RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 POLD3Q15054 466 aaPredicted RBP20.89■□□□□ 0.94
CCS-208ENST00000533244 KCNT1Q5JUK3 1230 aa20.89■□□□□ 0.94
CCS-208ENST00000533244 LYSMD4Q5XG99 296 aa20.89■□□□□ 0.94
CCS-208ENST00000533244 TXNRD3NBQ6F5E7 133 aa20.89■□□□□ 0.94
CCS-208ENST00000533244 C22orf39Q6P5X5 142 aa20.89■□□□□ 0.94
CCS-208ENST00000533244 RFX8Q6ZV50 586 aa20.89■□□□□ 0.94
CCS-208ENST00000533244 CYP2U1Q7Z449 544 aa20.89■□□□□ 0.94
CCS-208ENST00000533244 KIAA2013Q8IYS2 634 aa20.89■□□□□ 0.94
CCS-208ENST00000533244 CADM4Q8NFZ8 388 aa20.89■□□□□ 0.94
CCS-208ENST00000533244 CEP44Q9C0F1 390 aa20.89■□□□□ 0.94
CCS-208ENST00000533244 OSGEPQ9NPF4 335 aa20.89■□□□□ 0.94
CCS-208ENST00000533244 VPS45Q9NRW7 570 aa20.89■□□□□ 0.94
CCS-208ENST00000533244 INTUQ9ULD6 942 aa20.89■□□□□ 0.94
CCS-208ENST00000533244 MID1O15344 667 aa20.88■□□□□ 0.93
CCS-208ENST00000533244 NDUFS2O75306 463 aa20.88■□□□□ 0.93
CCS-208ENST00000533244 MTA2O94776 668 aa20.88■□□□□ 0.93
CCS-208ENST00000533244 LCA5LO95447 670 aa20.88■□□□□ 0.93
CCS-208ENST00000533244 ADH1BP00325 375 aa20.88■□□□□ 0.93
CCS-208ENST00000533244 RARAP10276 462 aa20.88■□□□□ 0.93
CCS-208ENST00000533244 GOT1P17174 413 aa20.88■□□□□ 0.93
CCS-208ENST00000533244 DPYSQ14117 519 aa20.88■□□□□ 0.93
CCS-208ENST00000533244 NUMA1Q14980 2115 aa20.88■□□□□ 0.93
CCS-208ENST00000533244 TCEAL1Q15170 157 aa20.88■□□□□ 0.93
CCS-208ENST00000533244 SMTNL2Q2TAL5 461 aa20.88■□□□□ 0.93
CCS-208ENST00000533244 PARP15Q460N3 678 aa20.88■□□□□ 0.93
CCS-208ENST00000533244 PRR23CQ6ZRP0 262 aa20.88■□□□□ 0.93
CCS-208ENST00000533244 ARMCX6Q7L4S7 300 aa20.88■□□□□ 0.93
CCS-208ENST00000533244 OR2A12Q8NGT7 310 aa20.88■□□□□ 0.93
CCS-208ENST00000533244 OR8D1Q8WZ84 308 aa20.88■□□□□ 0.93
CCS-208ENST00000533244 FAM131CQ96AQ9 280 aa20.88■□□□□ 0.93
CCS-208ENST00000533244 KLC2Q9H0B6 622 aa20.88■□□□□ 0.93
CCS-208ENST00000533244 PCED1AQ9H1Q7 454 aa20.88■□□□□ 0.93
CCS-208ENST00000533244 LRRC19Q9H756 370 aa20.88■□□□□ 0.93
CCS-208ENST00000533244 DONSONQ9NYP3 566 aa20.88■□□□□ 0.93
CCS-208ENST00000533244 CWC15Q9P013 229 aaKnown RBP20.88■□□□□ 0.93
CCS-208ENST00000533244 SERGEFQ9UGK8 458 aa20.88■□□□□ 0.93
CCS-208ENST00000533244 CEP250Q9BV73 2442 aa20.88■□□□□ 0.93
CCS-208ENST00000533244 DMXL1Q9Y485 3027 aa20.88■□□□□ 0.93
CCS-208ENST00000533244 GON4LQ3T8J9 2241 aa20.88■□□□□ 0.93
CCS-208ENST00000533244 KDELR3O43731 214 aa20.87■□□□□ 0.93
CCS-208ENST00000533244 FOXD2O60548 495 aaPredicted RBP20.87■□□□□ 0.93
CCS-208ENST00000533244 C5AR1P21730 350 aa20.87■□□□□ 0.93
CCS-208ENST00000533244 SLC8A1P32418 973 aa20.87■□□□□ 0.93
CCS-208ENST00000533244 ACSL1P33121 698 aa20.87■□□□□ 0.93
CCS-208ENST00000533244 MAN1A1P33908 653 aa20.87■□□□□ 0.93
CCS-208ENST00000533244 HOXD12P35452 270 aa20.87■□□□□ 0.93
CCS-208ENST00000533244 DPP6P42658 865 aa20.87■□□□□ 0.93
CCS-208ENST00000533244 PSMD8P48556 350 aa20.87■□□□□ 0.93
CCS-208ENST00000533244 NDST2P52849 883 aa20.87■□□□□ 0.93
CCS-208ENST00000533244 CCDC6Q16204 474 aa20.87■□□□□ 0.93
CCS-208ENST00000533244 PPP6R3Q5H9R7 873 aaPredicted RBP20.87■□□□□ 0.93
CCS-208ENST00000533244 DSG4Q86SJ6 1040 aa20.87■□□□□ 0.93
CCS-208ENST00000533244 CPNE8Q86YQ8 564 aa20.87■□□□□ 0.93
CCS-208ENST00000533244 CCDC170Q8IYT3 715 aa20.87■□□□□ 0.93
CCS-208ENST00000533244 AADATQ8N5Z0 425 aa20.87■□□□□ 0.93
CCS-208ENST00000533244 DEFB119Q8N690 84 aa20.87■□□□□ 0.93
CCS-208ENST00000533244 FOXJ1Q92949 421 aa20.87■□□□□ 0.93
CCS-208ENST00000533244 HMCESQ96FZ2 354 aa20.87■□□□□ 0.93
CCS-208ENST00000533244 HSPA12BQ96MM6 686 aa20.87■□□□□ 0.93
CCS-208ENST00000533244 GPR174Q9BXC1 333 aa20.87■□□□□ 0.93
CCS-208ENST00000533244 ZWILCHQ9H900 591 aa20.87■□□□□ 0.93
CCS-208ENST00000533244 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.87■□□□□ 0.93
CCS-208ENST00000533244 PILRBQ9UKJ0 227 aa20.87■□□□□ 0.93
CCS-208ENST00000533244 PPM1HQ9ULR3 514 aa20.87■□□□□ 0.93
CCS-208ENST00000533244 FZD4Q9ULV1 537 aa20.87■□□□□ 0.93
CCS-208ENST00000533244 ACTL7AQ9Y615 435 aa20.87■□□□□ 0.93
CCS-208ENST00000533244 ZSCAN5CA6NGD5 496 aaPredicted RBP20.87■□□□□ 0.93
CCS-208ENST00000533244 C10orf142B7Z368 130 aa20.87■□□□□ 0.93
CCS-208ENST00000533244 RASA4BC9J798 803 aa20.87■□□□□ 0.93
CCS-208ENST00000533244 RASA4O43374 803 aa20.87■□□□□ 0.93
CCS-208ENST00000533244 ERCC2P18074 760 aa20.87■□□□□ 0.93
CCS-208ENST00000533244 ITPKAP23677 461 aa20.87■□□□□ 0.93
CCS-208ENST00000533244 CDC25BP30305 580 aa20.87■□□□□ 0.93
CCS-208ENST00000533244 GEMIN4P57678 1058 aaKnown RBP20.87■□□□□ 0.93
CCS-208ENST00000533244 SFSWAPQ12872 951 aaKnown RBP20.87■□□□□ 0.93
CCS-208ENST00000533244 SERINC3Q13530 473 aa20.87■□□□□ 0.93
CCS-208ENST00000533244 AFMIDQ63HM1 303 aa20.87■□□□□ 0.93
CCS-208ENST00000533244 POLNQ7Z5Q5 900 aa20.87■□□□□ 0.93
CCS-208ENST00000533244 FAM124AQ86V42 546 aa20.87■□□□□ 0.93
CCS-208ENST00000533244 SYT12Q8IV01 421 aa20.87■□□□□ 0.93
CCS-208ENST00000533244 RHOT2Q8IXI1 618 aa20.87■□□□□ 0.93
CCS-208ENST00000533244 PCDH20Q8N6Y1 951 aaKnown RBP20.87■□□□□ 0.93
CCS-208ENST00000533244 SLC35G2Q8TBE7 412 aa20.87■□□□□ 0.93
CCS-208ENST00000533244 FAM71BQ8TC56 605 aa20.87■□□□□ 0.93
CCS-208ENST00000533244 RFFLQ8WZ73 363 aa20.87■□□□□ 0.93
CCS-208ENST00000533244 TSC1Q92574 1164 aa20.87■□□□□ 0.93
CCS-208ENST00000533244 ISG20Q96AZ6 181 aaKnown RBP20.87■□□□□ 0.93
CCS-208ENST00000533244 CCDC114Q96M63 670 aa20.87■□□□□ 0.93
CCS-208ENST00000533244 BTBD1Q9H0C5 482 aa20.87■□□□□ 0.93
CCS-208ENST00000533244 SGK2Q9HBY8 427 aa20.87■□□□□ 0.93
CCS-208ENST00000533244 TMEM74BQ9NUR3 256 aa20.87■□□□□ 0.93
CCS-208ENST00000533244 FBXL12Q9NXK8 326 aa20.87■□□□□ 0.93
CCS-208ENST00000533244 SARDHQ9UL12 918 aa20.87■□□□□ 0.93
CCS-208ENST00000533244 HPCAL4Q9UM19 191 aa20.87■□□□□ 0.93
CCS-208ENST00000533244 IL1BP01584 269 aa20.86■□□□□ 0.93
CCS-208ENST00000533244 CTSLP07711 333 aa20.86■□□□□ 0.93
CCS-208ENST00000533244 DRD3P35462 400 aa20.86■□□□□ 0.93
CCS-208ENST00000533244 LMNB2Q03252 620 aa20.86■□□□□ 0.93
CCS-208ENST00000533244 SF3A2Q15428 464 aaKnown RBP20.86■□□□□ 0.93
CCS-208ENST00000533244 ARHGAP12Q8IWW6 846 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms