RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 KIF17Q9P2E2 1029 aa12.43□□□□□ -0.42
BDNF-218ENST00000533246 RGPD2P0DJD1 1756 aa12.43□□□□□ -0.42
BDNF-218ENST00000533246 NCAM2O15394 837 aa12.42□□□□□ -0.42
BDNF-218ENST00000533246 B3GALNT1O75752 331 aa12.42□□□□□ -0.42
BDNF-218ENST00000533246 RHOCP08134 193 aa12.42□□□□□ -0.42
BDNF-218ENST00000533246 F7P08709 466 aaPredicted RBP12.42□□□□□ -0.42
BDNF-218ENST00000533246 MAP4P27816 1152 aaKnown RBP12.42□□□□□ -0.42
BDNF-218ENST00000533246 NDUFV1P49821 464 aa12.42□□□□□ -0.42
BDNF-218ENST00000533246 ABCE1P61221 599 aaKnown RBP12.42□□□□□ -0.42
BDNF-218ENST00000533246 MRPS22P82650 360 aaKnown RBP12.42□□□□□ -0.42
BDNF-218ENST00000533246 DAB2P98082 770 aa12.42□□□□□ -0.42
BDNF-218ENST00000533246 C16orf59Q7L2K0 433 aa12.42□□□□□ -0.42
BDNF-218ENST00000533246 SCAIQ8N9R8 606 aa12.42□□□□□ -0.42
BDNF-218ENST00000533246 ZNF333Q96JL9 665 aa12.42□□□□□ -0.42
BDNF-218ENST00000533246 KLHL5Q96PQ7 755 aa12.42□□□□□ -0.42
BDNF-218ENST00000533246 NTPCRQ9BSD7 190 aaKnown RBP12.42□□□□□ -0.42
BDNF-218ENST00000533246 MINDY3Q9H8M7 445 aa12.42□□□□□ -0.42
BDNF-218ENST00000533246 ATAD3AQ9NVI7 634 aa12.42□□□□□ -0.42
BDNF-218ENST00000533246 PHF24Q9UPV7 400 aa12.42□□□□□ -0.42
BDNF-218ENST00000533246 ZNF536O15090 1300 aa12.42□□□□□ -0.42
BDNF-218ENST00000533246 CHADO15335 359 aa12.42□□□□□ -0.42
BDNF-218ENST00000533246 MSI1O43347 362 aaKnown RBP12.42□□□□□ -0.42
BDNF-218ENST00000533246 LMO2P25791 158 aa12.42□□□□□ -0.42
BDNF-218ENST00000533246 CDH13P55290 713 aa12.42□□□□□ -0.42
BDNF-218ENST00000533246 TBCCQ15814 346 aa12.42□□□□□ -0.42
BDNF-218ENST00000533246 RAP1GAP2Q684P5 730 aa12.42□□□□□ -0.42
BDNF-218ENST00000533246 ECHDC2Q86YB7 292 aa12.42□□□□□ -0.42
BDNF-218ENST00000533246 PSTKQ8IV42 348 aaKnown RBP12.42□□□□□ -0.42
BDNF-218ENST00000533246 KYQ8NBH2 561 aa12.42□□□□□ -0.42
BDNF-218ENST00000533246 SLC4A11Q8NBS3 891 aa12.42□□□□□ -0.42
BDNF-218ENST00000533246 C17orf80Q9BSJ5 609 aa12.42□□□□□ -0.42
BDNF-218ENST00000533246 MTG1Q9BT17 334 aaPredicted RBP12.42□□□□□ -0.42
BDNF-218ENST00000533246 ST6GALNAC4Q9H4F1 302 aa12.42□□□□□ -0.42
BDNF-218ENST00000533246 RGS18Q9NS28 235 aa12.42□□□□□ -0.42
BDNF-218ENST00000533246 MKL2Q9ULH7 1088 aa12.42□□□□□ -0.42
BDNF-218ENST00000533246 TBKBP1A7MCY6 615 aa12.42□□□□□ -0.42
BDNF-218ENST00000533246 NFKBIEO00221 500 aa12.42□□□□□ -0.42
BDNF-218ENST00000533246 PRPF4O43172 522 aaKnown RBP eCLIP12.42□□□□□ -0.42
BDNF-218ENST00000533246 EDF1O60869 148 aaKnown RBP12.42□□□□□ -0.42
BDNF-218ENST00000533246 CILPO75339 1184 aa12.42□□□□□ -0.42
BDNF-218ENST00000533246 UNGP13051 313 aaPredicted RBP12.42□□□□□ -0.42
BDNF-218ENST00000533246 HNRNPLP14866 589 aaKnown RBP eCLIP12.42□□□□□ -0.42
BDNF-218ENST00000533246 RHOAP61586 193 aa12.42□□□□□ -0.42
BDNF-218ENST00000533246 NCALDP61601 193 aa12.42□□□□□ -0.42
BDNF-218ENST00000533246 POLD3Q15054 466 aaPredicted RBP12.42□□□□□ -0.42
BDNF-218ENST00000533246 OTUD3Q5T2D3 398 aaPredicted RBP12.42□□□□□ -0.42
BDNF-218ENST00000533246 RNF19BQ6ZMZ0 732 aa12.42□□□□□ -0.42
BDNF-218ENST00000533246 UNC93AQ86WB7 457 aa12.42□□□□□ -0.42
BDNF-218ENST00000533246 SLC41A1Q8IVJ1 513 aa12.42□□□□□ -0.42
BDNF-218ENST00000533246 LGI2Q8N0V4 545 aa12.42□□□□□ -0.42
BDNF-218ENST00000533246 CLEC4CQ8WTT0 213 aa12.42□□□□□ -0.42
BDNF-218ENST00000533246 KCTD4Q8WVF5 259 aa12.42□□□□□ -0.42
BDNF-218ENST00000533246 TWNKQ96RR1 684 aa12.42□□□□□ -0.42
BDNF-218ENST00000533246 ATP13A1Q9HD20 1204 aa12.42□□□□□ -0.42
BDNF-218ENST00000533246 CIDEBQ9UHD4 219 aa12.42□□□□□ -0.42
BDNF-218ENST00000533246 HBS1LQ9Y450 684 aaKnown RBP12.42□□□□□ -0.42
BDNF-218ENST00000533246 MAFBQ9Y5Q3 323 aaPredicted RBP12.42□□□□□ -0.42
BDNF-218ENST00000533246 SNX10Q9Y5X0 201 aa12.42□□□□□ -0.42
BDNF-218ENST00000533246 RP1L1Q8IWN7 2480 aaPredicted RBP12.42□□□□□ -0.42
BDNF-218ENST00000533246 SAC3D1A6NKF1 404 aa12.41□□□□□ -0.42
BDNF-218ENST00000533246 EIF3FO00303 357 aaPredicted RBP12.41□□□□□ -0.42
BDNF-218ENST00000533246 ARIH2O95376 493 aa12.41□□□□□ -0.42
BDNF-218ENST00000533246 CNTFP26441 200 aa12.41□□□□□ -0.42
BDNF-218ENST00000533246 TKTP29401 623 aaKnown RBP12.41□□□□□ -0.42
BDNF-218ENST00000533246 HDAC4P56524 1084 aa12.41□□□□□ -0.42
BDNF-218ENST00000533246 TIGD7Q6NT04 549 aaPredicted RBP12.41□□□□□ -0.42
BDNF-218ENST00000533246 RIPOR1Q6ZS17 1223 aa12.41□□□□□ -0.42
BDNF-218ENST00000533246 CACUL1Q86Y37 369 aa12.41□□□□□ -0.42
BDNF-218ENST00000533246 SLC44A2Q8IWA5 706 aaPredicted RBP12.41□□□□□ -0.42
BDNF-218ENST00000533246 ACOX2Q99424 681 aa12.41□□□□□ -0.42
BDNF-218ENST00000533246 GPBP1L1Q9HC44 474 aaPredicted RBP12.41□□□□□ -0.42
BDNF-218ENST00000533246 SYBUQ9NX95 663 aa12.41□□□□□ -0.42
BDNF-218ENST00000533246 ZNF229Q9UJW7 825 aa12.41□□□□□ -0.42
BDNF-218ENST00000533246 STARD13Q9Y3M8 1113 aa12.41□□□□□ -0.42
BDNF-218ENST00000533246 XRN1Q8IZH2 1706 aaKnown RBP12.41□□□□□ -0.42
BDNF-218ENST00000533246 VPS26AO75436 327 aa12.41□□□□□ -0.42
BDNF-218ENST00000533246 ZNF23P17027 643 aa12.41□□□□□ -0.42
BDNF-218ENST00000533246 MATKP42679 507 aa12.41□□□□□ -0.42
BDNF-218ENST00000533246 BNIP1Q12981 228 aa12.41□□□□□ -0.42
BDNF-218ENST00000533246 SPDYCQ5MJ68 293 aa12.41□□□□□ -0.42
BDNF-218ENST00000533246 SLC39A4Q6P5W5 647 aa12.41□□□□□ -0.42
BDNF-218ENST00000533246 SETD3Q86TU7 594 aaPredicted RBP12.41□□□□□ -0.42
BDNF-218ENST00000533246 GATAD2AQ86YP4 633 aa12.41□□□□□ -0.42
BDNF-218ENST00000533246 UCMAQ8WVF2 138 aa12.41□□□□□ -0.42
BDNF-218ENST00000533246 CSPG4P5Q96PW8 444 aa12.41□□□□□ -0.42
BDNF-218ENST00000533246 NMUR2Q9GZQ4 415 aa12.41□□□□□ -0.42
BDNF-218ENST00000533246 ALG9Q9H6U8 611 aa12.41□□□□□ -0.42
BDNF-218ENST00000533246 MID1IP1Q9NPA3 183 aa12.41□□□□□ -0.42
BDNF-218ENST00000533246 PNPOQ9NVS9 261 aa12.41□□□□□ -0.42
BDNF-218ENST00000533246 TRPM5Q9NZQ8 1165 aa12.41□□□□□ -0.42
BDNF-218ENST00000533246 MARCH2Q9P0N8 246 aa12.41□□□□□ -0.42
BDNF-218ENST00000533246 SCHIP1Q9P0W5 487 aaPredicted RBP12.41□□□□□ -0.42
BDNF-218ENST00000533246 COQ4Q9Y3A0 265 aa12.41□□□□□ -0.42
BDNF-218ENST00000533246 CCL22O00626 93 aa12.41□□□□□ -0.42
BDNF-218ENST00000533246 CBFA2T3O75081 653 aa12.41□□□□□ -0.42
BDNF-218ENST00000533246 ALDH1A1P00352 501 aa12.41□□□□□ -0.42
BDNF-218ENST00000533246 YWHAQP27348 245 aa12.41□□□□□ -0.42
BDNF-218ENST00000533246 CD86P42081 329 aa12.41□□□□□ -0.42
BDNF-218ENST00000533246 GAD2Q05329 585 aa12.41□□□□□ -0.42
BDNF-218ENST00000533246 SLC34A1Q06495 639 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms