RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 A0A1W2PQJ5 194 aa30.98■■■□□ 2.55
SSSCA1-207ENST00000533115 DDX3XO00571 662 aaKnown RBP eCLIP30.98■■■□□ 2.55
SSSCA1-207ENST00000533115 ZMPSTE24O75844 475 aa30.98■■■□□ 2.55
SSSCA1-207ENST00000533115 SKILP12757 684 aa30.98■■■□□ 2.55
SSSCA1-207ENST00000533115 DESP17661 470 aa30.98■■■□□ 2.55
SSSCA1-207ENST00000533115 AFF3P51826 1226 aaKnown RBP30.98■■■□□ 2.55
SSSCA1-207ENST00000533115 METAP1P53582 386 aa30.98■■■□□ 2.55
SSSCA1-207ENST00000533115 OGDHQ02218 1023 aa30.98■■■□□ 2.55
SSSCA1-207ENST00000533115 SEMA3BQ13214 749 aa30.98■■■□□ 2.55
SSSCA1-207ENST00000533115 EFHC2Q5JST6 749 aa30.98■■■□□ 2.55
SSSCA1-207ENST00000533115 N4BP2L1Q5TBK1 243 aaPredicted RBP30.98■■■□□ 2.55
SSSCA1-207ENST00000533115 PLEKHA7Q6IQ23 1121 aa30.98■■■□□ 2.55
SSSCA1-207ENST00000533115 RETSATQ6NUM9 610 aa30.98■■■□□ 2.55
SSSCA1-207ENST00000533115 DNAAF5Q86Y56 855 aa30.98■■■□□ 2.55
SSSCA1-207ENST00000533115 OR14C36Q8NHC7 312 aa30.98■■■□□ 2.55
SSSCA1-207ENST00000533115 PIP4K2CQ8TBX8 421 aa30.98■■■□□ 2.55
SSSCA1-207ENST00000533115 CCDC114Q96M63 670 aa30.98■■■□□ 2.55
SSSCA1-207ENST00000533115 TM9SF3Q9HD45 589 aa30.98■■■□□ 2.55
SSSCA1-207ENST00000533115 FARP1Q9Y4F1 1045 aaPredicted RBP30.98■■■□□ 2.55
SSSCA1-207ENST00000533115 UPK3BL1B0FP48 263 aa30.97■■■□□ 2.55
SSSCA1-207ENST00000533115 UPK3BL2E5RIL1 263 aa30.97■■■□□ 2.55
SSSCA1-207ENST00000533115 C1QTNF3-AMACRE9PGA6 284 aa30.97■■■□□ 2.55
SSSCA1-207ENST00000533115 FTLP02792 175 aaPredicted RBP30.97■■■□□ 2.55
SSSCA1-207ENST00000533115 ADPRHP54922 357 aa30.97■■■□□ 2.55
SSSCA1-207ENST00000533115 SLC20A2Q08357 652 aa30.97■■■□□ 2.55
SSSCA1-207ENST00000533115 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP30.97■■■□□ 2.55
SSSCA1-207ENST00000533115 PYROXD2Q8N2H3 581 aa30.97■■■□□ 2.55
SSSCA1-207ENST00000533115 OR2A12Q8NGT7 310 aa30.97■■■□□ 2.55
SSSCA1-207ENST00000533115 FAM131CQ96AQ9 280 aa30.97■■■□□ 2.55
SSSCA1-207ENST00000533115 ORAI3Q9BRQ5 295 aa30.97■■■□□ 2.55
SSSCA1-207ENST00000533115 DNAI1Q9UI46 699 aa30.97■■■□□ 2.55
SSSCA1-207ENST00000533115 FZD10Q9ULW2 581 aa30.97■■■□□ 2.55
SSSCA1-207ENST00000533115 GIPC1O14908 333 aa30.96■■■□□ 2.55
SSSCA1-207ENST00000533115 ATMINO43313 823 aaPredicted RBP30.96■■■□□ 2.55
SSSCA1-207ENST00000533115 RTN2O75298 545 aa30.96■■■□□ 2.55
SSSCA1-207ENST00000533115 GJB3O75712 270 aa30.96■■■□□ 2.55
SSSCA1-207ENST00000533115 CEACAM1P13688 526 aa30.96■■■□□ 2.55
SSSCA1-207ENST00000533115 L1CAMP32004 1257 aa30.96■■■□□ 2.55
SSSCA1-207ENST00000533115 ETFBP38117 255 aa30.96■■■□□ 2.55
SSSCA1-207ENST00000533115 CSNK1EP49674 416 aaKnown RBP30.96■■■□□ 2.55
SSSCA1-207ENST00000533115 AIF1P55008 147 aa30.96■■■□□ 2.55
SSSCA1-207ENST00000533115 BNC1Q01954 994 aa30.96■■■□□ 2.55
SSSCA1-207ENST00000533115 C22orf39Q6P5X5 142 aa30.96■■■□□ 2.55
SSSCA1-207ENST00000533115 TMC6Q7Z403 805 aa30.96■■■□□ 2.55
SSSCA1-207ENST00000533115 DEFB124Q8NES8 71 aa30.96■■■□□ 2.55
SSSCA1-207ENST00000533115 ACE2Q9BYF1 805 aaPredicted RBP30.96■■■□□ 2.55
SSSCA1-207ENST00000533115 A0A1B0GVT2 93 aa30.95■■■□□ 2.55
SSSCA1-207ENST00000533115 C10orf142B7Z368 130 aa30.95■■■□□ 2.55
SSSCA1-207ENST00000533115 PLK4O00444 970 aa30.95■■■□□ 2.55
SSSCA1-207ENST00000533115 SERPINH1P50454 418 aaKnown RBP30.95■■■□□ 2.55
SSSCA1-207ENST00000533115 ARF5P84085 180 aa30.95■■■□□ 2.55
SSSCA1-207ENST00000533115 TEAD4Q15561 434 aa30.95■■■□□ 2.55
SSSCA1-207ENST00000533115 IL27RAQ6UWB1 636 aa30.95■■■□□ 2.55
SSSCA1-207ENST00000533115 PIP4P1Q86T03 277 aa30.95■■■□□ 2.55
SSSCA1-207ENST00000533115 SYN2Q92777 582 aaPredicted RBP30.95■■■□□ 2.55
SSSCA1-207ENST00000533115 ARHGEF2Q92974 986 aaKnown RBP30.95■■■□□ 2.55
SSSCA1-207ENST00000533115 IQCDQ96DY2 449 aa30.95■■■□□ 2.55
SSSCA1-207ENST00000533115 SLC32A1Q9H598 525 aa30.95■■■□□ 2.55
SSSCA1-207ENST00000533115 IFNKQ9P0W0 207 aa30.95■■■□□ 2.55
SSSCA1-207ENST00000533115 A0A1W2PPC4 97 aa30.94■■■□□ 2.54
SSSCA1-207ENST00000533115 SLC7A4O43246 635 aa30.94■■■□□ 2.54
SSSCA1-207ENST00000533115 CTSLP07711 333 aa30.94■■■□□ 2.54
SSSCA1-207ENST00000533115 CHRNA3P32297 505 aa30.94■■■□□ 2.54
SSSCA1-207ENST00000533115 ACVRL1P37023 503 aa30.94■■■□□ 2.54
SSSCA1-207ENST00000533115 CCR5P51681 352 aa30.94■■■□□ 2.54
SSSCA1-207ENST00000533115 SLC14A1Q13336 389 aa30.94■■■□□ 2.54
SSSCA1-207ENST00000533115 POM121L1PQ3SYA9 428 aa30.94■■■□□ 2.54
SSSCA1-207ENST00000533115 CEP44Q9C0F1 390 aa30.94■■■□□ 2.54
SSSCA1-207ENST00000533115 MAGEH1Q9H213 219 aa30.94■■■□□ 2.54
SSSCA1-207ENST00000533115 TNKS2Q9H2K2 1166 aa30.94■■■□□ 2.54
SSSCA1-207ENST00000533115 CNOT8Q9UFF9 292 aaKnown RBP30.94■■■□□ 2.54
SSSCA1-207ENST00000533115 BZW2Q9Y6E2 419 aaKnown RBP30.94■■■□□ 2.54
SSSCA1-207ENST00000533115 TBC1D3DA0A087WVF3 549 aa30.93■■■□□ 2.54
SSSCA1-207ENST00000533115 TBC1D3IA0A087WXS9 549 aa30.93■■■□□ 2.54
SSSCA1-207ENST00000533115 TBC1D3EA0A087X179 549 aa30.93■■■□□ 2.54
SSSCA1-207ENST00000533115 TBC1D3KA0A087X1G2 549 aa30.93■■■□□ 2.54
SSSCA1-207ENST00000533115 CXorf51AA0A1B0GTR3 108 aa30.93■■■□□ 2.54
SSSCA1-207ENST00000533115 TBC1D3FA6NER0 549 aaPredicted RBP30.93■■■□□ 2.54
SSSCA1-207ENST00000533115 TMEM191CA6NGB0 347 aa30.93■■■□□ 2.54
SSSCA1-207ENST00000533115 TBC1D3LB9A6J9 549 aa30.93■■■□□ 2.54
SSSCA1-207ENST00000533115 TBC1D3HP0C7X1 549 aa30.93■■■□□ 2.54
SSSCA1-207ENST00000533115 CD59P13987 128 aa30.93■■■□□ 2.54
SSSCA1-207ENST00000533115 PSMA2P25787 234 aa30.93■■■□□ 2.54
SSSCA1-207ENST00000533115 GRIA4P48058 902 aa30.93■■■□□ 2.54
SSSCA1-207ENST00000533115 ZBED6P86452 979 aa30.93■■■□□ 2.54
SSSCA1-207ENST00000533115 CNTN1Q12860 1018 aa30.93■■■□□ 2.54
SSSCA1-207ENST00000533115 TDRD12Q587J7 1177 aaKnown RBP30.93■■■□□ 2.54
SSSCA1-207ENST00000533115 HGSNATQ68CP4 663 aa30.93■■■□□ 2.54
SSSCA1-207ENST00000533115 TBC1D3GQ6DHY5 549 aa30.93■■■□□ 2.54
SSSCA1-207ENST00000533115 TBC1D3CQ6IPX1 549 aa30.93■■■□□ 2.54
SSSCA1-207ENST00000533115 TBC1D3Q8IZP1 549 aaPredicted RBP30.93■■■□□ 2.54
SSSCA1-207ENST00000533115 TMIEQ8NEW7 156 aa30.93■■■□□ 2.54
SSSCA1-207ENST00000533115 KDM4CQ9H3R0 1056 aa30.93■■■□□ 2.54
SSSCA1-207ENST00000533115 GAREM1Q9H706 876 aa30.93■■■□□ 2.54
SSSCA1-207ENST00000533115 EBF2Q9HAK2 575 aa30.93■■■□□ 2.54
SSSCA1-207ENST00000533115 TPX2Q9ULW0 747 aaKnown RBP30.93■■■□□ 2.54
SSSCA1-207ENST00000533115 CAPN11Q9UMQ6 739 aa30.93■■■□□ 2.54
SSSCA1-207ENST00000533115 CHD5Q8TDI0 1954 aa30.92■■■□□ 2.54
SSSCA1-207ENST00000533115 PLRG1O43660 514 aaKnown RBP30.92■■■□□ 2.54
SSSCA1-207ENST00000533115 RAMP2O60895 175 aa30.92■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms