RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 DNALI1O14645 258 aaPredicted RBP11.47□□□□□ -0.57
PTPRK-221ENST00000532331 NRP1O14786 923 aa11.47□□□□□ -0.57
PTPRK-221ENST00000532331 CCNT2O60583 730 aaKnown RBP11.47□□□□□ -0.57
PTPRK-221ENST00000532331 RNASEH2AO75792 299 aaKnown RBP11.47□□□□□ -0.57
PTPRK-221ENST00000532331 APOA1P02647 267 aa11.47□□□□□ -0.57
PTPRK-221ENST00000532331 ITIH4Q14624 930 aa11.47□□□□□ -0.57
PTPRK-221ENST00000532331 RRP1BQ14684 758 aaKnown RBP11.47□□□□□ -0.57
PTPRK-221ENST00000532331 BMT2Q1RMZ1 405 aa11.47□□□□□ -0.57
PTPRK-221ENST00000532331 TADA1Q96BN2 335 aa11.47□□□□□ -0.57
PTPRK-221ENST00000532331 VPS50Q96JG6 964 aa11.47□□□□□ -0.57
PTPRK-221ENST00000532331 SLC9A7Q96T83 725 aa11.47□□□□□ -0.57
PTPRK-221ENST00000532331 ZMYM5Q9UJ78 669 aa11.47□□□□□ -0.57
PTPRK-221ENST00000532331 ASB3Q9Y575 518 aa11.47□□□□□ -0.57
PTPRK-221ENST00000532331 ELFN1P0C7U0 828 aa11.46□□□□□ -0.57
PTPRK-221ENST00000532331 CES1P23141 567 aa11.46□□□□□ -0.57
PTPRK-221ENST00000532331 CHI3L1P36222 383 aaPredicted RBP11.46□□□□□ -0.57
PTPRK-221ENST00000532331 GRTP1Q5TC63 336 aa11.46□□□□□ -0.57
PTPRK-221ENST00000532331 C12orf56Q8IXR9 622 aa11.46□□□□□ -0.57
PTPRK-221ENST00000532331 LEMD2Q8NC56 503 aa11.46□□□□□ -0.57
PTPRK-221ENST00000532331 AGO1Q9UL18 857 aaKnown RBP11.46□□□□□ -0.57
PTPRK-221ENST00000532331 NAALADL1Q9UQQ1 740 aa11.46□□□□□ -0.57
PTPRK-221ENST00000532331 CALCAP01258 141 aa11.46□□□□□ -0.57
PTPRK-221ENST00000532331 ERBB2P04626 1255 aa11.46□□□□□ -0.57
PTPRK-221ENST00000532331 PGAM1P18669 254 aa11.46□□□□□ -0.57
PTPRK-221ENST00000532331 CCNG1P51959 295 aa11.46□□□□□ -0.57
PTPRK-221ENST00000532331 PLOD1Q02809 727 aaPredicted RBP11.46□□□□□ -0.57
PTPRK-221ENST00000532331 CYP2A13Q16696 494 aa11.46□□□□□ -0.57
PTPRK-221ENST00000532331 MFSD7Q6UXD7 560 aa11.46□□□□□ -0.57
PTPRK-221ENST00000532331 PLD3Q8IV08 490 aa11.46□□□□□ -0.57
PTPRK-221ENST00000532331 DIS3LQ8TF46 1054 aaKnown RBP11.46□□□□□ -0.57
PTPRK-221ENST00000532331 FCRL2Q96LA5 508 aaPredicted RBP11.46□□□□□ -0.57
PTPRK-221ENST00000532331 ASB8Q9H765 288 aa11.46□□□□□ -0.57
PTPRK-221ENST00000532331 MAGEC1O60732 1142 aa11.46□□□□□ -0.58
PTPRK-221ENST00000532331 TARSP26639 723 aaKnown RBP11.46□□□□□ -0.58
PTPRK-221ENST00000532331 NRIP1P48552 1158 aa11.46□□□□□ -0.58
PTPRK-221ENST00000532331 SPANXN3Q5MJ09 141 aa11.46□□□□□ -0.58
PTPRK-221ENST00000532331 SH3RF1Q7Z6J0 888 aa11.46□□□□□ -0.58
PTPRK-221ENST00000532331 C12orf50Q8NA57 414 aaPredicted RBP11.46□□□□□ -0.58
PTPRK-221ENST00000532331 TRIB2Q92519 343 aa11.46□□□□□ -0.58
PTPRK-221ENST00000532331 ELMO1Q92556 727 aa11.46□□□□□ -0.58
PTPRK-221ENST00000532331 CAVIN3Q969G5 261 aa11.46□□□□□ -0.58
PTPRK-221ENST00000532331 LRRC72A6NJI9 287 aa11.46□□□□□ -0.58
PTPRK-221ENST00000532331 ERI2A8K979 691 aaKnown RBP11.46□□□□□ -0.58
PTPRK-221ENST00000532331 KDELR1P24390 212 aa11.46□□□□□ -0.58
PTPRK-221ENST00000532331 ABL2P42684 1182 aa11.46□□□□□ -0.58
PTPRK-221ENST00000532331 CYP51A1Q16850 503 aa11.46□□□□□ -0.58
PTPRK-221ENST00000532331 CAPRIN2Q6IMN6 1127 aaKnown RBP11.46□□□□□ -0.58
PTPRK-221ENST00000532331 ADCK1Q86TW2 530 aa11.46□□□□□ -0.58
PTPRK-221ENST00000532331 C10orf53Q8N6V4 93 aa11.46□□□□□ -0.58
PTPRK-221ENST00000532331 ARL14EPQ8N8R7 260 aaPredicted RBP11.46□□□□□ -0.58
PTPRK-221ENST00000532331 DNAJC9Q8WXX5 260 aa11.46□□□□□ -0.58
PTPRK-221ENST00000532331 THAP11Q96EK4 314 aa11.46□□□□□ -0.58
PTPRK-221ENST00000532331 CATP04040 527 aaKnown RBP11.45□□□□□ -0.58
PTPRK-221ENST00000532331 PYGMP11217 842 aa11.45□□□□□ -0.58
PTPRK-221ENST00000532331 COL6A1P12109 1028 aa11.45□□□□□ -0.58
PTPRK-221ENST00000532331 KLC1Q07866 573 aa11.45□□□□□ -0.58
PTPRK-221ENST00000532331 KCNMB4Q86W47 210 aa11.45□□□□□ -0.58
PTPRK-221ENST00000532331 FAM228AQ86W67 206 aa11.45□□□□□ -0.58
PTPRK-221ENST00000532331 CFAP52Q8N1V2 620 aa11.45□□□□□ -0.58
PTPRK-221ENST00000532331 REPS1Q96D71 796 aa11.45□□□□□ -0.58
PTPRK-221ENST00000532331 SNRNP25Q9BV90 132 aaKnown RBP11.45□□□□□ -0.58
PTPRK-221ENST00000532331 FUT8Q9BYC5 575 aa11.45□□□□□ -0.58
PTPRK-221ENST00000532331 GULP1Q9UBP9 304 aa11.45□□□□□ -0.58
PTPRK-221ENST00000532331 DMGDHQ9UI17 866 aaKnown RBP11.45□□□□□ -0.58
PTPRK-221ENST00000532331 LRRC37A3O60309 1634 aa11.45□□□□□ -0.58
PTPRK-221ENST00000532331 SLC38A8A6NNN8 435 aa11.45□□□□□ -0.58
PTPRK-221ENST00000532331 APOC4-APOC2K7ER74 178 aa11.45□□□□□ -0.58
PTPRK-221ENST00000532331 QSOX1O00391 747 aa11.45□□□□□ -0.58
PTPRK-221ENST00000532331 APOC2P02655 101 aa11.45□□□□□ -0.58
PTPRK-221ENST00000532331 ALBP02768 609 aa11.45□□□□□ -0.58
PTPRK-221ENST00000532331 CCNB1P14635 433 aa11.45□□□□□ -0.58
PTPRK-221ENST00000532331 TFE3P19532 575 aaPredicted RBP11.45□□□□□ -0.58
PTPRK-221ENST00000532331 GP5P40197 560 aa11.45□□□□□ -0.58
PTPRK-221ENST00000532331 ELK3P41970 407 aa11.45□□□□□ -0.58
PTPRK-221ENST00000532331 MAMLD1Q13495 774 aa11.45□□□□□ -0.58
PTPRK-221ENST00000532331 BMPR2Q13873 1038 aa11.45□□□□□ -0.58
PTPRK-221ENST00000532331 CYLC2Q14093 348 aaPredicted RBP11.45□□□□□ -0.58
PTPRK-221ENST00000532331 ARSHQ5FYA8 562 aa11.45□□□□□ -0.58
PTPRK-221ENST00000532331 PPP1R15BQ5SWA1 713 aa11.45□□□□□ -0.58
PTPRK-221ENST00000532331 LDLRAD1Q5T700 205 aa11.45□□□□□ -0.58
PTPRK-221ENST00000532331 FBXW10Q5XX13 1052 aa11.45□□□□□ -0.58
PTPRK-221ENST00000532331 PDPK2PQ6A1A2 396 aa11.45□□□□□ -0.58
PTPRK-221ENST00000532331 OR14C36Q8NHC7 312 aa11.45□□□□□ -0.58
PTPRK-221ENST00000532331 INPP5DQ92835 1189 aa11.45□□□□□ -0.58
PTPRK-221ENST00000532331 SEMA3CQ99985 751 aa11.45□□□□□ -0.58
PTPRK-221ENST00000532331 MIEF1Q9NQG6 463 aa11.45□□□□□ -0.58
PTPRK-221ENST00000532331 CATSPERZQ9NTU4 200 aa11.45□□□□□ -0.58
PTPRK-221ENST00000532331 C1orf232A0A0U1RR37 186 aa11.45□□□□□ -0.58
PTPRK-221ENST00000532331 PAGE1O75459 146 aa11.45□□□□□ -0.58
PTPRK-221ENST00000532331 VAPBO95292 243 aa11.45□□□□□ -0.58
PTPRK-221ENST00000532331 MGAT1P26572 445 aa11.45□□□□□ -0.58
PTPRK-221ENST00000532331 BLVRAP53004 296 aa11.45□□□□□ -0.58
PTPRK-221ENST00000532331 AQP5P55064 265 aa11.45□□□□□ -0.58
PTPRK-221ENST00000532331 LILRA4P59901 499 aa11.45□□□□□ -0.58
PTPRK-221ENST00000532331 PARP6Q2NL67 630 aa11.45□□□□□ -0.58
PTPRK-221ENST00000532331 ZNF470Q6ECI4 717 aa11.45□□□□□ -0.58
PTPRK-221ENST00000532331 PRR23BQ6ZRT6 265 aa11.45□□□□□ -0.58
PTPRK-221ENST00000532331 FAM71AQ8IYT1 594 aa11.45□□□□□ -0.58
PTPRK-221ENST00000532331 HERVK_113Q902F9 699 aa11.45□□□□□ -0.58
PTPRK-221ENST00000532331 BADQ92934 168 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms