RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, humanhuman

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-222ENST00000531551 KCTD19Q17RG1 926 aaPredicted RBP18■□□□□ 0.47
CTSB-222ENST00000531551 CCDC137Q6PK04 289 aaKnown RBP18■□□□□ 0.47
CTSB-222ENST00000531551 ZNF852Q6ZMS4 543 aa18■□□□□ 0.47
CTSB-222ENST00000531551 GSTA5Q7RTV2 222 aa18■□□□□ 0.47
CTSB-222ENST00000531551 SUGP1Q8IWZ8 645 aaKnown RBP18■□□□□ 0.47
CTSB-222ENST00000531551 SIX5Q8N196 739 aa18■□□□□ 0.47
CTSB-222ENST00000531551 UCMAQ8WVF2 138 aa18■□□□□ 0.47
CTSB-222ENST00000531551 TTC17Q96AE7 1141 aa18■□□□□ 0.47
CTSB-222ENST00000531551 TSGA13Q96PP4 275 aa18■□□□□ 0.47
CTSB-222ENST00000531551 TTLL3Q9Y4R7 772 aa18■□□□□ 0.47
CTSB-222ENST00000531551 KRBA1A5PL33 1030 aa17.99■□□□□ 0.47
CTSB-222ENST00000531551 ANTXRLA6NF34 631 aa17.99■□□□□ 0.47
CTSB-222ENST00000531551 ZSCAN5CA6NGD5 496 aaPredicted RBP17.99■□□□□ 0.47
CTSB-222ENST00000531551 K7ERQ8 282 aa17.99■□□□□ 0.47
CTSB-222ENST00000531551 SGK1O00141 431 aa17.99■□□□□ 0.47
CTSB-222ENST00000531551 MATN3O15232 486 aa17.99■□□□□ 0.47
CTSB-222ENST00000531551 DLDP09622 509 aaKnown RBP17.99■□□□□ 0.47
CTSB-222ENST00000531551 DRD1P21728 446 aa17.99■□□□□ 0.47
CTSB-222ENST00000531551 COILP38432 576 aaPredicted RBP17.99■□□□□ 0.47
CTSB-222ENST00000531551 CLCN6P51797 869 aa17.99■□□□□ 0.47
CTSB-222ENST00000531551 PRKCQQ04759 706 aa17.99■□□□□ 0.47
CTSB-222ENST00000531551 EIF4HQ15056 248 aaKnown RBP17.99■□□□□ 0.47
CTSB-222ENST00000531551 OASLQ15646 514 aaKnown RBP17.99■□□□□ 0.47
CTSB-222ENST00000531551 ACCSLQ4AC99 568 aa17.99■□□□□ 0.47
CTSB-222ENST00000531551 TMEM196Q5HYL7 178 aa17.99■□□□□ 0.47
CTSB-222ENST00000531551 EMC10Q5UCC4 262 aa17.99■□□□□ 0.47
CTSB-222ENST00000531551 FSTL4Q6MZW2 842 aa17.99■□□□□ 0.47
CTSB-222ENST00000531551 TTC27Q6P3X3 843 aa17.99■□□□□ 0.47
CTSB-222ENST00000531551 FAM71DQ8N9W8 422 aa17.99■□□□□ 0.47
CTSB-222ENST00000531551 NKD2Q969F2 451 aaPredicted RBP17.99■□□□□ 0.47
CTSB-222ENST00000531551 CARD6Q9BX69 1037 aa17.99■□□□□ 0.47
CTSB-222ENST00000531551 PDFQ9HBH1 243 aa17.99■□□□□ 0.47
CTSB-222ENST00000531551 ERVW-1Q9UQF0 538 aa17.99■□□□□ 0.47
CTSB-222ENST00000531551 BCLAF3A2AJT9 711 aaKnown RBP17.99■□□□□ 0.47
CTSB-222ENST00000531551 CCDC188H7C350 402 aa17.99■□□□□ 0.47
CTSB-222ENST00000531551 STK25O00506 426 aa17.99■□□□□ 0.47
CTSB-222ENST00000531551 TIMM44O43615 452 aa17.99■□□□□ 0.47
CTSB-222ENST00000531551 IFNB1P01574 187 aa17.99■□□□□ 0.47
CTSB-222ENST00000531551 JCHAINP01591 159 aa17.99■□□□□ 0.47
CTSB-222ENST00000531551 ASLP04424 464 aa17.99■□□□□ 0.47
CTSB-222ENST00000531551 CCNB1P14635 433 aa17.99■□□□□ 0.47
CTSB-222ENST00000531551 NNMTP40261 264 aa17.99■□□□□ 0.47
CTSB-222ENST00000531551 NRLP54845 237 aa17.99■□□□□ 0.47
CTSB-222ENST00000531551 ST8SIA6P61647 398 aa17.99■□□□□ 0.47
CTSB-222ENST00000531551 SLC10A7Q0GE19 358 aa17.99■□□□□ 0.47
CTSB-222ENST00000531551 LBRQ14739 615 aaKnown RBP17.99■□□□□ 0.47
CTSB-222ENST00000531551 CYP1B1Q16678 543 aa17.99■□□□□ 0.47
CTSB-222ENST00000531551 MARC1Q5VT66 337 aa17.99■□□□□ 0.47
CTSB-222ENST00000531551 C12orf50Q8NA57 414 aaPredicted RBP17.99■□□□□ 0.47
CTSB-222ENST00000531551 MNS1Q8NEH6 495 aa17.99■□□□□ 0.47
CTSB-222ENST00000531551 KRT12Q99456 494 aa17.99■□□□□ 0.47
CTSB-222ENST00000531551 SLCO3A1Q9UIG8 710 aa17.99■□□□□ 0.47
CTSB-222ENST00000531551 FCF1Q9Y324 198 aaKnown RBP17.99■□□□□ 0.47
CTSB-222ENST00000531551 CTAGE15A4D2H0 777 aa17.98■□□□□ 0.47
CTSB-222ENST00000531551 K7EQS6 105 aa17.98■□□□□ 0.47
CTSB-222ENST00000531551 CTAGE8P0CG41 777 aa17.98■□□□□ 0.47
CTSB-222ENST00000531551 CHRNA3P32297 505 aa17.98■□□□□ 0.47
CTSB-222ENST00000531551 TIE1P35590 1138 aa17.98■□□□□ 0.47
CTSB-222ENST00000531551 TNFRSF4P43489 277 aa17.98■□□□□ 0.47
CTSB-222ENST00000531551 GDF10P55107 478 aa17.98■□□□□ 0.47
CTSB-222ENST00000531551 GEMIN4P57678 1058 aaKnown RBP17.98■□□□□ 0.47
CTSB-222ENST00000531551 ZNF33AQ06730 810 aa17.98■□□□□ 0.47
CTSB-222ENST00000531551 FNDC3BQ53EP0 1204 aaKnown RBP17.98■□□□□ 0.47
CTSB-222ENST00000531551 TMCO4Q5TGY1 634 aa17.98■□□□□ 0.47
CTSB-222ENST00000531551 DRICH1Q6PGQ1 229 aaPredicted RBP17.98■□□□□ 0.47
CTSB-222ENST00000531551 CTAGE6Q86UF2 777 aa17.98■□□□□ 0.47
CTSB-222ENST00000531551 CTAGE4Q8IX94 777 aa17.98■□□□□ 0.47
CTSB-222ENST00000531551 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.98■□□□□ 0.47
CTSB-222ENST00000531551 CEP112Q8N8E3 955 aa17.98■□□□□ 0.47
CTSB-222ENST00000531551 ATL2Q8NHH9 583 aa17.98■□□□□ 0.47
CTSB-222ENST00000531551 EZH1Q92800 747 aaPredicted RBP17.98■□□□□ 0.47
CTSB-222ENST00000531551 SHDQ96IW2 340 aa17.98■□□□□ 0.47
CTSB-222ENST00000531551 CINPQ9BW66 212 aaPredicted RBP17.98■□□□□ 0.47
CTSB-222ENST00000531551 RRAGDQ9NQL2 400 aaPredicted RBP17.98■□□□□ 0.47
CTSB-222ENST00000531551 RBM22Q9NW64 420 aaKnown RBP eCLIP17.98■□□□□ 0.47
CTSB-222ENST00000531551 SHISA7A6NL88 538 aa17.97■□□□□ 0.47
CTSB-222ENST00000531551 SMAD6O43541 496 aaKnown RBP17.97■□□□□ 0.47
CTSB-222ENST00000531551 BNIP3LO60238 219 aa17.97■□□□□ 0.47
CTSB-222ENST00000531551 TMCC1O94876 653 aa17.97■□□□□ 0.47
CTSB-222ENST00000531551 CD160O95971 181 aa17.97■□□□□ 0.47
CTSB-222ENST00000531551 PEX11BO96011 259 aa17.97■□□□□ 0.47
CTSB-222ENST00000531551 ITGAVP06756 1048 aa17.97■□□□□ 0.47
CTSB-222ENST00000531551 SRCP12931 536 aa17.97■□□□□ 0.47
CTSB-222ENST00000531551 SERPINH1P50454 418 aaKnown RBP17.97■□□□□ 0.47
CTSB-222ENST00000531551 RENBPP51606 427 aa17.97■□□□□ 0.47
CTSB-222ENST00000531551 ITKQ08881 620 aa17.97■□□□□ 0.47
CTSB-222ENST00000531551 ZBTB17Q13105 803 aa17.97■□□□□ 0.47
CTSB-222ENST00000531551 ZNF235Q14590 738 aa17.97■□□□□ 0.47
CTSB-222ENST00000531551 UBXN2BQ14CS0 331 aa17.97■□□□□ 0.47
CTSB-222ENST00000531551 PTPRNQ16849 979 aa17.97■□□□□ 0.47
CTSB-222ENST00000531551 C2orf27AQ580R0 203 aa17.97■□□□□ 0.47
CTSB-222ENST00000531551 EGFLAMQ63HQ2 1017 aa17.97■□□□□ 0.47
CTSB-222ENST00000531551 BBS5Q8N3I7 341 aa17.97■□□□□ 0.47
CTSB-222ENST00000531551 ZNF513Q8N8E2 541 aaPredicted RBP17.97■□□□□ 0.47
CTSB-222ENST00000531551 ZNF599Q96NL3 588 aa17.97■□□□□ 0.47
CTSB-222ENST00000531551 AGAP3Q96P47 875 aa17.97■□□□□ 0.47
CTSB-222ENST00000531551 USP29Q9HBJ7 922 aa17.97■□□□□ 0.47
CTSB-222ENST00000531551 KLHL8Q9P2G9 620 aaPredicted RBP17.97■□□□□ 0.47
CTSB-222ENST00000531551 DRG1Q9Y295 367 aaKnown RBP17.97■□□□□ 0.47
CTSB-222ENST00000531551 A0A0A0MRY4 1105 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms