPUD2Q9BSE4 406 aa12.6□□□□□ -0.39
RAD50-209ENST00000533482 PHACTR1Q9C0D0 580 aa12.6□□□□□ -0.39
RAD50-209ENST00000533482 KLHL4Q9C0H6 718 aa12.6□□□□□ -0.39
RAD50-209ENST00000533482 CLPBQ9H078 707 aa12.6□□□□□ -0.39
RAD50-209ENST00000533482 ARHGEF4Q9NR80 690 aa12.6□□□□□ -0.39
RAD50-209ENST00000533482 XPR1Q9UBH6 696 aa12.6□□□□□ -0.39
RAD50-209ENST00000533482 MYO7AQ13402 2215 aa12.6□□□□□ -0.39
RAD50-209ENST00000533482 HEATR9A2RTY3 570 aa12.6□□□□□ -0.39
RAD50-209ENST00000533482 SAC3D1A6NKF1 404 aa12.6□□□□□ -0.39
RAD50-209ENST00000533482 CCL22O00626 93 aa12.6□□□□□ -0.39
RAD50-209ENST00000533482 ZNF197O14709 1029 aa12.6□□□□□ -0.39
RAD50-209ENST00000533482 PRPF4O43172 522 aaKnown RBP eCLIP12.6□□□□□ -0.39
RAD50-209ENST00000533482 PAGE1O75459 146 aa12.6□□□□□ -0.39
RAD50-209ENST00000533482 BPGMP07738 259 aa12.6□□□□□ -0.39
RAD50-209ENST00000533482 CDH13P55290 713 aa12.6□□□□□ -0.39
RAD50-209ENST00000533482 TAF10Q12962 218 aa12.6□□□□□ -0.39
RAD50-209ENST00000533482 TARBP2Q15633 366 aaKnown RBP12.6□□□□□ -0.39
RAD50-209ENST00000533482 MIER2Q8N344 545 aa12.6□□□□□ -0.39
RAD50-209ENST00000533482 SPATA22Q8NHS9 363 aa12.6□□□□□ -0.39
RAD50-209ENST00000533482 CCDC126Q96EE4 140 aa12.6□□□□□ -0.39
RAD50-209ENST00000533482 SNX27Q96L92 541 aa12.6□□□□□ -0.39
RAD50-209ENST00000533482 ZNF317Q96PQ6 595 aaPredicted RBP12.6□□□□□ -0.39
RAD50-209ENST00000533482 SEMA6AQ9H2E6 1030 aa12.6□□□□□ -0.39
RAD50-209ENST00000533482 ZNF395Q9H8N7 513 aaPredicted RBP12.6□□□□□ -0.39
RAD50-209ENST00000533482 COPS7BQ9H9Q2 264 aaPredicted RBP12.6□□□□□ -0.39
RAD50-209ENST00000533482 BPIFA1Q9NP55 256 aa12.6□□□□□ -0.39
RAD50-209ENST00000533482 TMPRSS4Q9NRS4 437 aa12.6□□□□□ -0.39
RAD50-209ENST00000533482 PKD2L2Q9NZM6 624 aa12.6□□□□□ -0.39
RAD50-209ENST00000533482 LGALS13Q9UHV8 139 aa12.6□□□□□ -0.39
RAD50-209ENST00000533482 MYH11P35749 1972 aa12.59□□□□□ -0.39
RAD50-209ENST00000533482 PEX1O43933 1283 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms