RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 DNMT3LQ9UJW3 386 aa17.8■□□□□ 0.44
PHRF1-205ENST00000533464 SMNDC1O75940 238 aaKnown RBP eCLIP17.8■□□□□ 0.446e-7■■■■□ 25.7
PHRF1-205ENST00000533464 TTC27Q6P3X3 843 aa17.8■□□□□ 0.44
PHRF1-205ENST00000533464 DCLRE1AQ6PJP8 1040 aa17.8■□□□□ 0.44
PHRF1-205ENST00000533464 TNS4Q8IZW8 715 aa17.8■□□□□ 0.44
PHRF1-205ENST00000533464 MCOLN3Q8TDD5 553 aa17.8■□□□□ 0.44
PHRF1-205ENST00000533464 ASB2Q96Q27 587 aa17.8■□□□□ 0.44
PHRF1-205ENST00000533464 OMDQ99983 421 aa17.8■□□□□ 0.44
PHRF1-205ENST00000533464 TBC1D10AQ9BXI6 508 aa17.8■□□□□ 0.44
PHRF1-205ENST00000533464 ACE2Q9BYF1 805 aaPredicted RBP17.8■□□□□ 0.44
PHRF1-205ENST00000533464 NOCTQ9UK39 431 aaKnown RBP17.8■□□□□ 0.44
PHRF1-205ENST00000533464 DLG5Q8TDM6 1919 aa17.8■□□□□ 0.44
PHRF1-205ENST00000533464 OOSP2Q86WS3 158 aa17.8■□□□□ 0.44
PHRF1-205ENST00000533464 STX19Q8N4C7 294 aa17.8■□□□□ 0.44
PHRF1-205ENST00000533464 OR6Y1Q8NGX8 325 aa17.8■□□□□ 0.44
PHRF1-205ENST00000533464 FIG4Q92562 907 aa17.8■□□□□ 0.44
PHRF1-205ENST00000533464 VPS33AQ96AX1 596 aa17.8■□□□□ 0.44
PHRF1-205ENST00000533464 FCRL2Q96LA5 508 aaPredicted RBP17.8■□□□□ 0.44
PHRF1-205ENST00000533464 C2orf49Q9BVC5 232 aaPredicted RBP17.8■□□□□ 0.44
PHRF1-205ENST00000533464 PDZD7Q9H5P4 517 aa17.8■□□□□ 0.44
PHRF1-205ENST00000533464 SYNDIG1Q9H7V2 258 aa17.8■□□□□ 0.44
PHRF1-205ENST00000533464 SH3BP4Q9P0V3 963 aa17.8■□□□□ 0.44
PHRF1-205ENST00000533464 WRAP73Q9P2S5 460 aaPredicted RBP17.8■□□□□ 0.44
PHRF1-205ENST00000533464 LRCH1Q9Y2L9 728 aa17.8■□□□□ 0.44
PHRF1-205ENST00000533464 ADGRA3Q8IWK6 1321 aa17.79■□□□□ 0.44
PHRF1-205ENST00000533464 CCDC154A6NI56 674 aa17.79■□□□□ 0.44
PHRF1-205ENST00000533464 ADSSP30520 456 aa17.79■□□□□ 0.44
PHRF1-205ENST00000533464 ADRA1BP35368 520 aa17.79■□□□□ 0.44
PHRF1-205ENST00000533464 RANBP1P43487 201 aa17.79■□□□□ 0.44
PHRF1-205ENST00000533464 CTBP1Q13363 440 aa17.79■□□□□ 0.44
PHRF1-205ENST00000533464 PABPC1LQ4VXU2 614 aaKnown RBP17.79■□□□□ 0.44
PHRF1-205ENST00000533464 OTUD3Q5T2D3 398 aaPredicted RBP17.79■□□□□ 0.44
PHRF1-205ENST00000533464 LRRC49Q8IUZ0 686 aa17.79■□□□□ 0.44
PHRF1-205ENST00000533464 PHACTR4Q8IZ21 702 aa17.79■□□□□ 0.44
PHRF1-205ENST00000533464 ZSCAN18Q8TBC5 510 aaPredicted RBP17.79■□□□□ 0.44
PHRF1-205ENST00000533464 STAG3L4Q8TBR4 150 aa17.79■□□□□ 0.44
PHRF1-205ENST00000533464 FNIP1Q8TF40 1166 aa17.79■□□□□ 0.44
PHRF1-205ENST00000533464 KCTD4Q8WVF5 259 aa17.79■□□□□ 0.44
PHRF1-205ENST00000533464 TMEM79Q9BSE2 394 aa17.79■□□□□ 0.44
PHRF1-205ENST00000533464 LTN1O94822 1766 aa17.79■□□□□ 0.44
PHRF1-205ENST00000533464 BTBD19C9JJ37 291 aa17.79■□□□□ 0.44
PHRF1-205ENST00000533464 OR56A5P0C7T3 313 aa17.79■□□□□ 0.44
PHRF1-205ENST00000533464 PIRTP0C851 137 aa17.79■□□□□ 0.44
PHRF1-205ENST00000533464 PWP1Q13610 501 aa17.79■□□□□ 0.44
PHRF1-205ENST00000533464 FRG1Q14331 258 aaKnown RBP17.79■□□□□ 0.44
PHRF1-205ENST00000533464 FAM110CQ1W6H9 321 aa17.79■□□□□ 0.44
PHRF1-205ENST00000533464 SLC35G1Q2M3R5 365 aa17.79■□□□□ 0.44
PHRF1-205ENST00000533464 RGMBQ6NW40 437 aa17.79■□□□□ 0.44
PHRF1-205ENST00000533464 ERAP2Q6P179 960 aa17.79■□□□□ 0.44
PHRF1-205ENST00000533464 ARCQ7LC44 396 aa17.79■□□□□ 0.44
PHRF1-205ENST00000533464 PCDH20Q8N6Y1 951 aaKnown RBP17.79■□□□□ 0.44
PHRF1-205ENST00000533464 CSPG4P5Q96PW8 444 aa17.79■□□□□ 0.44
PHRF1-205ENST00000533464 CAPN10Q9HC96 672 aa17.79■□□□□ 0.44
PHRF1-205ENST00000533464 SIX2Q9NPC8 291 aa17.79■□□□□ 0.44
PHRF1-205ENST00000533464 SORCS3Q9UPU3 1222 aa17.79■□□□□ 0.44
PHRF1-205ENST00000533464 SOWAHBA6NEL2 793 aa17.79■□□□□ 0.44
PHRF1-205ENST00000533464 PRKAR2AP13861 404 aaKnown RBP17.79■□□□□ 0.44
PHRF1-205ENST00000533464 ATP5F1P24539 256 aaPredicted RBP17.79■□□□□ 0.44
PHRF1-205ENST00000533464 CDKN2BP42772 138 aa17.79■□□□□ 0.44
PHRF1-205ENST00000533464 PSEN1P49768 467 aa17.79■□□□□ 0.44
PHRF1-205ENST00000533464 CACNA2D1P54289 1103 aa17.79■□□□□ 0.44
PHRF1-205ENST00000533464 SLC25A3Q00325 362 aa17.79■□□□□ 0.44
PHRF1-205ENST00000533464 GBE1Q04446 702 aa17.79■□□□□ 0.44
PHRF1-205ENST00000533464 MAD2L1Q13257 205 aaPredicted RBP17.79■□□□□ 0.44
PHRF1-205ENST00000533464 IKBKEQ14164 716 aa17.79■□□□□ 0.44
PHRF1-205ENST00000533464 PRMT9Q6P2P2 845 aa17.79■□□□□ 0.44
PHRF1-205ENST00000533464 ZFP42Q96MM3 310 aa17.79■□□□□ 0.44
PHRF1-205ENST00000533464 ANKRD27Q96NW4 1050 aa17.79■□□□□ 0.44
PHRF1-205ENST00000533464 PANX3Q96QZ0 392 aa17.79■□□□□ 0.44
PHRF1-205ENST00000533464 SENP6Q9GZR1 1112 aaPredicted RBP17.79■□□□□ 0.44
PHRF1-205ENST00000533464 COMMD8Q9NX08 183 aa17.79■□□□□ 0.44
PHRF1-205ENST00000533464 AP4S1Q9Y587 144 aa17.79■□□□□ 0.44
PHRF1-205ENST00000533464 CNTNAP1P78357 1384 aa17.79■□□□□ 0.44
PHRF1-205ENST00000533464 PSMD12O00232 456 aaPredicted RBP17.79■□□□□ 0.44
PHRF1-205ENST00000533464 PCDH8O95206 1070 aa17.79■□□□□ 0.44
PHRF1-205ENST00000533464 GRIA4P48058 902 aa17.79■□□□□ 0.44
PHRF1-205ENST00000533464 GRIK3Q13003 919 aa17.79■□□□□ 0.44
PHRF1-205ENST00000533464 ZNF398Q8TD17 642 aa17.79■□□□□ 0.44
PHRF1-205ENST00000533464 MPP6Q9NZW5 540 aa17.79■□□□□ 0.44
PHRF1-205ENST00000533464 DPP7Q9UHL4 492 aa17.79■□□□□ 0.44
PHRF1-205ENST00000533464 NR2E1Q9Y466 385 aa17.79■□□□□ 0.44
PHRF1-205ENST00000533464 KNDC1Q76NI1 1749 aa17.79■□□□□ 0.44
PHRF1-205ENST00000533464 MSCO60682 206 aa17.78■□□□□ 0.44
PHRF1-205ENST00000533464 AMHP03971 560 aa17.78■□□□□ 0.44
PHRF1-205ENST00000533464 VCLP18206 1134 aa17.78■□□□□ 0.44
PHRF1-205ENST00000533464 TFEBP19484 476 aa17.78■□□□□ 0.44
PHRF1-205ENST00000533464 IRX1P78414 480 aaPredicted RBP17.78■□□□□ 0.44
PHRF1-205ENST00000533464 ADRM1Q16186 407 aa17.78■□□□□ 0.44
PHRF1-205ENST00000533464 DENND1CQ8IV53 801 aa17.78■□□□□ 0.44
PHRF1-205ENST00000533464 PYDC1Q8WXC3 89 aa17.78■□□□□ 0.44
PHRF1-205ENST00000533464 ABHD8Q96I13 439 aa17.78■□□□□ 0.44
PHRF1-205ENST00000533464 APOBEC3GQ9HC16 384 aaKnown RBP17.78■□□□□ 0.44
PHRF1-205ENST00000533464 FBXO5Q9UKT4 447 aa17.78■□□□□ 0.44
PHRF1-205ENST00000533464 CHRNB2P17787 502 aa17.78■□□□□ 0.44
PHRF1-205ENST00000533464 CCT8P50990 548 aa17.78■□□□□ 0.44
PHRF1-205ENST00000533464 NCALDP61601 193 aa17.78■□□□□ 0.44
PHRF1-205ENST00000533464 FKBP1BP68106 108 aa17.78■□□□□ 0.44
PHRF1-205ENST00000533464 SAMD4BQ5PRF9 694 aaKnown RBP17.78■□□□□ 0.44
PHRF1-205ENST00000533464 DAW1Q8N136 415 aa17.78■□□□□ 0.44
PHRF1-205ENST00000533464 STK40Q8N2I9 435 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms