RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 CPA5Q8WXQ8 436 aa16.17■□□□□ 0.18
CPSF1-205ENST00000531042 CFAP57Q96MR6 1250 aa16.17■□□□□ 0.18
CPSF1-205ENST00000531042 HAPLN3Q96S86 360 aa16.17■□□□□ 0.18
CPSF1-205ENST00000531042 ERVMER34-1Q9H9K5 563 aa16.17■□□□□ 0.18
CPSF1-205ENST00000531042 TAB2Q9NYJ8 693 aa16.17■□□□□ 0.18
CPSF1-205ENST00000531042 DMTF1Q9Y222 760 aa16.17■□□□□ 0.18
CPSF1-205ENST00000531042 FARP1Q9Y4F1 1045 aaPredicted RBP16.17■□□□□ 0.18
CPSF1-205ENST00000531042 E9PAM4 449 aa16.16■□□□□ 0.18
CPSF1-205ENST00000531042 SMAD6O43541 496 aaKnown RBP16.16■□□□□ 0.18
CPSF1-205ENST00000531042 SRGAP2O75044 1071 aa16.16■□□□□ 0.18
CPSF1-205ENST00000531042 RRM1P23921 792 aa16.16■□□□□ 0.18
CPSF1-205ENST00000531042 EPHA8P29322 1005 aaPredicted RBP16.16■□□□□ 0.18
CPSF1-205ENST00000531042 OR1E1P30953 314 aa16.16■□□□□ 0.18
CPSF1-205ENST00000531042 CHRNA3P32297 505 aa16.16■□□□□ 0.18
CPSF1-205ENST00000531042 RXRGP48443 463 aa16.16■□□□□ 0.18
CPSF1-205ENST00000531042 ARRB1P49407 418 aaPredicted RBP16.16■□□□□ 0.18
CPSF1-205ENST00000531042 TAS2R38P59533 333 aa16.16■□□□□ 0.18
CPSF1-205ENST00000531042 SMAD1Q15797 465 aaKnown RBP16.16■□□□□ 0.18
CPSF1-205ENST00000531042 CCDC157Q569K6 752 aa16.16■□□□□ 0.18
CPSF1-205ENST00000531042 C6orf118Q5T5N4 469 aa16.16■□□□□ 0.18
CPSF1-205ENST00000531042 PIP5KL1Q5T9C9 394 aa16.16■□□□□ 0.18
CPSF1-205ENST00000531042 NAA35Q5VZE5 725 aa16.16■□□□□ 0.18
CPSF1-205ENST00000531042 IQCHQ86VS3 1027 aa16.16■□□□□ 0.18
CPSF1-205ENST00000531042 ZNF677Q86XU0 584 aa16.16■□□□□ 0.18
CPSF1-205ENST00000531042 SPATS2Q86XZ4 545 aaKnown RBP16.16■□□□□ 0.18
CPSF1-205ENST00000531042 MARCH9Q86YJ5 346 aa16.16■□□□□ 0.18
CPSF1-205ENST00000531042 DCAF4L2Q8NA75 395 aa16.16■□□□□ 0.18
CPSF1-205ENST00000531042 TMIEQ8NEW7 156 aa16.16■□□□□ 0.18
CPSF1-205ENST00000531042 MDM1Q8TC05 714 aa16.16■□□□□ 0.18
CPSF1-205ENST00000531042 ENOX1Q8TC92 643 aaKnown RBP16.16■□□□□ 0.18
CPSF1-205ENST00000531042 CCDC114Q96M63 670 aa16.16■□□□□ 0.18
CPSF1-205ENST00000531042 GANQ9H2C0 597 aa16.16■□□□□ 0.18
CPSF1-205ENST00000531042 PREBQ9HCU5 417 aa16.16■□□□□ 0.18
CPSF1-205ENST00000531042 ZNF212Q9UDV6 495 aa16.16■□□□□ 0.18
CPSF1-205ENST00000531042 NOCTQ9UK39 431 aaKnown RBP16.16■□□□□ 0.18
CPSF1-205ENST00000531042 ILVBLA1L0T0 632 aa16.15■□□□□ 0.18
CPSF1-205ENST00000531042 ENC1O14682 589 aa16.15■□□□□ 0.18
CPSF1-205ENST00000531042 MAGEC1O60732 1142 aa16.15■□□□□ 0.18
CPSF1-205ENST00000531042 ENDOD1O94919 500 aa16.15■□□□□ 0.18
CPSF1-205ENST00000531042 LDOC1O95751 146 aaPredicted RBP16.15■□□□□ 0.18
CPSF1-205ENST00000531042 GLDCP23378 1020 aa16.15■□□□□ 0.18
CPSF1-205ENST00000531042 CLCN6P51797 869 aa16.15■□□□□ 0.18
CPSF1-205ENST00000531042 OVGP1Q12889 678 aa16.15■□□□□ 0.18
CPSF1-205ENST00000531042 BNIP3Q12983 259 aa16.15■□□□□ 0.18
CPSF1-205ENST00000531042 SETMARQ53H47 684 aaPredicted RBP16.15■□□□□ 0.18
CPSF1-205ENST00000531042 DHRS13Q6UX07 377 aa16.15■□□□□ 0.18
CPSF1-205ENST00000531042 LINGO4Q6UY18 593 aa16.15■□□□□ 0.18
CPSF1-205ENST00000531042 FAM131BQ86XD5 332 aa16.15■□□□□ 0.18
CPSF1-205ENST00000531042 OXR1Q8N573 874 aa16.15■□□□□ 0.18
CPSF1-205ENST00000531042 EID2Q8N6I1 236 aa16.15■□□□□ 0.18
CPSF1-205ENST00000531042 OR7D4Q8NG98 312 aa16.15■□□□□ 0.18
CPSF1-205ENST00000531042 SLC20A1Q8WUM9 679 aa16.15■□□□□ 0.18
CPSF1-205ENST00000531042 ARRDC3Q96B67 414 aa16.15■□□□□ 0.18
CPSF1-205ENST00000531042 CNDP2Q96KP4 475 aaKnown RBP16.15■□□□□ 0.18
CPSF1-205ENST00000531042 VPS16Q9H269 839 aa16.15■□□□□ 0.18
CPSF1-205ENST00000531042 ZFYVE26Q68DK2 2539 aa16.14■□□□□ 0.17
CPSF1-205ENST00000531042 FAM149AA5PLN7 773 aa16.14■□□□□ 0.17
CPSF1-205ENST00000531042 PRAMEF26H0Y7S4 382 aa16.14■□□□□ 0.17
CPSF1-205ENST00000531042 CBX4O00257 560 aa16.14■□□□□ 0.17
CPSF1-205ENST00000531042 KPNA3O00505 521 aaPredicted RBP16.14■□□□□ 0.17
CPSF1-205ENST00000531042 RNGTTO60942 597 aaKnown RBP16.14■□□□□ 0.17
CPSF1-205ENST00000531042 GFPT2O94808 682 aa16.14■□□□□ 0.17
CPSF1-205ENST00000531042 PRNPP04156 253 aa16.14■□□□□ 0.17
CPSF1-205ENST00000531042 KLK7P49862 253 aa16.14■□□□□ 0.17
CPSF1-205ENST00000531042 CCDC15Q0P6D6 951 aa16.14■□□□□ 0.17
CPSF1-205ENST00000531042 CAMK2BQ13554 666 aa16.14■□□□□ 0.17
CPSF1-205ENST00000531042 STAT4Q14765 748 aa16.14■□□□□ 0.17
CPSF1-205ENST00000531042 CDKAL1Q5VV42 579 aa16.14■□□□□ 0.17
CPSF1-205ENST00000531042 NEK5Q6P3R8 708 aa16.14■□□□□ 0.17
CPSF1-205ENST00000531042 C22orf39Q6P5X5 142 aa16.14■□□□□ 0.17
CPSF1-205ENST00000531042 ZNF783Q6ZMS7 281 aa16.14■□□□□ 0.17
CPSF1-205ENST00000531042 CLEC17AQ6ZS10 378 aa16.14■□□□□ 0.17
CPSF1-205ENST00000531042 KANSL1Q7Z3B3 1105 aa16.14■□□□□ 0.17
CPSF1-205ENST00000531042 EMC1Q8N766 993 aa16.14■□□□□ 0.17
CPSF1-205ENST00000531042 CHST14Q8NCH0 376 aa16.14■□□□□ 0.17
CPSF1-205ENST00000531042 ZYG11BQ9C0D3 744 aa16.14■□□□□ 0.17
CPSF1-205ENST00000531042 METTL5Q9NRN9 209 aaKnown RBP16.14■□□□□ 0.17
CPSF1-205ENST00000531042 LMBRD1Q9NUN5 540 aa16.14■□□□□ 0.17
CPSF1-205ENST00000531042 DKK4Q9UBT3 224 aa16.14■□□□□ 0.17
CPSF1-205ENST00000531042 LHX6Q9UPM6 363 aa16.14■□□□□ 0.17
CPSF1-205ENST00000531042 PCDHGA1Q9Y5H4 931 aa16.14■□□□□ 0.17
CPSF1-205ENST00000531042 TRABD2BA6NFA1 517 aa16.13■□□□□ 0.17
CPSF1-205ENST00000531042 RNF103O00237 685 aa16.13■□□□□ 0.17
CPSF1-205ENST00000531042 ZNF821O75541 412 aaPredicted RBP16.13■□□□□ 0.17
CPSF1-205ENST00000531042 ZMPSTE24O75844 475 aa16.13■□□□□ 0.17
CPSF1-205ENST00000531042 CYP1A1P04798 512 aaPredicted RBP16.13■□□□□ 0.17
CPSF1-205ENST00000531042 CHRNB2P17787 502 aa16.13■□□□□ 0.17
CPSF1-205ENST00000531042 MMP8P22894 467 aa16.13■□□□□ 0.17
CPSF1-205ENST00000531042 ATP11AP98196 1134 aa16.13■□□□□ 0.17
CPSF1-205ENST00000531042 FMO1Q01740 532 aa16.13■□□□□ 0.17
CPSF1-205ENST00000531042 CDR2Q01850 454 aa16.13■□□□□ 0.17
CPSF1-205ENST00000531042 DNAJC3Q13217 504 aa16.13■□□□□ 0.17
CPSF1-205ENST00000531042 KRT31Q15323 416 aa16.13■□□□□ 0.17
CPSF1-205ENST00000531042 RAB6CQ53S08 254 aa16.13■□□□□ 0.17
CPSF1-205ENST00000531042 ARSIQ5FYB1 569 aa16.13■□□□□ 0.17
CPSF1-205ENST00000531042 SFMBT2Q5VUG0 894 aa16.13■□□□□ 0.17
CPSF1-205ENST00000531042 RETSATQ6NUM9 610 aa16.13■□□□□ 0.17
CPSF1-205ENST00000531042 TMEM145Q8NBT3 493 aa16.13■□□□□ 0.17
CPSF1-205ENST00000531042 SPON2Q9BUD6 331 aa16.13■□□□□ 0.17
CPSF1-205ENST00000531042 HDAC8Q9BY41 377 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms