RNA–Protein interactions for RNA: ENST00000531326.1

PTPN11-204, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 4

Gene PTPN11, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-204ENST00000531326 MOCS2O96007 188 aaPredicted RBP18.38■□□□□ 0.53
PTPN11-204ENST00000531326 MYBL1P10243 752 aa18.38■□□□□ 0.53
PTPN11-204ENST00000531326 KRT3P12035 628 aa18.38■□□□□ 0.53
PTPN11-204ENST00000531326 TFE3P19532 575 aaPredicted RBP18.38■□□□□ 0.53
PTPN11-204ENST00000531326 RFC1P35251 1148 aaPredicted RBP18.38■□□□□ 0.53
PTPN11-204ENST00000531326 GRK6P43250 576 aa18.38■□□□□ 0.53
PTPN11-204ENST00000531326 IL9RQ01113 521 aa18.38■□□□□ 0.53
PTPN11-204ENST00000531326 MAMLD1Q13495 774 aa18.38■□□□□ 0.53
PTPN11-204ENST00000531326 CDH18Q13634 790 aa18.38■□□□□ 0.53
PTPN11-204ENST00000531326 GSE1Q14687 1217 aa18.38■□□□□ 0.53
PTPN11-204ENST00000531326 CST6Q15828 149 aa18.38■□□□□ 0.53
PTPN11-204ENST00000531326 NCEH1Q6PIU2 408 aa18.38■□□□□ 0.53
PTPN11-204ENST00000531326 TMEM139Q8IV31 216 aa18.38■□□□□ 0.53
PTPN11-204ENST00000531326 KDM1BQ8NB78 822 aa18.38■□□□□ 0.53
PTPN11-204ENST00000531326 GANCQ8TET4 914 aa18.38■□□□□ 0.53
PTPN11-204ENST00000531326 ZNF653Q96CK0 615 aa18.38■□□□□ 0.53
PTPN11-204ENST00000531326 SLC6A18Q96N87 628 aa18.38■□□□□ 0.53
PTPN11-204ENST00000531326 DDX50Q9BQ39 737 aaKnown RBP18.38■□□□□ 0.53
PTPN11-204ENST00000531326 NEUROG2Q9H2A3 272 aa18.38■□□□□ 0.53
PTPN11-204ENST00000531326 CNOT8Q9UFF9 292 aaKnown RBP18.38■□□□□ 0.53
PTPN11-204ENST00000531326 NCKAP1Q9Y2A7 1128 aa18.38■□□□□ 0.53
PTPN11-204ENST00000531326 GOLGA4Q13439 2230 aaKnown RBP18.38■□□□□ 0.53
PTPN11-204ENST00000531326 TYW5A2RUC4 315 aaKnown RBP18.37■□□□□ 0.53
PTPN11-204ENST00000531326 VILLO15195 856 aa18.37■□□□□ 0.53
PTPN11-204ENST00000531326 TNFSF14O43557 240 aa18.37■□□□□ 0.53
PTPN11-204ENST00000531326 LUC7L3O95232 432 aaKnown RBP18.37■□□□□ 0.53
PTPN11-204ENST00000531326 WNT1P04628 370 aa18.37■□□□□ 0.53
PTPN11-204ENST00000531326 ABCB4P21439 1286 aa18.37■□□□□ 0.53
PTPN11-204ENST00000531326 RACK1P63244 317 aaKnown RBP18.37■□□□□ 0.53
PTPN11-204ENST00000531326 BNIPLQ7Z465 357 aa18.37■□□□□ 0.53
PTPN11-204ENST00000531326 ADAT2Q7Z6V5 191 aaKnown RBP18.37■□□□□ 0.53
PTPN11-204ENST00000531326 MMAAQ8IVH4 418 aaKnown RBP18.37■□□□□ 0.53
PTPN11-204ENST00000531326 APCDD1Q8J025 514 aa18.37■□□□□ 0.53
PTPN11-204ENST00000531326 RXFP2Q8WXD0 754 aa18.37■□□□□ 0.53
PTPN11-204ENST00000531326 TRIM11Q96F44 468 aa18.37■□□□□ 0.53
PTPN11-204ENST00000531326 CFAP57Q96MR6 1250 aa18.37■□□□□ 0.53
PTPN11-204ENST00000531326 FAM129BQ96TA1 746 aa18.37■□□□□ 0.53
PTPN11-204ENST00000531326 TBCBQ99426 244 aa18.37■□□□□ 0.53
PTPN11-204ENST00000531326 PACSIN1Q9BY11 444 aa18.37■□□□□ 0.53
PTPN11-204ENST00000531326 THAP2Q9H0W7 228 aa18.37■□□□□ 0.53
PTPN11-204ENST00000531326 FAM204AQ9H8W3 233 aa18.37■□□□□ 0.53
PTPN11-204ENST00000531326 RRN3Q9NYV6 651 aa18.37■□□□□ 0.53
PTPN11-204ENST00000531326 SLCO3A1Q9UIG8 710 aa18.37■□□□□ 0.53
PTPN11-204ENST00000531326 STAP1Q9ULZ2 295 aa18.37■□□□□ 0.53
PTPN11-204ENST00000531326 SOWAHDA6NJG2 315 aa18.36■□□□□ 0.53
PTPN11-204ENST00000531326 GOLGA6L6A8MZA4 724 aa18.36■□□□□ 0.53
PTPN11-204ENST00000531326 M0QYT0 321 aa18.36■□□□□ 0.53
PTPN11-204ENST00000531326 RNASEH1O60930 286 aaKnown RBP18.36■□□□□ 0.53
PTPN11-204ENST00000531326 SRPRAP08240 638 aaKnown RBP18.36■□□□□ 0.53
PTPN11-204ENST00000531326 SULT1E1P49888 294 aa18.36■□□□□ 0.53
PTPN11-204ENST00000531326 RPL7AP62424 266 aaKnown RBP18.36■□□□□ 0.53
PTPN11-204ENST00000531326 CAMK2BQ13554 666 aa18.36■□□□□ 0.53
PTPN11-204ENST00000531326 COL28A1Q2UY09 1125 aa18.36■□□□□ 0.53
PTPN11-204ENST00000531326 SLC25A52Q3SY17 297 aa18.36■□□□□ 0.53
PTPN11-204ENST00000531326 CCDC14Q49A88 953 aa18.36■□□□□ 0.53
PTPN11-204ENST00000531326 ZC3H12AQ5D1E8 599 aaKnown RBP18.36■□□□□ 0.53
PTPN11-204ENST00000531326 PRAMEF14Q5SWL7 426 aa18.36■□□□□ 0.53
PTPN11-204ENST00000531326 RAP1GAP2Q684P5 730 aa18.36■□□□□ 0.53
PTPN11-204ENST00000531326 TMTC1Q8IUR5 882 aa18.36■□□□□ 0.53
PTPN11-204ENST00000531326 CCDC170Q8IYT3 715 aa18.36■□□□□ 0.53
PTPN11-204ENST00000531326 LGI2Q8N0V4 545 aa18.36■□□□□ 0.53
PTPN11-204ENST00000531326 AADATQ8N5Z0 425 aa18.36■□□□□ 0.53
PTPN11-204ENST00000531326 ARHGEF26Q96DR7 871 aa18.36■□□□□ 0.53
PTPN11-204ENST00000531326 PGAP3Q96FM1 320 aaPredicted RBP18.36■□□□□ 0.53
PTPN11-204ENST00000531326 RPL10LQ96L21 214 aaKnown RBP18.36■□□□□ 0.53
PTPN11-204ENST00000531326 MCEEQ96PE7 176 aa18.36■□□□□ 0.53
PTPN11-204ENST00000531326 ACE2Q9BYF1 805 aaPredicted RBP18.36■□□□□ 0.53
PTPN11-204ENST00000531326 PARVAQ9NVD7 372 aa18.36■□□□□ 0.53
PTPN11-204ENST00000531326 DDIT4Q9NX09 232 aa18.36■□□□□ 0.53
PTPN11-204ENST00000531326 RAXQ9Y2V3 346 aa18.36■□□□□ 0.53
PTPN11-204ENST00000531326 COL5A1P20908 1838 aaPredicted RBP18.35■□□□□ 0.53
PTPN11-204ENST00000531326 A0A1B0GTQ1 180 aa18.35■□□□□ 0.53
PTPN11-204ENST00000531326 EDDM13A0A1B0GTR0 161 aa18.35■□□□□ 0.53
PTPN11-204ENST00000531326 TARSL2A2RTX5 802 aaKnown RBP18.35■□□□□ 0.53
PTPN11-204ENST00000531326 FAM149AA5PLN7 773 aa18.35■□□□□ 0.53
PTPN11-204ENST00000531326 ANKRD62A6NC57 917 aa18.35■□□□□ 0.53
PTPN11-204ENST00000531326 WNT9AO14904 365 aa18.35■□□□□ 0.53
PTPN11-204ENST00000531326 RNASEH2AO75792 299 aaKnown RBP18.35■□□□□ 0.53
PTPN11-204ENST00000531326 LCA5LO95447 670 aa18.35■□□□□ 0.53
PTPN11-204ENST00000531326 CYP1A2P05177 515 aa18.35■□□□□ 0.53
PTPN11-204ENST00000531326 PDGFRAP16234 1089 aa18.35■□□□□ 0.53
PTPN11-204ENST00000531326 TACR2P21452 398 aa18.35■□□□□ 0.53
PTPN11-204ENST00000531326 SLC8A1P32418 973 aa18.35■□□□□ 0.53
PTPN11-204ENST00000531326 PTPN9P43378 593 aa18.35■□□□□ 0.53
PTPN11-204ENST00000531326 NUMBP49757 651 aa18.35■□□□□ 0.53
PTPN11-204ENST00000531326 STK19P49842 368 aaPredicted RBP18.35■□□□□ 0.53
PTPN11-204ENST00000531326 GSDMDP57764 484 aa18.35■□□□□ 0.53
PTPN11-204ENST00000531326 ECT2LQ008S8 904 aa18.35■□□□□ 0.53
PTPN11-204ENST00000531326 OGDHQ02218 1023 aa18.35■□□□□ 0.53
PTPN11-204ENST00000531326 SMAD1Q15797 465 aaKnown RBP18.35■□□□□ 0.53
PTPN11-204ENST00000531326 GATAD2AQ86YP4 633 aa18.35■□□□□ 0.53
PTPN11-204ENST00000531326 STK40Q8N2I9 435 aa18.35■□□□□ 0.53
PTPN11-204ENST00000531326 OR2T34Q8NGX1 318 aa18.35■□□□□ 0.53
PTPN11-204ENST00000531326 PTPRN2Q92932 1015 aa18.35■□□□□ 0.53
PTPN11-204ENST00000531326 BAG1Q99933 345 aaPredicted RBP18.35■□□□□ 0.53
PTPN11-204ENST00000531326 MYO1AQ9UBC5 1043 aa18.35■□□□□ 0.53
PTPN11-204ENST00000531326 DKK4Q9UBT3 224 aa18.35■□□□□ 0.53
PTPN11-204ENST00000531326 FZD4Q9ULV1 537 aa18.35■□□□□ 0.53
PTPN11-204ENST00000531326 SYNJ2BP-COX16A0A087WUM0 186 aa18.34■□□□□ 0.53
PTPN11-204ENST00000531326 A0A1W2PR77 199 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms